RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 SEPT4O43236 478 aa2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 HNRNPRO43390 633 aaKnown RBP2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 SPRY3O43610 288 aa2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 TSPAN3O60637 253 aa2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 KRT36O76013 467 aa2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 GLUD1P00367 558 aa2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 CYP21A2P08686 494 aa2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 FCGR1AP12314 374 aa2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 ALADP13716 330 aa2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 MATN1P21941 496 aa2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 IGHMBP2P38935 993 aaKnown RBP2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 GLUD2P49448 558 aa2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 RBM5P52756 815 aaKnown RBP eCLIP2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 RPL15P61313 204 aaKnown RBP2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 CBX1P83916 185 aa2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 TLE3Q04726 772 aa2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 KIF5AQ12840 1032 aa2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 CTXN3Q4LDR2 81 aa2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 DNTTIP2Q5QJE6 756 aaKnown RBP2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 WBP2NLQ6ICG8 309 aa2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 ADAM5Q6NVV9 412 aa2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 DHRS13Q6UX07 377 aa2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 H1FNTQ75WM6 255 aaPredicted RBP2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 SYT13Q7L8C5 426 aa2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 TSPYL6Q8N831 410 aa2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 FSIP1Q8NA03 581 aa2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 OR52L2PQ8NGH6 319 aa2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 GLMPQ8WWB7 406 aa2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 AKAP1Q92667 903 aaKnown RBP eCLIP2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 HTRA1Q92743 480 aa2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 TAF15Q92804 592 aaKnown RBP eCLIP2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 ZNF622Q969S3 477 aaKnown RBP eCLIP2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 SKA1Q96BD8 255 aa2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 KTI12Q96EK9 354 aaPredicted RBP2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 URB1-AS1Q96HZ7 61 aa2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 PIGSQ96S52 555 aa2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 NPAS1Q99742 590 aa2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 RNF26Q9BY78 433 aaPredicted RBP2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 TRIM2Q9C040 744 aa2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 ZHX3Q9H4I2 956 aa2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 UBN1Q9NPG3 1134 aa2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 CGNQ9P2M7 1197 aaKnown RBP2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 FZD10Q9ULW2 581 aa2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 DNAJC16Q9Y2G8 782 aa2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 RRP7AQ9Y3A4 280 aaKnown RBP2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 KIF3AQ9Y496 699 aa2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 GCC2Q8IWJ2 1684 aa2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 CGNL1Q0VF96 1302 aa2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 EMSYQ7Z589 1322 aa2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 POLA1P09884 1462 aaPredicted RBP2.65□□□□□ -1.99
HMGB3P2-201ENST00000411913 TBC1D3DA0A087WVF3 549 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 TBC1D3IA0A087WXS9 549 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 TBC1D3EA0A087X179 549 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 TBC1D3KA0A087X1G2 549 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 CLEC18AA5D8T8 446 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 TBC1D3BA6NDS4 549 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 TBC1D3FA6NER0 549 aaPredicted RBP2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 C3orf70A6NLC5 250 aaPredicted RBP2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 A6NLC8 198 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 TBC1D3LB9A6J9 549 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 M0QYT0 321 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 RGS14O43566 566 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 BUB3O43684 328 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 HEXIM1O94992 359 aaKnown RBP2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 ENO1P06733 434 aaKnown RBP2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 TBC1D3HP0C7X1 549 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 GM2AP17900 193 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 DUSP1P28562 367 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 ELF1P32519 619 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 GRK5P34947 590 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 PCP4P48539 62 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 TUBP50607 506 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 FOXL2P58012 376 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 FAM3BP58499 235 aaPredicted RBP2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 MPP1Q00013 466 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 GPS2Q13227 327 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 SIM2Q14190 667 aaPredicted RBP2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 GPR18Q14330 331 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 RBM39Q14498 530 aaKnown RBP2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 ANXA2RQ3ZCQ2 193 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 Q5PR19 223 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 ANKRD40Q6AI12 368 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 TBC1D3GQ6DHY5 549 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 TBC1D3CQ6IPX1 549 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 C16orf89Q6UX73 402 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 LRIG3Q6UXM1 1119 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 RHPN2Q8IUC4 686 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 TBC1D3Q8IZP1 549 aaPredicted RBP2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 PTGR2Q8N8N7 351 aaPredicted RBP2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 PCYOX1LQ8NBM8 494 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 CLEC18CQ8NCF0 446 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 PIBF1Q8WXW3 757 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 HVCN1Q96D96 273 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 TIGD1Q96MW7 591 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 DUX5Q96PT3 197 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 EPYCQ99645 322 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 REEP2Q9BRK0 252 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 SLC26A6Q9BXS9 759 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 GPR63Q9BZJ6 419 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms