RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 ACP1P24666 158 aa17.84■□□□□ 0.45
PDLIM2-208ENST00000416159 RABIFP47224 123 aa17.84■□□□□ 0.45
PDLIM2-208ENST00000416159 RHOAP61586 193 aa17.84■□□□□ 0.45
PDLIM2-208ENST00000416159 OGDHQ02218 1023 aa17.84■□□□□ 0.45
PDLIM2-208ENST00000416159 CYP4F3Q08477 520 aa17.84■□□□□ 0.45
PDLIM2-208ENST00000416159 ASIC2Q16515 512 aa17.84■□□□□ 0.45
PDLIM2-208ENST00000416159 ATXN7L2Q5T6C5 722 aaPredicted RBP17.84■□□□□ 0.45
PDLIM2-208ENST00000416159 PLEKHA7Q6IQ23 1121 aa17.84■□□□□ 0.45
PDLIM2-208ENST00000416159 GDPD4Q6W3E5 623 aa17.84■□□□□ 0.45
PDLIM2-208ENST00000416159 DENND6BQ8NEG7 585 aa17.84■□□□□ 0.45
PDLIM2-208ENST00000416159 OR4C6Q8NH72 309 aa17.84■□□□□ 0.45
PDLIM2-208ENST00000416159 EIF3CQ99613 913 aaKnown RBP17.84■□□□□ 0.45
PDLIM2-208ENST00000416159 KLC2Q9H0B6 622 aa17.84■□□□□ 0.45
PDLIM2-208ENST00000416159 AIPL1Q9NZN9 384 aa17.84■□□□□ 0.45
PDLIM2-208ENST00000416159 MFHAS1Q9Y4C4 1052 aa17.84■□□□□ 0.45
PDLIM2-208ENST00000416159 POM121BA6NF01 834 aa17.83■□□□□ 0.44
PDLIM2-208ENST00000416159 NEMP2A6NFY4 417 aa17.83■□□□□ 0.44
PDLIM2-208ENST00000416159 TRIM38O00635 465 aa17.83■□□□□ 0.44
PDLIM2-208ENST00000416159 RAD51BO15315 384 aa17.83■□□□□ 0.44
PDLIM2-208ENST00000416159 ALPPL2P10696 532 aa17.83■□□□□ 0.44
PDLIM2-208ENST00000416159 PSMA2P25787 234 aa17.83■□□□□ 0.44
PDLIM2-208ENST00000416159 ZNF165P49910 485 aa17.83■□□□□ 0.44
PDLIM2-208ENST00000416159 TPI1P60174 286 aa17.83■□□□□ 0.44
PDLIM2-208ENST00000416159 HNRNPKP61978 463 aaKnown RBP eCLIP17.83■□□□□ 0.44
PDLIM2-208ENST00000416159 TTC7BQ86TV6 843 aa17.83■□□□□ 0.44
PDLIM2-208ENST00000416159 SLC22A18ASQ8N1D0 253 aa17.83■□□□□ 0.44
PDLIM2-208ENST00000416159 CACTIN-AS1Q8N1I8 211 aa17.83■□□□□ 0.44
PDLIM2-208ENST00000416159 VOPP1Q96AW1 172 aa17.83■□□□□ 0.44
PDLIM2-208ENST00000416159 KLF6Q99612 283 aaPredicted RBP17.83■□□□□ 0.44
PDLIM2-208ENST00000416159 EDEM3Q9BZQ6 932 aa17.83■□□□□ 0.44
PDLIM2-208ENST00000416159 HAUS4Q9H6D7 363 aa17.83■□□□□ 0.44
PDLIM2-208ENST00000416159 GPR27Q9NS67 375 aa17.83■□□□□ 0.44
PDLIM2-208ENST00000416159 UCKL1Q9NWZ5 548 aa17.83■□□□□ 0.44
PDLIM2-208ENST00000416159 DKK3Q9UBP4 350 aa17.83■□□□□ 0.44
PDLIM2-208ENST00000416159 IPO11Q9UI26 975 aaKnown RBP17.83■□□□□ 0.44
PDLIM2-208ENST00000416159 APC2O95996 2303 aa17.83■□□□□ 0.44
PDLIM2-208ENST00000416159 SPTY2D1-AS1A0A0U1RR47 76 aa17.82■□□□□ 0.44
PDLIM2-208ENST00000416159 A0A1B0GTH6 734 aa17.82■□□□□ 0.44
PDLIM2-208ENST00000416159 AREL1O15033 823 aa17.82■□□□□ 0.44
PDLIM2-208ENST00000416159 PRKCIP41743 596 aa17.82■□□□□ 0.44
PDLIM2-208ENST00000416159 NDST2P52849 883 aa17.82■□□□□ 0.44
PDLIM2-208ENST00000416159 DAB2P98082 770 aa17.82■□□□□ 0.44
PDLIM2-208ENST00000416159 E2F1Q01094 437 aa17.82■□□□□ 0.44
PDLIM2-208ENST00000416159 ERMARDQ5T6L9 678 aa17.82■□□□□ 0.44
PDLIM2-208ENST00000416159 HES3Q5TGS1 186 aa17.82■□□□□ 0.44
PDLIM2-208ENST00000416159 CAVIN1Q6NZI2 390 aaKnown RBP17.82■□□□□ 0.44
PDLIM2-208ENST00000416159 ZNF571Q7Z3V5 609 aaPredicted RBP17.82■□□□□ 0.44
PDLIM2-208ENST00000416159 HCAR2Q8TDS4 363 aa17.82■□□□□ 0.44
PDLIM2-208ENST00000416159 CPEB1Q9BZB8 566 aaKnown RBP17.82■□□□□ 0.44
PDLIM2-208ENST00000416159 DNAJC28Q9NX36 388 aa17.82■□□□□ 0.44
PDLIM2-208ENST00000416159 UBA2Q9UBT2 640 aaPredicted RBP17.82■□□□□ 0.44
PDLIM2-208ENST00000416159 RALYQ9UKM9 306 aaKnown RBP17.82■□□□□ 0.44
PDLIM2-208ENST00000416159 LHX6Q9UPM6 363 aa17.82■□□□□ 0.44
PDLIM2-208ENST00000416159 AP4E1Q9UPM8 1137 aa17.82■□□□□ 0.44
PDLIM2-208ENST00000416159 PKD1L2Q7Z442 2459 aa17.81■□□□□ 0.44
PDLIM2-208ENST00000416159 CHD6Q8TD26 2715 aa17.81■□□□□ 0.44
PDLIM2-208ENST00000416159 TMEM191CA6NGB0 347 aa17.81■□□□□ 0.44
PDLIM2-208ENST00000416159 ARHGAP42A6NI28 874 aa17.81■□□□□ 0.44
PDLIM2-208ENST00000416159 H3BM21 787 aa17.81■□□□□ 0.44
PDLIM2-208ENST00000416159 EEF2KO00418 725 aaKnown RBP17.81■□□□□ 0.44
PDLIM2-208ENST00000416159 FFAR2O15552 330 aa17.81■□□□□ 0.44
PDLIM2-208ENST00000416159 RNF8O76064 485 aa17.81■□□□□ 0.44
PDLIM2-208ENST00000416159 FTLP02792 175 aaPredicted RBP17.81■□□□□ 0.44
PDLIM2-208ENST00000416159 SUOXP51687 545 aa17.81■□□□□ 0.44
PDLIM2-208ENST00000416159 KLHL30Q0D2K2 578 aa17.81■□□□□ 0.44
PDLIM2-208ENST00000416159 FZD2Q14332 565 aa17.81■□□□□ 0.44
PDLIM2-208ENST00000416159 GRM3Q14832 879 aa17.81■□□□□ 0.44
PDLIM2-208ENST00000416159 CYTH1Q15438 398 aa17.81■□□□□ 0.44
PDLIM2-208ENST00000416159 PARGQ86W56 976 aa17.81■□□□□ 0.44
PDLIM2-208ENST00000416159 FNIP1Q8TF40 1166 aa17.81■□□□□ 0.44
PDLIM2-208ENST00000416159 RFFLQ8WZ73 363 aa17.81■□□□□ 0.44
PDLIM2-208ENST00000416159 NAP1L5Q96NT1 182 aaPredicted RBP17.81■□□□□ 0.44
PDLIM2-208ENST00000416159 NCAPGQ9BPX3 1015 aa17.81■□□□□ 0.44
PDLIM2-208ENST00000416159 DUSP23Q9BVJ7 150 aa17.81■□□□□ 0.44
PDLIM2-208ENST00000416159 DHX35Q9H5Z1 703 aaKnown RBP17.81■□□□□ 0.44
PDLIM2-208ENST00000416159 LRRC19Q9H756 370 aa17.81■□□□□ 0.44
PDLIM2-208ENST00000416159 GPATCH2LQ9NWQ4 482 aa17.81■□□□□ 0.44
PDLIM2-208ENST00000416159 NLGN3Q9NZ94 848 aa17.81■□□□□ 0.44
PDLIM2-208ENST00000416159 LHX3Q9UBR4 397 aa17.81■□□□□ 0.44
PDLIM2-208ENST00000416159 GGT7Q9UJ14 662 aa17.81■□□□□ 0.44
PDLIM2-208ENST00000416159 ITM2BQ9Y287 266 aa17.81■□□□□ 0.44
PDLIM2-208ENST00000416159 RAXQ9Y2V3 346 aa17.81■□□□□ 0.44
PDLIM2-208ENST00000416159 GPSM3Q9Y4H4 160 aa17.81■□□□□ 0.44
PDLIM2-208ENST00000416159 SCAMP1O15126 338 aa17.8■□□□□ 0.44
PDLIM2-208ENST00000416159 SPINT1O43278 529 aa17.8■□□□□ 0.44
PDLIM2-208ENST00000416159 DAPK3O43293 454 aa17.8■□□□□ 0.44
PDLIM2-208ENST00000416159 ATMINO43313 823 aaPredicted RBP17.8■□□□□ 0.44
PDLIM2-208ENST00000416159 TM7SF2O76062 418 aa17.8■□□□□ 0.44
PDLIM2-208ENST00000416159 SERPINC1P01008 464 aa17.8■□□□□ 0.44
PDLIM2-208ENST00000416159 CSF2P04141 144 aa17.8■□□□□ 0.44
PDLIM2-208ENST00000416159 GIMD1P0DJR0 217 aa17.8■□□□□ 0.44
PDLIM2-208ENST00000416159 TIMP2P16035 220 aa17.8■□□□□ 0.44
PDLIM2-208ENST00000416159 XPAP23025 273 aaPredicted RBP17.8■□□□□ 0.44
PDLIM2-208ENST00000416159 ZNF135P52742 658 aaPredicted RBP17.8■□□□□ 0.44
PDLIM2-208ENST00000416159 CLDN6P56747 220 aa17.8■□□□□ 0.44
PDLIM2-208ENST00000416159 PFN3P60673 137 aa17.8■□□□□ 0.44
PDLIM2-208ENST00000416159 TARDBPQ13148 414 aaKnown RBP eCLIP17.8■□□□□ 0.44
PDLIM2-208ENST00000416159 PDE1CQ14123 709 aaPredicted RBP17.8■□□□□ 0.44
PDLIM2-208ENST00000416159 IQCB1Q15051 598 aa17.8■□□□□ 0.44
PDLIM2-208ENST00000416159 ZNF542PQ5EBM4 170 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms