RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 BIRC7Q96CA5 298 aa7.82□□□□□ -1.16
CPSF4-202ENST00000412686 HDAC11Q96DB2 347 aa7.82□□□□□ -1.16
CPSF4-202ENST00000412686 KLHL32Q96NJ5 620 aa7.82□□□□□ -1.16
CPSF4-202ENST00000412686 OLFM3Q96PB7 478 aa7.82□□□□□ -1.16
CPSF4-202ENST00000412686 HS3ST6Q96QI5 342 aa7.82□□□□□ -1.16
CPSF4-202ENST00000412686 FAM118BQ9BPY3 351 aa7.82□□□□□ -1.16
CPSF4-202ENST00000412686 MAK16Q9BXY0 300 aaKnown RBP7.82□□□□□ -1.16
CPSF4-202ENST00000412686 TSGA10Q9BZW7 698 aa7.82□□□□□ -1.16
CPSF4-202ENST00000412686 C10orf88Q9H8K7 445 aa7.82□□□□□ -1.16
CPSF4-202ENST00000412686 EBF2Q9HAK2 575 aa7.82□□□□□ -1.16
CPSF4-202ENST00000412686 NT5MQ9NPB1 228 aa7.82□□□□□ -1.16
CPSF4-202ENST00000412686 RXFP3Q9NSD7 469 aa7.82□□□□□ -1.16
CPSF4-202ENST00000412686 GGT7Q9UJ14 662 aa7.82□□□□□ -1.16
CPSF4-202ENST00000412686 AMFRQ9UKV5 643 aa7.82□□□□□ -1.16
CPSF4-202ENST00000412686 SCML1Q9UN30 329 aa7.82□□□□□ -1.16
CPSF4-202ENST00000412686 ITM2BQ9Y287 266 aa7.82□□□□□ -1.16
CPSF4-202ENST00000412686 NCKAP1Q9Y2A7 1128 aa7.82□□□□□ -1.16
CPSF4-202ENST00000412686 PPP2R2CQ9Y2T4 447 aa7.82□□□□□ -1.16
CPSF4-202ENST00000412686 DOCK9Q9BZ29 2069 aa7.82□□□□□ -1.16
CPSF4-202ENST00000412686 ADAMTS9Q9P2N4 1935 aa7.82□□□□□ -1.16
CPSF4-202ENST00000412686 RALGAPA1Q6GYQ0 2036 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 SDK1Q7Z5N4 2213 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 BCLAF3A2AJT9 711 aaKnown RBP7.81□□□□□ -1.16
CPSF4-202ENST00000412686 CCDC66A2RUB6 948 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 METTL12A8MUP2 240 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 MEI4A8MW99 385 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 ZNF487B1APH4 448 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 KCNK1O00180 336 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 WNT9AO14904 365 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 SPINT1O43278 529 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 PLRG1O43660 514 aaKnown RBP7.81□□□□□ -1.16
CPSF4-202ENST00000412686 KRT86O43790 486 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 POP4O95707 220 aaKnown RBP7.81□□□□□ -1.16
CPSF4-202ENST00000412686 HLA-DQB2P05538 268 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 IGHV4-34P06331 123 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 RETP07949 1114 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 CR2P20023 1033 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 ITGB7P26010 798 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 MAT2AP31153 395 aaKnown RBP7.81□□□□□ -1.16
CPSF4-202ENST00000412686 MMP13P45452 471 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 SCNN1BP51168 640 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 RWDD2BP57060 319 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 DSC2Q02487 901 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 PPIDQ08752 370 aaKnown RBP7.81□□□□□ -1.16
CPSF4-202ENST00000412686 ZBTB17Q13105 803 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 ZNF235Q14590 738 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 RFTN1Q14699 578 aaPredicted RBP7.81□□□□□ -1.16
CPSF4-202ENST00000412686 SF3A2Q15428 464 aaKnown RBP7.81□□□□□ -1.16
CPSF4-202ENST00000412686 PPP2R5EQ16537 467 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 IFI16Q16666 785 aaKnown RBP7.81□□□□□ -1.16
CPSF4-202ENST00000412686 TFDP3Q5H9I0 405 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 PLA2G2CQ5R387 149 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 MARC1Q5VT66 337 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 KIAA0895LQ68EN5 471 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 GDPD4Q6W3E5 623 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 ERN2Q76MJ5 926 aaKnown RBP7.81□□□□□ -1.16
CPSF4-202ENST00000412686 SRLQ86TD4 932 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 C11orf74Q86VG3 221 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 ZC3H18Q86VM9 953 aaKnown RBP7.81□□□□□ -1.16
CPSF4-202ENST00000412686 VSIG1Q86XK7 387 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 CCDC13Q8IYE1 715 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 RGL4Q8IZJ4 473 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 SYCE1Q8N0S2 351 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 TXLNBQ8N3L3 684 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 ZCCHC9Q8N567 271 aaKnown RBP7.81□□□□□ -1.16
CPSF4-202ENST00000412686 RNF10Q8N5U6 811 aaKnown RBP7.81□□□□□ -1.16
CPSF4-202ENST00000412686 TEX26Q8N6G2 289 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 CCNYQ8ND76 341 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 MAML1Q92585 1016 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 KLK6Q92876 244 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 RBM41Q96IZ5 413 aaKnown RBP7.81□□□□□ -1.16
CPSF4-202ENST00000412686 LOXL4Q96JB6 756 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 CALR3Q96L12 384 aaKnown RBP7.81□□□□□ -1.16
CPSF4-202ENST00000412686 PSKH2Q96QS6 385 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 MYOCQ99972 504 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 MGME1Q9BQP7 344 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 ORAI3Q9BRQ5 295 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 OSBPL8Q9BZF1 889 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 MIR1-1HGQ9H1L0 117 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 SGK2Q9HBY8 427 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 SEMA4GQ9NTN9 838 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 SEPT3Q9UH03 358 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 EIF2B4Q9UI10 523 aaKnown RBP7.81□□□□□ -1.16
CPSF4-202ENST00000412686 PILRBQ9UKJ0 227 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 FZD4Q9ULV1 537 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 PYCARDQ9ULZ3 195 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 LHX6Q9UPM6 363 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.81□□□□□ -1.16
CPSF4-202ENST00000412686 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.81□□□□□ -1.16
CPSF4-202ENST00000412686 TTLL3Q9Y4R7 772 aa7.81□□□□□ -1.16
CPSF4-202ENST00000412686 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.81□□□□□ -1.16
CPSF4-202ENST00000412686 TBC1D3DA0A087WVF3 549 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 TBC1D3IA0A087WXS9 549 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 TBC1D3EA0A087X179 549 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 TBC1D3KA0A087X1G2 549 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 TCRBV7S2A1N4TA0A589 114 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 TBC1D3FA6NER0 549 aaPredicted RBP7.8□□□□□ -1.16
CPSF4-202ENST00000412686 C16orf96A6NNT2 1141 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 USP27XA6NNY8 438 aa7.8□□□□□ -1.16
CPSF4-202ENST00000412686 C10orf142B7Z368 130 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms