RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 NPNTQ6UXI9 565 aa10.11□□□□□ -0.79
DDB1-202ENST00000414411 PHTF2Q8N3S3 785 aa10.11□□□□□ -0.79
DDB1-202ENST00000414411 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.11□□□□□ -0.79
DDB1-202ENST00000414411 NAT16Q8N8M0 369 aa10.11□□□□□ -0.79
DDB1-202ENST00000414411 ZNF557Q8N988 423 aaPredicted RBP10.11□□□□□ -0.79
DDB1-202ENST00000414411 ATP11CQ8NB49 1132 aa10.11□□□□□ -0.79
DDB1-202ENST00000414411 NETO2Q8NC67 525 aa10.11□□□□□ -0.79
DDB1-202ENST00000414411 TTC8Q8TAM2 541 aa10.11□□□□□ -0.79
DDB1-202ENST00000414411 MAGEB18Q96M61 343 aa10.11□□□□□ -0.79
DDB1-202ENST00000414411 OLFM3Q96PB7 478 aa10.11□□□□□ -0.79
DDB1-202ENST00000414411 WDR83Q9BRX9 315 aaKnown RBP10.11□□□□□ -0.79
DDB1-202ENST00000414411 MAGEH1Q9H213 219 aa10.11□□□□□ -0.79
DDB1-202ENST00000414411 FETUBQ9UGM5 382 aa10.11□□□□□ -0.79
DDB1-202ENST00000414411 INTS6Q9UL03 887 aaKnown RBP10.11□□□□□ -0.79
DDB1-202ENST00000414411 HEY1Q9Y5J3 304 aa10.11□□□□□ -0.79
DDB1-202ENST00000414411 RAD54BQ9Y620 910 aa10.11□□□□□ -0.79
DDB1-202ENST00000414411 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.11□□□□□ -0.79
DDB1-202ENST00000414411 A0A0A0MRY4 1105 aa10.11□□□□□ -0.79
DDB1-202ENST00000414411 TCRBV7S3A2A0A539 114 aa10.11□□□□□ -0.79
DDB1-202ENST00000414411 SHISA7A6NL88 538 aa10.11□□□□□ -0.79
DDB1-202ENST00000414411 RAMP2O60895 175 aa10.11□□□□□ -0.79
DDB1-202ENST00000414411 MZF1P28698 734 aaPredicted RBP10.11□□□□□ -0.79
DDB1-202ENST00000414411 PHBP35232 272 aa10.11□□□□□ -0.79
DDB1-202ENST00000414411 EIF2DP41214 584 aaKnown RBP10.11□□□□□ -0.79
DDB1-202ENST00000414411 SLC18A1P54219 525 aa10.11□□□□□ -0.79
DDB1-202ENST00000414411 OXCT1P55809 520 aa10.11□□□□□ -0.79
DDB1-202ENST00000414411 GALNT2Q10471 571 aa10.11□□□□□ -0.79
DDB1-202ENST00000414411 SF3A3Q12874 501 aaKnown RBP eCLIP10.11□□□□□ -0.796e-6■□□□□ 10.9
DDB1-202ENST00000414411 LMAN2Q12907 356 aa10.11□□□□□ -0.79
DDB1-202ENST00000414411 SERINC3Q13530 473 aa10.11□□□□□ -0.79
DDB1-202ENST00000414411 SLC12A1Q13621 1099 aa10.11□□□□□ -0.79
DDB1-202ENST00000414411 POLD3Q15054 466 aaPredicted RBP10.11□□□□□ -0.79
DDB1-202ENST00000414411 PARP15Q460N3 678 aa10.11□□□□□ -0.79
DDB1-202ENST00000414411 C1orf228Q6PIY5 440 aa10.11□□□□□ -0.79
DDB1-202ENST00000414411 TRPM8Q7Z2W7 1104 aa10.11□□□□□ -0.79
DDB1-202ENST00000414411 RNF135Q8IUD6 432 aa10.11□□□□□ -0.79
DDB1-202ENST00000414411 ANKMY2Q8IV38 441 aa10.11□□□□□ -0.79
DDB1-202ENST00000414411 CSGALNACT1Q8TDX6 532 aa10.11□□□□□ -0.79
DDB1-202ENST00000414411 PYROXD1Q8WU10 500 aa10.11□□□□□ -0.79
DDB1-202ENST00000414411 CELF6Q96J87 481 aaKnown RBP10.11□□□□□ -0.79
DDB1-202ENST00000414411 ACE2Q9BYF1 805 aaPredicted RBP10.11□□□□□ -0.79
DDB1-202ENST00000414411 TRABDQ9H4I3 376 aa10.11□□□□□ -0.79
DDB1-202ENST00000414411 CD320Q9NPF0 282 aa10.11□□□□□ -0.79
DDB1-202ENST00000414411 ABCB8Q9NUT2 735 aa10.11□□□□□ -0.79
DDB1-202ENST00000414411 PSMC3IPQ9P2W1 217 aaPredicted RBP10.11□□□□□ -0.79
DDB1-202ENST00000414411 DUSP12Q9UNI6 340 aa10.11□□□□□ -0.79
DDB1-202ENST00000414411 RPS6KL1Q9Y6S9 549 aa10.11□□□□□ -0.79
DDB1-202ENST00000414411 NYNRINQ9P2P1 1898 aaKnown RBP10.11□□□□□ -0.79
DDB1-202ENST00000414411 KIAA1549LQ6ZVL6 1849 aa10.11□□□□□ -0.79
DDB1-202ENST00000414411 NCAM2O15394 837 aa10.1□□□□□ -0.79
DDB1-202ENST00000414411 ZMPSTE24O75844 475 aa10.1□□□□□ -0.79
DDB1-202ENST00000414411 MAP3K6O95382 1288 aa10.1□□□□□ -0.79
DDB1-202ENST00000414411 ASMTLO95671 621 aa10.1□□□□□ -0.79
DDB1-202ENST00000414411 RHOCP08134 193 aa10.1□□□□□ -0.79
DDB1-202ENST00000414411 GSTA1P08263 222 aa10.1□□□□□ -0.79
DDB1-202ENST00000414411 GLULP15104 373 aa10.1□□□□□ -0.79
DDB1-202ENST00000414411 KRT15P19012 456 aa10.1□□□□□ -0.79
DDB1-202ENST00000414411 STIP1P31948 543 aaKnown RBP10.1□□□□□ -0.79
DDB1-202ENST00000414411 ACVRL1P37023 503 aa10.1□□□□□ -0.79
DDB1-202ENST00000414411 SOX9P48436 509 aa10.1□□□□□ -0.79
DDB1-202ENST00000414411 DGKGP49619 791 aa10.1□□□□□ -0.79
DDB1-202ENST00000414411 PAPOLAP51003 745 aaKnown RBP10.1□□□□□ -0.79
DDB1-202ENST00000414411 WDR4P57081 412 aaKnown RBP10.1□□□□□ -0.79
DDB1-202ENST00000414411 GEMIN4P57678 1058 aaKnown RBP10.1□□□□□ -0.79
DDB1-202ENST00000414411 BASP1P80723 227 aaKnown RBP10.1□□□□□ -0.79
DDB1-202ENST00000414411 IL9RQ01113 521 aa10.1□□□□□ -0.79
DDB1-202ENST00000414411 PFKPQ01813 784 aa10.1□□□□□ -0.79
DDB1-202ENST00000414411 XRCC4Q13426 336 aa10.1□□□□□ -0.79
DDB1-202ENST00000414411 PLEKHG6Q3KR16 790 aa10.1□□□□□ -0.79
DDB1-202ENST00000414411 RNF219Q5W0B1 726 aaPredicted RBP10.1□□□□□ -0.79
DDB1-202ENST00000414411 TMEM215Q68D42 235 aa10.1□□□□□ -0.79
DDB1-202ENST00000414411 NAIF1Q69YI7 327 aaPredicted RBP10.1□□□□□ -0.79
DDB1-202ENST00000414411 BZW1Q7L1Q6 419 aaKnown RBP10.1□□□□□ -0.79
DDB1-202ENST00000414411 ADIPOR2Q86V24 386 aa10.1□□□□□ -0.79
DDB1-202ENST00000414411 LRRC49Q8IUZ0 686 aa10.1□□□□□ -0.79
DDB1-202ENST00000414411 APCDD1Q8J025 514 aa10.1□□□□□ -0.79
DDB1-202ENST00000414411 PDIK1LQ8N165 341 aa10.1□□□□□ -0.79
DDB1-202ENST00000414411 PTCD2Q8WV60 388 aaKnown RBP10.1□□□□□ -0.79
DDB1-202ENST00000414411 HMCESQ96FZ2 354 aa10.1□□□□□ -0.79
DDB1-202ENST00000414411 TSGA13Q96PP4 275 aa10.1□□□□□ -0.79
DDB1-202ENST00000414411 DHRS4Q9BTZ2 278 aa10.1□□□□□ -0.79
DDB1-202ENST00000414411 ACSS3Q9H6R3 686 aa10.1□□□□□ -0.79
DDB1-202ENST00000414411 FBRSL1Q9HCM7 1045 aaKnown RBP10.1□□□□□ -0.79
DDB1-202ENST00000414411 HEBP1Q9NRV9 189 aa10.1□□□□□ -0.79
DDB1-202ENST00000414411 DEC1Q9P2X7 70 aa10.1□□□□□ -0.79
DDB1-202ENST00000414411 RABGEF1Q9UJ41 708 aa10.1□□□□□ -0.79
DDB1-202ENST00000414411 SLC12A4Q9UP95 1085 aa10.1□□□□□ -0.79
DDB1-202ENST00000414411 SMG5Q9UPR3 1016 aaKnown RBP10.1□□□□□ -0.79
DDB1-202ENST00000414411 SORCS3Q9UPU3 1222 aa10.1□□□□□ -0.79
DDB1-202ENST00000414411 SHROOM3Q8TF72 1996 aa10.1□□□□□ -0.79
DDB1-202ENST00000414411 ARHGAP42A6NI28 874 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 SPECC1L-ADORA2AF8WAN1 911 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 MAFKO60675 156 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 SPAG7O75391 227 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 RASSF9O75901 435 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 DNAJC8O75937 253 aaPredicted RBP10.09□□□□□ -0.79
DDB1-202ENST00000414411 SUN1O94901 812 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 PABPC1P11940 636 aaKnown RBP10.09□□□□□ -0.79
DDB1-202ENST00000414411 TSHRP16473 764 aa10.09□□□□□ -0.79
DDB1-202ENST00000414411 TAC1P20366 129 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms