RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 DNAJC3Q13217 504 aa25.34■■□□□ 1.65
HLA-C-204ENST00000415537 HS1BP3Q53T59 392 aa25.34■■□□□ 1.65
HLA-C-204ENST00000415537 GCNT7Q6ZNI0 430 aa25.34■■□□□ 1.65
HLA-C-204ENST00000415537 Q6ZSR6 202 aa25.34■■□□□ 1.65
HLA-C-204ENST00000415537 PTAR1Q7Z6K3 402 aaPredicted RBP25.34■■□□□ 1.65
HLA-C-204ENST00000415537 ABI3BPQ7Z7G0 1075 aa25.34■■□□□ 1.65
HLA-C-204ENST00000415537 TTC7BQ86TV6 843 aa25.34■■□□□ 1.65
HLA-C-204ENST00000415537 DCP2Q8IU60 420 aaKnown RBP25.34■■□□□ 1.65
HLA-C-204ENST00000415537 FNIP1Q8TF40 1166 aa25.34■■□□□ 1.65
HLA-C-204ENST00000415537 MRPL47Q9HD33 250 aaKnown RBP25.34■■□□□ 1.65
HLA-C-204ENST00000415537 KLHL11Q9NVR0 708 aa25.34■■□□□ 1.65
HLA-C-204ENST00000415537 MYO1AQ9UBC5 1043 aa25.34■■□□□ 1.65
HLA-C-204ENST00000415537 UBA2Q9UBT2 640 aaPredicted RBP25.34■■□□□ 1.65
HLA-C-204ENST00000415537 GOLGA6L19H0YKK7 550 aa25.33■■□□□ 1.65
HLA-C-204ENST00000415537 RFPL3O75679 317 aa25.33■■□□□ 1.65
HLA-C-204ENST00000415537 C1SP09871 688 aa25.33■■□□□ 1.65
HLA-C-204ENST00000415537 ABL2P42684 1182 aa25.33■■□□□ 1.65
HLA-C-204ENST00000415537 NDST2P52849 883 aa25.33■■□□□ 1.65
HLA-C-204ENST00000415537 UBASH3AP57075 661 aa25.33■■□□□ 1.65
HLA-C-204ENST00000415537 SMAD1Q15797 465 aaKnown RBP25.33■■□□□ 1.65
HLA-C-204ENST00000415537 TDRD12Q587J7 1177 aaKnown RBP25.33■■□□□ 1.65
HLA-C-204ENST00000415537 NETO2Q8NC67 525 aa25.33■■□□□ 1.65
HLA-C-204ENST00000415537 NCAPGQ9BPX3 1015 aa25.33■■□□□ 1.65
HLA-C-204ENST00000415537 SNRNP25Q9BV90 132 aaKnown RBP25.33■■□□□ 1.65
HLA-C-204ENST00000415537 IGLON5A6NGN9 336 aa25.32■■□□□ 1.64
HLA-C-204ENST00000415537 ARHGAP42A6NI28 874 aa25.32■■□□□ 1.64
HLA-C-204ENST00000415537 SRRM3A6NNA2 597 aaPredicted RBP25.32■■□□□ 1.64
HLA-C-204ENST00000415537 FPGTO14772 594 aa25.32■■□□□ 1.64
HLA-C-204ENST00000415537 FGL2Q14314 439 aa25.32■■□□□ 1.64
HLA-C-204ENST00000415537 KANSL1Q7Z3B3 1105 aa25.32■■□□□ 1.64
HLA-C-204ENST00000415537 ARFGAP1Q8N6T3 406 aa25.32■■□□□ 1.64
HLA-C-204ENST00000415537 CELF6Q96J87 481 aaKnown RBP25.32■■□□□ 1.64
HLA-C-204ENST00000415537 BMFQ96LC9 184 aa25.32■■□□□ 1.64
HLA-C-204ENST00000415537 LENG8Q96PV6 779 aaPredicted RBP25.32■■□□□ 1.64
HLA-C-204ENST00000415537 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP25.32■■□□□ 1.64
HLA-C-204ENST00000415537 CCDC86Q9H6F5 360 aaKnown RBP25.32■■□□□ 1.64
HLA-C-204ENST00000415537 LRRC19Q9H756 370 aa25.32■■□□□ 1.64
HLA-C-204ENST00000415537 MFHAS1Q9Y4C4 1052 aa25.32■■□□□ 1.64
HLA-C-204ENST00000415537 BZW2Q9Y6E2 419 aaKnown RBP25.32■■□□□ 1.64
HLA-C-204ENST00000415537 WDFY3Q8IZQ1 3526 aa25.32■■□□□ 1.64
HLA-C-204ENST00000415537 MIPP30301 263 aa25.31■■□□□ 1.64
HLA-C-204ENST00000415537 CA9Q16790 459 aa25.31■■□□□ 1.64
HLA-C-204ENST00000415537 PPP6R3Q5H9R7 873 aaPredicted RBP25.31■■□□□ 1.64
HLA-C-204ENST00000415537 KYAT3Q6YP21 454 aaKnown RBP25.31■■□□□ 1.64
HLA-C-204ENST00000415537 VPS36Q86VN1 386 aa25.31■■□□□ 1.64
HLA-C-204ENST00000415537 PEBP4Q96S96 227 aa25.31■■□□□ 1.64
HLA-C-204ENST00000415537 C1QTNF2Q9BXJ5 285 aa25.31■■□□□ 1.64
HLA-C-204ENST00000415537 CPEB1Q9BZB8 566 aaKnown RBP25.31■■□□□ 1.64
HLA-C-204ENST00000415537 TRIM7Q9C029 511 aa25.31■■□□□ 1.64
HLA-C-204ENST00000415537 ISCUQ9H1K1 167 aa25.31■■□□□ 1.64
HLA-C-204ENST00000415537 IPO11Q9UI26 975 aaKnown RBP25.31■■□□□ 1.64
HLA-C-204ENST00000415537 GGT7Q9UJ14 662 aa25.31■■□□□ 1.64
HLA-C-204ENST00000415537 ITM2BQ9Y287 266 aa25.31■■□□□ 1.64
HLA-C-204ENST00000415537 GOLGA4Q13439 2230 aaKnown RBP25.31■■□□□ 1.64
HLA-C-204ENST00000415537 A0A1W2PQJ5 194 aa25.3■■□□□ 1.64
HLA-C-204ENST00000415537 FAM149AA5PLN7 773 aa25.3■■□□□ 1.64
HLA-C-204ENST00000415537 POM121BA6NF01 834 aa25.3■■□□□ 1.64
HLA-C-204ENST00000415537 CKMT2P17540 419 aa25.3■■□□□ 1.64
HLA-C-204ENST00000415537 PTMSP20962 102 aa25.3■■□□□ 1.64
HLA-C-204ENST00000415537 XPAP23025 273 aaPredicted RBP25.3■■□□□ 1.64
HLA-C-204ENST00000415537 DGKAP23743 735 aa25.3■■□□□ 1.64
HLA-C-204ENST00000415537 RABIFP47224 123 aa25.3■■□□□ 1.64
HLA-C-204ENST00000415537 ACADVLP49748 655 aa25.3■■□□□ 1.64
HLA-C-204ENST00000415537 GRM3Q14832 879 aa25.3■■□□□ 1.64
HLA-C-204ENST00000415537 CYTH1Q15438 398 aa25.3■■□□□ 1.64
HLA-C-204ENST00000415537 RFX8Q6ZV50 586 aa25.3■■□□□ 1.64
HLA-C-204ENST00000415537 TMPRSS12Q86WS5 348 aa25.3■■□□□ 1.64
HLA-C-204ENST00000415537 PSTKQ8IV42 348 aaKnown RBP25.3■■□□□ 1.64
HLA-C-204ENST00000415537 SLC22A18ASQ8N1D0 253 aa25.3■■□□□ 1.64
HLA-C-204ENST00000415537 CXorf40AQ8TE69 158 aa25.3■■□□□ 1.64
HLA-C-204ENST00000415537 IFT43Q96FT9 208 aa25.3■■□□□ 1.64
HLA-C-204ENST00000415537 EXOC2Q96KP1 924 aa25.3■■□□□ 1.64
HLA-C-204ENST00000415537 KCTD15Q96SI1 283 aaPredicted RBP25.3■■□□□ 1.64
HLA-C-204ENST00000415537 DNAJC28Q9NX36 388 aa25.3■■□□□ 1.64
HLA-C-204ENST00000415537 ARID1BQ8NFD5 2236 aaPredicted RBP25.3■■□□□ 1.64
HLA-C-204ENST00000415537 IGF2RP11717 2491 aa25.3■■□□□ 1.64
HLA-C-204ENST00000415537 J3KR12 359 aa25.29■■□□□ 1.64
HLA-C-204ENST00000415537 RAD51BO15315 384 aa25.29■■□□□ 1.64
HLA-C-204ENST00000415537 HNF1BP35680 557 aa25.29■■□□□ 1.64
HLA-C-204ENST00000415537 PAPOLAP51003 745 aaKnown RBP25.29■■□□□ 1.64
HLA-C-204ENST00000415537 ZNF135P52742 658 aaPredicted RBP25.29■■□□□ 1.64
HLA-C-204ENST00000415537 ACAP1Q15027 740 aa25.29■■□□□ 1.64
HLA-C-204ENST00000415537 LRRC73Q5JTD7 316 aa25.29■■□□□ 1.64
HLA-C-204ENST00000415537 PROSER1Q86XN7 944 aa25.29■■□□□ 1.64
HLA-C-204ENST00000415537 MARCH9Q86YJ5 346 aa25.29■■□□□ 1.64
HLA-C-204ENST00000415537 SLC25A45Q8N413 288 aa25.29■■□□□ 1.64
HLA-C-204ENST00000415537 CPLX3Q8WVH0 158 aa25.29■■□□□ 1.64
HLA-C-204ENST00000415537 ASB12Q8WXK4 309 aa25.29■■□□□ 1.64
HLA-C-204ENST00000415537 TSC1Q92574 1164 aa25.29■■□□□ 1.64
HLA-C-204ENST00000415537 SYN2Q92777 582 aaPredicted RBP25.29■■□□□ 1.64
HLA-C-204ENST00000415537 SLC39A8Q9C0K1 460 aa25.29■■□□□ 1.64
HLA-C-204ENST00000415537 DKK3Q9UBP4 350 aa25.29■■□□□ 1.64
HLA-C-204ENST00000415537 LHX3Q9UBR4 397 aa25.29■■□□□ 1.64
HLA-C-204ENST00000415537 AREL1O15033 823 aa25.28■■□□□ 1.64
HLA-C-204ENST00000415537 PRAMEF11O60813 436 aa25.28■■□□□ 1.64
HLA-C-204ENST00000415537 LRCH4O75427 683 aa25.28■■□□□ 1.64
HLA-C-204ENST00000415537 PIAS2O75928 621 aa25.28■■□□□ 1.64
HLA-C-204ENST00000415537 ERCC2P18074 760 aa25.28■■□□□ 1.64
HLA-C-204ENST00000415537 ZNF211Q13398 564 aaPredicted RBP25.28■■□□□ 1.64
HLA-C-204ENST00000415537 ILKQ13418 452 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms