RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 CRADDP78560 199 aa6.73□□□□□ -1.33
VPS41-204ENST00000413141 GPS2Q13227 327 aa6.73□□□□□ -1.33
VPS41-204ENST00000413141 GRM2Q14416 872 aa6.73□□□□□ -1.33
VPS41-204ENST00000413141 DMC1Q14565 340 aa6.73□□□□□ -1.33
VPS41-204ENST00000413141 KRT71Q3SY84 523 aa6.73□□□□□ -1.33
VPS41-204ENST00000413141 HSP90B2PQ58FF3 399 aa6.73□□□□□ -1.33
VPS41-204ENST00000413141 RALGPS1Q5JS13 557 aa6.73□□□□□ -1.33
VPS41-204ENST00000413141 STEAP4Q687X5 459 aa6.73□□□□□ -1.33
VPS41-204ENST00000413141 TMEM215Q68D42 235 aa6.73□□□□□ -1.33
VPS41-204ENST00000413141 MBLAC2Q68D91 279 aa6.73□□□□□ -1.33
VPS41-204ENST00000413141 DENND5AQ6IQ26 1287 aa6.73□□□□□ -1.33
VPS41-204ENST00000413141 CASC4Q6P4E1 433 aa6.73□□□□□ -1.33
VPS41-204ENST00000413141 C22orf39Q6P5X5 142 aa6.73□□□□□ -1.33
VPS41-204ENST00000413141 PARM1Q6UWI2 310 aa6.73□□□□□ -1.33
VPS41-204ENST00000413141 RANBP10Q6VN20 620 aa6.73□□□□□ -1.33
VPS41-204ENST00000413141 UNC5AQ6ZN44 842 aa6.73□□□□□ -1.33
VPS41-204ENST00000413141 MTSS1LQ765P7 747 aa6.73□□□□□ -1.33
VPS41-204ENST00000413141 ADIPOR2Q86V24 386 aa6.73□□□□□ -1.33
VPS41-204ENST00000413141 RNF135Q8IUD6 432 aa6.73□□□□□ -1.33
VPS41-204ENST00000413141 CCNJLQ8IV13 435 aa6.73□□□□□ -1.33
VPS41-204ENST00000413141 MFSD6LQ8IWD5 586 aa6.73□□□□□ -1.33
VPS41-204ENST00000413141 PALM2Q8IXS6 379 aa6.73□□□□□ -1.33
VPS41-204ENST00000413141 CPA6Q8N4T0 437 aa6.73□□□□□ -1.33
VPS41-204ENST00000413141 GOLGA6L1Q8N7Z2 621 aa6.73□□□□□ -1.33
VPS41-204ENST00000413141 NAT16Q8N8M0 369 aa6.73□□□□□ -1.33
VPS41-204ENST00000413141 EPS8L3Q8TE67 593 aaKnown RBP6.73□□□□□ -1.33
VPS41-204ENST00000413141 FBF1Q8TES7 1133 aa6.73□□□□□ -1.33
VPS41-204ENST00000413141 WFIKKN2Q8TEU8 576 aa6.73□□□□□ -1.33
VPS41-204ENST00000413141 FGF14Q92915 247 aa6.73□□□□□ -1.33
VPS41-204ENST00000413141 CFAP36Q96G28 342 aa6.73□□□□□ -1.33
VPS41-204ENST00000413141 FEM1CQ96JP0 617 aa6.73□□□□□ -1.33
VPS41-204ENST00000413141 NSMCE3Q96MG7 304 aa6.73□□□□□ -1.33
VPS41-204ENST00000413141 XPO6Q96QU8 1125 aaKnown RBP6.73□□□□□ -1.33
VPS41-204ENST00000413141 TRIB3Q96RU7 358 aa6.73□□□□□ -1.33
VPS41-204ENST00000413141 TRIM56Q9BRZ2 755 aaKnown RBP6.73□□□□□ -1.33
VPS41-204ENST00000413141 NAT9Q9BTE0 207 aa6.73□□□□□ -1.33
VPS41-204ENST00000413141 TMEM109Q9BVC6 243 aa6.73□□□□□ -1.33
VPS41-204ENST00000413141 TDRD1Q9BXT4 1180 aaKnown RBP6.73□□□□□ -1.33
VPS41-204ENST00000413141 PLA2G2FQ9BZM2 168 aa6.73□□□□□ -1.33
VPS41-204ENST00000413141 IL22Q9GZX6 179 aa6.73□□□□□ -1.33
VPS41-204ENST00000413141 ACSS3Q9H6R3 686 aa6.73□□□□□ -1.33
VPS41-204ENST00000413141 ECT2Q9H8V3 914 aa6.73□□□□□ -1.33
VPS41-204ENST00000413141 ARNT2Q9HBZ2 717 aa6.73□□□□□ -1.33
VPS41-204ENST00000413141 NOD2Q9HC29 1040 aa6.73□□□□□ -1.33
VPS41-204ENST00000413141 BFARQ9NZS9 450 aa6.73□□□□□ -1.33
VPS41-204ENST00000413141 EPS15L1Q9UBC2 864 aa6.73□□□□□ -1.33
VPS41-204ENST00000413141 SLC25A13Q9UJS0 675 aa6.73□□□□□ -1.33
VPS41-204ENST00000413141 HS3ST2Q9Y278 367 aa6.73□□□□□ -1.33
VPS41-204ENST00000413141 MAD1L1Q9Y6D9 718 aa6.73□□□□□ -1.33
VPS41-204ENST00000413141 MYO18AQ92614 2054 aaKnown RBP6.73□□□□□ -1.33
VPS41-204ENST00000413141 MIA3Q5JRA6 1907 aa6.72□□□□□ -1.33
VPS41-204ENST00000413141 LOC285095A0A1B0GVY8 99 aa6.72□□□□□ -1.33
VPS41-204ENST00000413141 EXOC1LA0A1B0GW35 172 aa6.72□□□□□ -1.33
VPS41-204ENST00000413141 GRXCR2A6NFK2 248 aa6.72□□□□□ -1.33
VPS41-204ENST00000413141 GOLGA6L10A6NI86 522 aa6.72□□□□□ -1.33
VPS41-204ENST00000413141 SMIM23A6NLE4 172 aa6.72□□□□□ -1.33
VPS41-204ENST00000413141 GOLGA8KD6RF30 607 aa6.72□□□□□ -1.33
VPS41-204ENST00000413141 H3BQ06 376 aaPredicted RBP6.72□□□□□ -1.33
VPS41-204ENST00000413141 ARNTLO00327 626 aa6.72□□□□□ -1.33
VPS41-204ENST00000413141 SMAD6O43541 496 aaKnown RBP6.72□□□□□ -1.33
VPS41-204ENST00000413141 RNF40O75150 1001 aa6.72□□□□□ -1.33
VPS41-204ENST00000413141 TULP3O75386 442 aa6.72□□□□□ -1.33
VPS41-204ENST00000413141 ZNF821O75541 412 aaPredicted RBP6.72□□□□□ -1.33
VPS41-204ENST00000413141 TCEA3O75764 348 aa6.72□□□□□ -1.33
VPS41-204ENST00000413141 IGSF6O95976 241 aa6.72□□□□□ -1.33
VPS41-204ENST00000413141 GSRP00390 522 aa6.72□□□□□ -1.33
VPS41-204ENST00000413141 C1QAP02745 245 aa6.72□□□□□ -1.33
VPS41-204ENST00000413141 FGF1P05230 155 aa6.72□□□□□ -1.33
VPS41-204ENST00000413141 CISD3P0C7P0 127 aa6.72□□□□□ -1.33
VPS41-204ENST00000413141 MYZAPP0CAP1 466 aa6.72□□□□□ -1.33
VPS41-204ENST00000413141 TPH1P17752 444 aa6.72□□□□□ -1.33
VPS41-204ENST00000413141 HLA-DPA1P20036 260 aa6.72□□□□□ -1.33
VPS41-204ENST00000413141 CES1P23141 567 aa6.72□□□□□ -1.33
VPS41-204ENST00000413141 PRKCHP24723 683 aa6.72□□□□□ -1.33
VPS41-204ENST00000413141 GCAP28676 217 aa6.72□□□□□ -1.33
VPS41-204ENST00000413141 OAS2P29728 719 aaKnown RBP6.72□□□□□ -1.33
VPS41-204ENST00000413141 MAPK8P45983 427 aa6.72□□□□□ -1.33
VPS41-204ENST00000413141 NPY2RP49146 381 aa6.72□□□□□ -1.33
VPS41-204ENST00000413141 SCNN1BP51168 640 aa6.72□□□□□ -1.33
VPS41-204ENST00000413141 AP1S1P61966 158 aa6.72□□□□□ -1.33
VPS41-204ENST00000413141 ECT2LQ008S8 904 aa6.72□□□□□ -1.33
VPS41-204ENST00000413141 KDSRQ06136 332 aa6.72□□□□□ -1.33
VPS41-204ENST00000413141 SULT2A1Q06520 285 aa6.72□□□□□ -1.33
VPS41-204ENST00000413141 CDK18Q07002 472 aa6.72□□□□□ -1.33
VPS41-204ENST00000413141 SLC20A2Q08357 652 aa6.72□□□□□ -1.33
VPS41-204ENST00000413141 NSUN2Q08J23 767 aaKnown RBP eCLIP6.72□□□□□ -1.33
VPS41-204ENST00000413141 TRAF2Q12933 501 aa6.72□□□□□ -1.33
VPS41-204ENST00000413141 HTR4Q13639 388 aa6.72□□□□□ -1.33
VPS41-204ENST00000413141 GALNT3Q14435 633 aa6.72□□□□□ -1.33
VPS41-204ENST00000413141 STAT4Q14765 748 aa6.72□□□□□ -1.33
VPS41-204ENST00000413141 POU6F1Q14863 301 aa6.72□□□□□ -1.33
VPS41-204ENST00000413141 CRYMQ14894 314 aa6.72□□□□□ -1.33
VPS41-204ENST00000413141 EFTUD2Q15029 972 aaKnown RBP eCLIP6.72□□□□□ -1.33
VPS41-204ENST00000413141 SLC1A5Q15758 541 aa6.72□□□□□ -1.33
VPS41-204ENST00000413141 LONRF1Q17RB8 773 aa6.72□□□□□ -1.33
VPS41-204ENST00000413141 GEN1Q17RS7 908 aa6.72□□□□□ -1.33
VPS41-204ENST00000413141 KLHL38Q2WGJ6 581 aa6.72□□□□□ -1.33
VPS41-204ENST00000413141 TTMPQ5BVD1 217 aa6.72□□□□□ -1.33
VPS41-204ENST00000413141 SIRPB2Q5JXA9 342 aa6.72□□□□□ -1.33
VPS41-204ENST00000413141 CERCAMQ5T4B2 595 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms