RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 C5orf60A6NFR6 353 aa8.57□□□□□ -1.04
TRIM48-201ENST00000417545 CHURC1-FNTBB4DL54 471 aa8.57□□□□□ -1.04
TRIM48-201ENST00000417545 PDE2AO00408 941 aaPredicted RBP8.57□□□□□ -1.04
TRIM48-201ENST00000417545 NDC80O14777 642 aa8.57□□□□□ -1.04
TRIM48-201ENST00000417545 PSMD3O43242 534 aa8.57□□□□□ -1.04
TRIM48-201ENST00000417545 LAMTOR5O43504 91 aa8.57□□□□□ -1.04
TRIM48-201ENST00000417545 PMPCBO75439 489 aa8.57□□□□□ -1.04
TRIM48-201ENST00000417545 ADH1BP00325 375 aa8.57□□□□□ -1.04
TRIM48-201ENST00000417545 CPP00450 1065 aa8.57□□□□□ -1.04
TRIM48-201ENST00000417545 UGT2B4P06133 528 aa8.57□□□□□ -1.04
TRIM48-201ENST00000417545 PSMB4P28070 264 aa8.57□□□□□ -1.04
TRIM48-201ENST00000417545 FDFT1P37268 417 aa8.57□□□□□ -1.04
TRIM48-201ENST00000417545 CLCN5P51795 746 aa8.57□□□□□ -1.04
TRIM48-201ENST00000417545 NSUN2Q08J23 767 aaKnown RBP eCLIP8.57□□□□□ -1.04
TRIM48-201ENST00000417545 TRIP13Q15645 432 aaPredicted RBP8.57□□□□□ -1.04
TRIM48-201ENST00000417545 CYP1B1Q16678 543 aa8.57□□□□□ -1.04
TRIM48-201ENST00000417545 MYLK3Q32MK0 819 aa8.57□□□□□ -1.04
TRIM48-201ENST00000417545 RALGPS1Q5JS13 557 aa8.57□□□□□ -1.04
TRIM48-201ENST00000417545 CWF19L1Q69YN2 538 aaKnown RBP8.57□□□□□ -1.04
TRIM48-201ENST00000417545 GDPD4Q6W3E5 623 aa8.57□□□□□ -1.04
TRIM48-201ENST00000417545 DPY19L3Q6ZPD9 716 aa8.57□□□□□ -1.04
TRIM48-201ENST00000417545 SYDE1Q6ZW31 735 aaPredicted RBP8.57□□□□□ -1.04
TRIM48-201ENST00000417545 SYT13Q7L8C5 426 aa8.57□□□□□ -1.04
TRIM48-201ENST00000417545 MMAAQ8IVH4 418 aaKnown RBP8.57□□□□□ -1.04
TRIM48-201ENST00000417545 NDUFAF2Q8N183 169 aa8.57□□□□□ -1.04
TRIM48-201ENST00000417545 TEX26Q8N6G2 289 aa8.57□□□□□ -1.04
TRIM48-201ENST00000417545 OR2T3Q8NH03 318 aa8.57□□□□□ -1.04
TRIM48-201ENST00000417545 PIP4K2CQ8TBX8 421 aa8.57□□□□□ -1.04
TRIM48-201ENST00000417545 SIPA1Q96FS4 1042 aa8.57□□□□□ -1.04
TRIM48-201ENST00000417545 LRIG1Q96JA1 1093 aa8.57□□□□□ -1.04
TRIM48-201ENST00000417545 TEKT5Q96M29 485 aa8.57□□□□□ -1.04
TRIM48-201ENST00000417545 HS3ST6Q96QI5 342 aa8.57□□□□□ -1.04
TRIM48-201ENST00000417545 HHIPQ96QV1 700 aa8.57□□□□□ -1.04
TRIM48-201ENST00000417545 TUBGCP5Q96RT8 1024 aa8.57□□□□□ -1.04
TRIM48-201ENST00000417545 RBM15Q96T37 977 aaKnown RBP eCLIP8.57□□□□□ -1.04
TRIM48-201ENST00000417545 GABRG3Q99928 467 aa8.57□□□□□ -1.04
TRIM48-201ENST00000417545 OMDQ99983 421 aa8.57□□□□□ -1.04
TRIM48-201ENST00000417545 MGME1Q9BQP7 344 aa8.57□□□□□ -1.04
TRIM48-201ENST00000417545 RAB17Q9H0T7 212 aa8.57□□□□□ -1.04
TRIM48-201ENST00000417545 SLC25A51Q9H1U9 297 aa8.57□□□□□ -1.04
TRIM48-201ENST00000417545 TMEM245Q9H330 911 aa8.57□□□□□ -1.04
TRIM48-201ENST00000417545 PCDH9Q9HC56 1237 aa8.57□□□□□ -1.04
TRIM48-201ENST00000417545 PRSS16Q9NQE7 514 aa8.57□□□□□ -1.04
TRIM48-201ENST00000417545 AAR2Q9Y312 384 aaKnown RBP8.57□□□□□ -1.04
TRIM48-201ENST00000417545 UTP11Q9Y3A2 253 aaKnown RBP8.57□□□□□ -1.04
TRIM48-201ENST00000417545 CKAP5Q14008 2032 aa8.56□□□□□ -1.04
TRIM48-201ENST00000417545 A0A1W2PQ67 120 aa8.56□□□□□ -1.04
TRIM48-201ENST00000417545 TTC24A2A3L6 582 aaPredicted RBP8.56□□□□□ -1.04
TRIM48-201ENST00000417545 NEMP1O14524 444 aa8.56□□□□□ -1.04
TRIM48-201ENST00000417545 GCATO75600 419 aa8.56□□□□□ -1.04
TRIM48-201ENST00000417545 LEFTY1O75610 366 aa8.56□□□□□ -1.04
TRIM48-201ENST00000417545 PIGNO95427 931 aa8.56□□□□□ -1.04
TRIM48-201ENST00000417545 APBB3O95704 486 aa8.56□□□□□ -1.04
TRIM48-201ENST00000417545 CD160O95971 181 aa8.56□□□□□ -1.04
TRIM48-201ENST00000417545 PEX11BO96011 259 aa8.56□□□□□ -1.04
TRIM48-201ENST00000417545 ADCY8P40145 1251 aa8.56□□□□□ -1.04
TRIM48-201ENST00000417545 CXCL12P48061 93 aa8.56□□□□□ -1.04
TRIM48-201ENST00000417545 CSNK1DP48730 415 aa8.56□□□□□ -1.04
TRIM48-201ENST00000417545 GDF10P55107 478 aa8.56□□□□□ -1.04
TRIM48-201ENST00000417545 SARNPP82979 210 aaKnown RBP8.56□□□□□ -1.04
TRIM48-201ENST00000417545 WASHC5Q12768 1159 aa8.56□□□□□ -1.04
TRIM48-201ENST00000417545 GPS1Q13098 491 aa8.56□□□□□ -1.04
TRIM48-201ENST00000417545 MTAPQ13126 283 aa8.56□□□□□ -1.04
TRIM48-201ENST00000417545 CALCOCO2Q13137 446 aa8.56□□□□□ -1.04
TRIM48-201ENST00000417545 CAMK2GQ13555 558 aaPredicted RBP8.56□□□□□ -1.04
TRIM48-201ENST00000417545 CRY1Q16526 586 aa8.56□□□□□ -1.04
TRIM48-201ENST00000417545 PARP6Q2NL67 630 aa8.56□□□□□ -1.04
TRIM48-201ENST00000417545 POM121L1PQ3SYA9 428 aa8.56□□□□□ -1.04
TRIM48-201ENST00000417545 ARSIQ5FYB1 569 aa8.56□□□□□ -1.04
TRIM48-201ENST00000417545 C9orf64Q5T6V5 341 aa8.56□□□□□ -1.04
TRIM48-201ENST00000417545 ARMC12Q5T9G4 340 aa8.56□□□□□ -1.04
TRIM48-201ENST00000417545 FAXCQ5TGI0 409 aa8.56□□□□□ -1.04
TRIM48-201ENST00000417545 ANO7Q6IWH7 933 aa8.56□□□□□ -1.04
TRIM48-201ENST00000417545 TTC27Q6P3X3 843 aa8.56□□□□□ -1.04
TRIM48-201ENST00000417545 FBXL19Q6PCT2 694 aa8.56□□□□□ -1.04
TRIM48-201ENST00000417545 PPP1R21Q6ZMI0 780 aa8.56□□□□□ -1.04
TRIM48-201ENST00000417545 PLPP6Q8IY26 295 aa8.56□□□□□ -1.04
TRIM48-201ENST00000417545 FBXL6Q8N531 539 aa8.56□□□□□ -1.04
TRIM48-201ENST00000417545 CHST14Q8NCH0 376 aa8.56□□□□□ -1.04
TRIM48-201ENST00000417545 IPMKQ8NFU5 416 aa8.56□□□□□ -1.04
TRIM48-201ENST00000417545 OR2A12Q8NGT7 310 aa8.56□□□□□ -1.04
TRIM48-201ENST00000417545 FRS2Q8WU20 508 aa8.56□□□□□ -1.04
TRIM48-201ENST00000417545 PTPRN2Q92932 1015 aa8.56□□□□□ -1.04
TRIM48-201ENST00000417545 CLDN23Q96B33 292 aa8.56□□□□□ -1.04
TRIM48-201ENST00000417545 RMDN1Q96DB5 314 aa8.56□□□□□ -1.04
TRIM48-201ENST00000417545 MYO19Q96H55 970 aa8.56□□□□□ -1.04
TRIM48-201ENST00000417545 ADGRE3Q9BY15 652 aa8.56□□□□□ -1.04
TRIM48-201ENST00000417545 TRIM31Q9BZY9 425 aa8.56□□□□□ -1.04
TRIM48-201ENST00000417545 RAB6BQ9NRW1 208 aa8.56□□□□□ -1.04
TRIM48-201ENST00000417545 UBP1Q9NZI7 540 aa8.56□□□□□ -1.04
TRIM48-201ENST00000417545 PCYOX1Q9UHG3 505 aa8.56□□□□□ -1.04
TRIM48-201ENST00000417545 FAM153AQ9UHL3 310 aa8.56□□□□□ -1.04
TRIM48-201ENST00000417545 SCML1Q9UN30 329 aa8.56□□□□□ -1.04
TRIM48-201ENST00000417545 ATP8A1Q9Y2Q0 1164 aa8.56□□□□□ -1.04
TRIM48-201ENST00000417545 MYO18AQ92614 2054 aaKnown RBP8.56□□□□□ -1.04
TRIM48-201ENST00000417545 FAM86C2PA6NEL3 165 aa8.55□□□□□ -1.04
TRIM48-201ENST00000417545 ANTXRLA6NF34 631 aa8.55□□□□□ -1.04
TRIM48-201ENST00000417545 FAM187AA6NFU0 413 aa8.55□□□□□ -1.04
TRIM48-201ENST00000417545 SHISA7A6NL88 538 aa8.55□□□□□ -1.04
TRIM48-201ENST00000417545 EFCAB8A8MWE9 144 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms