RNA–Protein interactions for RNA: ENST00000409985.5

PMS1-205, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 1,882 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-205ENST00000409985 DHDDSQ86SQ9 333 aa24.05■■□□□ 1.44
PMS1-205ENST00000409985 LRRTM3Q86VH5 581 aa24.05■■□□□ 1.44
PMS1-205ENST00000409985 FSTL5Q8N475 847 aaPredicted RBP24.05■■□□□ 1.44
PMS1-205ENST00000409985 OR10T2Q8NGX3 314 aa24.05■■□□□ 1.44
PMS1-205ENST00000409985 SPATA22Q8NHS9 363 aa24.05■■□□□ 1.44
PMS1-205ENST00000409985 MAPK15Q8TD08 544 aa24.05■■□□□ 1.44
PMS1-205ENST00000409985 FCRL2Q96LA5 508 aaPredicted RBP24.05■■□□□ 1.44
PMS1-205ENST00000409985 GPR78Q96P69 363 aa24.05■■□□□ 1.44
PMS1-205ENST00000409985 ECSITQ9BQ95 431 aa24.05■■□□□ 1.44
PMS1-205ENST00000409985 OXCT2Q9BYC2 517 aaPredicted RBP24.05■■□□□ 1.44
PMS1-205ENST00000409985 PPP1R12CQ9BZL4 782 aa24.05■■□□□ 1.44
PMS1-205ENST00000409985 SIK2Q9H0K1 926 aa24.05■■□□□ 1.44
PMS1-205ENST00000409985 ZNF385DQ9H6B1 395 aa24.05■■□□□ 1.44
PMS1-205ENST00000409985 SQORQ9Y6N5 450 aa24.05■■□□□ 1.44
PMS1-205ENST00000409985 ALPK3Q96L96 1907 aa24.05■■□□□ 1.44
PMS1-205ENST00000409985 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.04■■□□□ 1.44
PMS1-205ENST00000409985 BUD23O43709 281 aaKnown RBP24.04■■□□□ 1.44
PMS1-205ENST00000409985 PDHA1P08559 390 aa24.04■■□□□ 1.44
PMS1-205ENST00000409985 SLC2A3P11169 496 aa24.04■■□□□ 1.44
PMS1-205ENST00000409985 SMAD1Q15797 465 aaKnown RBP24.04■■□□□ 1.44
PMS1-205ENST00000409985 TMEM154Q6P9G4 183 aa24.04■■□□□ 1.44
PMS1-205ENST00000409985 TRAF7Q6Q0C0 670 aa24.04■■□□□ 1.44
PMS1-205ENST00000409985 C16orf89Q6UX73 402 aa24.04■■□□□ 1.44
PMS1-205ENST00000409985 TMC7Q7Z402 723 aa24.04■■□□□ 1.44
PMS1-205ENST00000409985 DEFB107AQ8IZN7 70 aa24.04■■□□□ 1.44
PMS1-205ENST00000409985 CALML6Q8TD86 181 aa24.04■■□□□ 1.44
PMS1-205ENST00000409985 SERPINB11Q96P15 392 aa24.04■■□□□ 1.44
PMS1-205ENST00000409985 SERPINI1Q99574 410 aa24.04■■□□□ 1.44
PMS1-205ENST00000409985 MRPL57Q9BQC6 102 aaKnown RBP24.04■■□□□ 1.44
PMS1-205ENST00000409985 FICDQ9BVA6 458 aa24.04■■□□□ 1.44
PMS1-205ENST00000409985 CPSF2Q9P2I0 782 aaKnown RBP24.04■■□□□ 1.44
PMS1-205ENST00000409985 PPM1HQ9ULR3 514 aa24.04■■□□□ 1.44
PMS1-205ENST00000409985 PCDHB8Q9UN66 801 aa24.04■■□□□ 1.44
PMS1-205ENST00000409985 POMPQ9Y244 141 aa24.04■■□□□ 1.44
PMS1-205ENST00000409985 SSX2IPQ9Y2D8 614 aa24.04■■□□□ 1.44
PMS1-205ENST00000409985 E2F8A0AVK6 867 aa24.04■■□□□ 1.44
PMS1-205ENST00000409985 DPPA5A6NC42 116 aa24.04■■□□□ 1.44
PMS1-205ENST00000409985 CDC25CP30307 473 aa24.04■■□□□ 1.44
PMS1-205ENST00000409985 BRCC3P46736 316 aa24.04■■□□□ 1.44
PMS1-205ENST00000409985 SLC5A3P53794 718 aa24.04■■□□□ 1.44
PMS1-205ENST00000409985 MLLT6P55198 1093 aaPredicted RBP24.04■■□□□ 1.44
PMS1-205ENST00000409985 TNK2Q07912 1038 aa24.04■■□□□ 1.44
PMS1-205ENST00000409985 TBL3Q12788 808 aaKnown RBP24.04■■□□□ 1.44
PMS1-205ENST00000409985 CUL3Q13618 768 aa24.04■■□□□ 1.44
PMS1-205ENST00000409985 CCNIQ14094 377 aa24.04■■□□□ 1.44
PMS1-205ENST00000409985 ARL13AQ5H913 290 aaPredicted RBP24.04■■□□□ 1.44
PMS1-205ENST00000409985 MSANTD2Q6P1R3 559 aa24.04■■□□□ 1.44
PMS1-205ENST00000409985 ARHGAP36Q6ZRI8 547 aa24.04■■□□□ 1.44
PMS1-205ENST00000409985 SPATA2LQ8IUW3 424 aaPredicted RBP24.04■■□□□ 1.44
PMS1-205ENST00000409985 KBTBD2Q8IY47 623 aa24.04■■□□□ 1.44
PMS1-205ENST00000409985 IPMKQ8NFU5 416 aa24.04■■□□□ 1.44
PMS1-205ENST00000409985 PPP2R3CQ969Q6 453 aa24.04■■□□□ 1.44
PMS1-205ENST00000409985 CCDC126Q96EE4 140 aa24.04■■□□□ 1.44
PMS1-205ENST00000409985 MRPL46Q9H2W6 279 aaKnown RBP24.04■■□□□ 1.44
PMS1-205ENST00000409985 TDRD15B5MCY1 1934 aaKnown RBP24.03■■□□□ 1.44
PMS1-205ENST00000409985 LAMA2P24043 3122 aaKnown RBP24.03■■□□□ 1.44
PMS1-205ENST00000409985 FAM95CA0A1B0GW59 222 aa24.03■■□□□ 1.44
PMS1-205ENST00000409985 TK2O00142 265 aa24.03■■□□□ 1.44
PMS1-205ENST00000409985 GRID2O43424 1007 aa24.03■■□□□ 1.44
PMS1-205ENST00000409985 VAPBO95292 243 aa24.03■■□□□ 1.44
PMS1-205ENST00000409985 PAPSS2O95340 614 aaPredicted RBP24.03■■□□□ 1.44
PMS1-205ENST00000409985 PIGNO95427 931 aa24.03■■□□□ 1.44
PMS1-205ENST00000409985 CTSHP09668 335 aa24.03■■□□□ 1.44
PMS1-205ENST00000409985 LINGO3P0C6S8 592 aa24.03■■□□□ 1.44
PMS1-205ENST00000409985 ARNTP27540 789 aa24.03■■□□□ 1.44
PMS1-205ENST00000409985 CD151P48509 253 aa24.03■■□□□ 1.44
PMS1-205ENST00000409985 NDST2P52849 883 aa24.03■■□□□ 1.44
PMS1-205ENST00000409985 PIWIL4Q7Z3Z4 852 aaKnown RBP24.03■■□□□ 1.44
PMS1-205ENST00000409985 SCAMP5Q8TAC9 235 aa24.03■■□□□ 1.44
PMS1-205ENST00000409985 USP33Q8TEY7 942 aa24.03■■□□□ 1.44
PMS1-205ENST00000409985 SCYL1Q96KG9 808 aa24.03■■□□□ 1.44
PMS1-205ENST00000409985 OR52B2Q96RD2 323 aa24.03■■□□□ 1.44
PMS1-205ENST00000409985 TTC1Q99614 292 aa24.03■■□□□ 1.44
PMS1-205ENST00000409985 SLC25A51Q9H1U9 297 aa24.03■■□□□ 1.44
PMS1-205ENST00000409985 VPS45Q9NRW7 570 aa24.03■■□□□ 1.44
PMS1-205ENST00000409985 RBM22Q9NW64 420 aaKnown RBP eCLIP24.03■■□□□ 1.44
PMS1-205ENST00000409985 BCAP29Q9UHQ4 241 aa24.03■■□□□ 1.44
PMS1-205ENST00000409985 E9PBE3 544 aa24.02■■□□□ 1.44
PMS1-205ENST00000409985 PEX1O43933 1283 aa24.02■■□□□ 1.44
PMS1-205ENST00000409985 KLHL41O60662 606 aa24.02■■□□□ 1.44
PMS1-205ENST00000409985 MT-CYBP00156 380 aaPredicted RBP24.02■■□□□ 1.44
PMS1-205ENST00000409985 PIK3R1P27986 724 aa24.02■■□□□ 1.44
PMS1-205ENST00000409985 ABCG1P45844 678 aa24.02■■□□□ 1.44
PMS1-205ENST00000409985 SATB1Q01826 763 aa24.02■■□□□ 1.44
PMS1-205ENST00000409985 ESRP1Q6NXG1 681 aaKnown RBP24.02■■□□□ 1.44
PMS1-205ENST00000409985 SCD5Q86SK9 330 aa24.02■■□□□ 1.44
PMS1-205ENST00000409985 UMODL1-AS1Q8N2C9 162 aa24.02■■□□□ 1.44
PMS1-205ENST00000409985 KCTD4Q8WVF5 259 aa24.02■■□□□ 1.44
PMS1-205ENST00000409985 LENG8Q96PV6 779 aaPredicted RBP24.02■■□□□ 1.44
PMS1-205ENST00000409985 ATP13A1Q9HD20 1204 aa24.02■■□□□ 1.44
PMS1-205ENST00000409985 SPATS2LQ9NUQ6 558 aaKnown RBP24.02■■□□□ 1.44
PMS1-205ENST00000409985 E9PAM4 449 aa24.02■■□□□ 1.44
PMS1-205ENST00000409985 CASQ2O14958 399 aaPredicted RBP24.02■■□□□ 1.44
PMS1-205ENST00000409985 PHGDHO43175 533 aaKnown RBP24.02■■□□□ 1.44
PMS1-205ENST00000409985 DLX3O60479 287 aa24.02■■□□□ 1.44
PMS1-205ENST00000409985 POMCP01189 267 aa24.02■■□□□ 1.44
PMS1-205ENST00000409985 HLA-DQB2P05538 268 aa24.02■■□□□ 1.44
PMS1-205ENST00000409985 MPSTP25325 297 aa24.02■■□□□ 1.44
PMS1-205ENST00000409985 PPARGP37231 505 aaPredicted RBP24.02■■□□□ 1.44
PMS1-205ENST00000409985 THPOP40225 353 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms