RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 ZNF423Q2M1K9 1284 aa16.06■□□□□ 0.16
HOXD3-202ENST00000410016 CXCL17Q6UXB2 119 aa16.06■□□□□ 0.16
HOXD3-202ENST00000410016 TXNDC5Q8NBS9 432 aaKnown RBP16.06■□□□□ 0.16
HOXD3-202ENST00000410016 MAELQ96JY0 434 aaKnown RBP16.06■□□□□ 0.16
HOXD3-202ENST00000410016 CDRT15Q96T59 188 aa16.06■□□□□ 0.16
HOXD3-202ENST00000410016 MRPL46Q9H2W6 279 aaKnown RBP16.06■□□□□ 0.16
HOXD3-202ENST00000410016 ZBTB26Q9HCK0 441 aa16.06■□□□□ 0.16
HOXD3-202ENST00000410016 CDYLQ9Y232 598 aa16.06■□□□□ 0.16
HOXD3-202ENST00000410016 SCN4AP35499 1836 aa16.06■□□□□ 0.16
HOXD3-202ENST00000410016 KCNU1A8MYU2 1149 aa16.05■□□□□ 0.16
HOXD3-202ENST00000410016 PEX1O43933 1283 aa16.05■□□□□ 0.16
HOXD3-202ENST00000410016 ITGB1P05556 798 aa16.05■□□□□ 0.16
HOXD3-202ENST00000410016 PIM1P11309 404 aaPredicted RBP16.05■□□□□ 0.16
HOXD3-202ENST00000410016 UQCRBP14927 111 aa16.05■□□□□ 0.16
HOXD3-202ENST00000410016 VCLP18206 1134 aa16.05■□□□□ 0.16
HOXD3-202ENST00000410016 SLC5A3P53794 718 aa16.05■□□□□ 0.16
HOXD3-202ENST00000410016 GNASQ5JWF2 1037 aa16.05■□□□□ 0.16
HOXD3-202ENST00000410016 NAIF1Q69YI7 327 aaPredicted RBP16.05■□□□□ 0.16
HOXD3-202ENST00000410016 ZNF470Q6ECI4 717 aa16.05■□□□□ 0.16
HOXD3-202ENST00000410016 KIAA0930Q6ICG6 404 aaPredicted RBP16.05■□□□□ 0.16
HOXD3-202ENST00000410016 C16orf89Q6UX73 402 aa16.05■□□□□ 0.16
HOXD3-202ENST00000410016 KDELC2Q7Z4H8 507 aa16.05■□□□□ 0.16
HOXD3-202ENST00000410016 C14orf80Q86SX3 495 aa16.05■□□□□ 0.16
HOXD3-202ENST00000410016 SERINC5Q86VE9 423 aa16.05■□□□□ 0.16
HOXD3-202ENST00000410016 HEXDCQ8WVB3 486 aa16.05■□□□□ 0.16
HOXD3-202ENST00000410016 CATSPER2Q96P56 530 aa16.05■□□□□ 0.16
HOXD3-202ENST00000410016 TSC22D3Q99576 134 aa16.05■□□□□ 0.16
HOXD3-202ENST00000410016 MRPL57Q9BQC6 102 aaKnown RBP16.05■□□□□ 0.16
HOXD3-202ENST00000410016 VCX3BQ9H321 246 aa16.05■□□□□ 0.16
HOXD3-202ENST00000410016 FBXO5Q9UKT4 447 aa16.05■□□□□ 0.16
HOXD3-202ENST00000410016 TMEM233B4DJY2 109 aa16.05■□□□□ 0.16
HOXD3-202ENST00000410016 GPR182O15218 404 aa16.05■□□□□ 0.16
HOXD3-202ENST00000410016 NPHS1O60500 1241 aa16.05■□□□□ 0.16
HOXD3-202ENST00000410016 DUSP11O75319 330 aaKnown RBP16.05■□□□□ 0.16
HOXD3-202ENST00000410016 PEX11BO96011 259 aa16.05■□□□□ 0.16
HOXD3-202ENST00000410016 DPP6P42658 865 aa16.05■□□□□ 0.16
HOXD3-202ENST00000410016 CD151P48509 253 aa16.05■□□□□ 0.16
HOXD3-202ENST00000410016 PAPOLAP51003 745 aaKnown RBP16.05■□□□□ 0.16
HOXD3-202ENST00000410016 THOP1P52888 689 aa16.05■□□□□ 0.16
HOXD3-202ENST00000410016 TRIP10Q15642 601 aa16.05■□□□□ 0.16
HOXD3-202ENST00000410016 BTBD8Q5XKL5 378 aa16.05■□□□□ 0.16
HOXD3-202ENST00000410016 ZNF280DQ6N043 979 aa16.05■□□□□ 0.16
HOXD3-202ENST00000410016 SPNS2Q8IVW8 549 aa16.05■□□□□ 0.16
HOXD3-202ENST00000410016 C2orf69Q8N8R5 385 aa16.05■□□□□ 0.16
HOXD3-202ENST00000410016 TRPV1Q8NER1 839 aa16.05■□□□□ 0.16
HOXD3-202ENST00000410016 RSPH1Q8WYR4 309 aa16.05■□□□□ 0.16
HOXD3-202ENST00000410016 RCN3Q96D15 328 aa16.05■□□□□ 0.16
HOXD3-202ENST00000410016 TRAPPC9Q96Q05 1148 aa16.05■□□□□ 0.16
HOXD3-202ENST00000410016 MTG1Q9BT17 334 aaPredicted RBP16.05■□□□□ 0.16
HOXD3-202ENST00000410016 NOL6Q9H6R4 1146 aaKnown RBP16.05■□□□□ 0.16
HOXD3-202ENST00000410016 IGSF5Q9NSI5 407 aa16.05■□□□□ 0.16
HOXD3-202ENST00000410016 MPP6Q9NZW5 540 aa16.05■□□□□ 0.16
HOXD3-202ENST00000410016 NUDT5Q9UKK9 219 aa16.05■□□□□ 0.16
HOXD3-202ENST00000410016 DNAJB13P59910 316 aa16.04■□□□□ 0.16
HOXD3-202ENST00000410016 HERC3Q15034 1050 aa16.04■□□□□ 0.16
HOXD3-202ENST00000410016 PDCD2Q16342 344 aaPredicted RBP16.04■□□□□ 0.16
HOXD3-202ENST00000410016 OGFRL1Q5TC84 451 aaPredicted RBP16.04■□□□□ 0.16
HOXD3-202ENST00000410016 OVOS1Q6IE37 1185 aa16.04■□□□□ 0.16
HOXD3-202ENST00000410016 NEPROQ6NW34 567 aa16.04■□□□□ 0.16
HOXD3-202ENST00000410016 CNSTQ6PJW8 725 aa16.04■□□□□ 0.16
HOXD3-202ENST00000410016 SETD3Q86TU7 594 aaPredicted RBP16.04■□□□□ 0.16
HOXD3-202ENST00000410016 CCNYL1Q8N7R7 359 aa16.04■□□□□ 0.16
HOXD3-202ENST00000410016 RTL3Q8N8U3 475 aaKnown RBP16.04■□□□□ 0.16
HOXD3-202ENST00000410016 ELMO2Q96JJ3 720 aa16.04■□□□□ 0.16
HOXD3-202ENST00000410016 SERPINI1Q99574 410 aa16.04■□□□□ 0.16
HOXD3-202ENST00000410016 FSD1LQ9BXM9 530 aa16.04■□□□□ 0.16
HOXD3-202ENST00000410016 NMUR1Q9HB89 426 aa16.04■□□□□ 0.16
HOXD3-202ENST00000410016 ARNT2Q9HBZ2 717 aa16.04■□□□□ 0.16
HOXD3-202ENST00000410016 DSEQ9UL01 958 aa16.04■□□□□ 0.16
HOXD3-202ENST00000410016 PADI3Q9ULW8 664 aa16.04■□□□□ 0.16
HOXD3-202ENST00000410016 PSMD13Q9UNM6 376 aa16.04■□□□□ 0.16
HOXD3-202ENST00000410016 HS3ST4Q9Y661 456 aa16.04■□□□□ 0.16
HOXD3-202ENST00000410016 COPG1Q9Y678 874 aaKnown RBP16.04■□□□□ 0.16
HOXD3-202ENST00000410016 A0A0U1RQF3 1178 aa16.04■□□□□ 0.16
HOXD3-202ENST00000410016 TCAF2A6NFQ2 919 aa16.04■□□□□ 0.16
HOXD3-202ENST00000410016 E9PAM4 449 aa16.04■□□□□ 0.16
HOXD3-202ENST00000410016 F8W810 466 aa16.04■□□□□ 0.16
HOXD3-202ENST00000410016 AHCYL1O43865 530 aa16.04■□□□□ 0.16
HOXD3-202ENST00000410016 TADA2AO75478 443 aa16.04■□□□□ 0.16
HOXD3-202ENST00000410016 CELF2O95319 508 aaKnown RBP16.04■□□□□ 0.16
HOXD3-202ENST00000410016 AKR1A1P14550 325 aa16.04■□□□□ 0.16
HOXD3-202ENST00000410016 XRCC1P18887 633 aaPredicted RBP16.04■□□□□ 0.16
HOXD3-202ENST00000410016 RGS2P41220 211 aa16.04■□□□□ 0.16
HOXD3-202ENST00000410016 MLLT6P55198 1093 aaPredicted RBP16.04■□□□□ 0.16
HOXD3-202ENST00000410016 IRX1P78414 480 aaPredicted RBP16.04■□□□□ 0.16
HOXD3-202ENST00000410016 MS4A2Q01362 244 aa16.04■□□□□ 0.16
HOXD3-202ENST00000410016 POU4F1Q01851 419 aa16.04■□□□□ 0.16
HOXD3-202ENST00000410016 CEACAM7Q14002 265 aa16.04■□□□□ 0.16
HOXD3-202ENST00000410016 ZNF789Q5FWF6 425 aa16.04■□□□□ 0.16
HOXD3-202ENST00000410016 THEMIS2Q5TEJ8 643 aa16.04■□□□□ 0.16
HOXD3-202ENST00000410016 TIGD7Q6NT04 549 aaPredicted RBP16.04■□□□□ 0.16
HOXD3-202ENST00000410016 KDELC1Q6UW63 502 aa16.04■□□□□ 0.16
HOXD3-202ENST00000410016 TRIM67Q6ZTA4 783 aa16.04■□□□□ 0.16
HOXD3-202ENST00000410016 PIWIL4Q7Z3Z4 852 aaKnown RBP16.04■□□□□ 0.16
HOXD3-202ENST00000410016 PGAM4Q8N0Y7 254 aa16.04■□□□□ 0.16
HOXD3-202ENST00000410016 PPP1R2P1Q96PQ5 205 aa16.04■□□□□ 0.16
HOXD3-202ENST00000410016 SUDS3Q9H7L9 328 aaPredicted RBP16.04■□□□□ 0.16
HOXD3-202ENST00000410016 OSER1Q9NX31 292 aa16.04■□□□□ 0.16
HOXD3-202ENST00000410016 CLIC5Q9NZA1 410 aa16.04■□□□□ 0.16
HOXD3-202ENST00000410016 NCKIPSDQ9NZQ3 722 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms