RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 NRXN2Q9P2S2 1712 aa11.52□□□□□ -0.57
SNX13-202ENST00000409604 H0Y3Z8 333 aa11.52□□□□□ -0.57
SNX13-202ENST00000409604 UGT1A9O60656 530 aa11.52□□□□□ -0.57
SNX13-202ENST00000409604 UGT1A6P19224 532 aa11.52□□□□□ -0.57
SNX13-202ENST00000409604 UGT1A1P22309 533 aa11.52□□□□□ -0.57
SNX13-202ENST00000409604 UGT1A4P22310 534 aa11.52□□□□□ -0.57
SNX13-202ENST00000409604 RFC2P35250 354 aa11.52□□□□□ -0.57
SNX13-202ENST00000409604 UGT1A3P35503 534 aa11.52□□□□□ -0.57
SNX13-202ENST00000409604 UGT1A5P35504 534 aa11.52□□□□□ -0.57
SNX13-202ENST00000409604 MDH1P40925 334 aaKnown RBP11.52□□□□□ -0.57
SNX13-202ENST00000409604 SLC25A11Q02978 314 aaKnown RBP11.52□□□□□ -0.57
SNX13-202ENST00000409604 ZNF252P-AS1Q0IIN9 211 aa11.52□□□□□ -0.57
SNX13-202ENST00000409604 RAB30Q15771 203 aa11.52□□□□□ -0.57
SNX13-202ENST00000409604 N4BP2L1Q5TBK1 243 aaPredicted RBP11.52□□□□□ -0.57
SNX13-202ENST00000409604 TMEM25Q86YD3 366 aa11.52□□□□□ -0.57
SNX13-202ENST00000409604 CMASQ8NFW8 434 aaPredicted RBP11.52□□□□□ -0.57
SNX13-202ENST00000409604 UGT1A7Q9HAW7 530 aa11.52□□□□□ -0.57
SNX13-202ENST00000409604 UGT1A10Q9HAW8 530 aa11.52□□□□□ -0.57
SNX13-202ENST00000409604 UGT1A8Q9HAW9 530 aa11.52□□□□□ -0.57
SNX13-202ENST00000409604 PAK6Q9NQU5 681 aaPredicted RBP11.52□□□□□ -0.57
SNX13-202ENST00000409604 SCML2Q9UQR0 700 aa11.52□□□□□ -0.57
SNX13-202ENST00000409604 TCRBV9S1A1TA0A576 114 aa11.52□□□□□ -0.57
SNX13-202ENST00000409604 HACD1B0YJ81 288 aa11.52□□□□□ -0.57
SNX13-202ENST00000409604 OAZ2O95190 189 aa11.52□□□□□ -0.57
SNX13-202ENST00000409604 ADRA1DP25100 572 aa11.52□□□□□ -0.57
SNX13-202ENST00000409604 ITGB8P26012 769 aa11.52□□□□□ -0.57
SNX13-202ENST00000409604 GPR1P46091 355 aa11.52□□□□□ -0.57
SNX13-202ENST00000409604 FAM83EQ2M2I3 478 aa11.52□□□□□ -0.57
SNX13-202ENST00000409604 GRAMD4Q6IC98 578 aa11.52□□□□□ -0.57
SNX13-202ENST00000409604 PAQR9Q6ZVX9 377 aa11.52□□□□□ -0.57
SNX13-202ENST00000409604 NLRP14Q86W24 1093 aa11.52□□□□□ -0.57
SNX13-202ENST00000409604 SYTL1Q8IYJ3 562 aa11.52□□□□□ -0.57
SNX13-202ENST00000409604 ZCCHC9Q8N567 271 aaKnown RBP11.52□□□□□ -0.57
SNX13-202ENST00000409604 TEKT4Q8WW24 435 aa11.52□□□□□ -0.57
SNX13-202ENST00000409604 ESAMQ96AP7 390 aa11.52□□□□□ -0.57
SNX13-202ENST00000409604 C8orf48Q96LL4 319 aa11.52□□□□□ -0.57
SNX13-202ENST00000409604 CRISPLD1Q9H336 500 aa11.52□□□□□ -0.57
SNX13-202ENST00000409604 MTRRQ9UBK8 725 aa11.52□□□□□ -0.57
SNX13-202ENST00000409604 TMEM59LQ9UK28 342 aa11.52□□□□□ -0.57
SNX13-202ENST00000409604 RWDD3Q9Y3V2 267 aa11.52□□□□□ -0.57
SNX13-202ENST00000409604 KCTD3Q9Y597 815 aa11.52□□□□□ -0.57
SNX13-202ENST00000409604 SQORQ9Y6N5 450 aa11.52□□□□□ -0.57
SNX13-202ENST00000409604 H0YGN5 161 aa11.51□□□□□ -0.57
SNX13-202ENST00000409604 BTN3A1O00481 513 aa11.51□□□□□ -0.57
SNX13-202ENST00000409604 TXNDC9O14530 226 aa11.51□□□□□ -0.57
SNX13-202ENST00000409604 ADAM17P78536 824 aa11.51□□□□□ -0.57
SNX13-202ENST00000409604 ZNF460Q14592 562 aa11.51□□□□□ -0.57
SNX13-202ENST00000409604 INSCQ1MX18 579 aa11.51□□□□□ -0.57
SNX13-202ENST00000409604 ARMCX6Q7L4S7 300 aa11.51□□□□□ -0.57
SNX13-202ENST00000409604 DENND6AQ8IWF6 608 aa11.51□□□□□ -0.57
SNX13-202ENST00000409604 RNF38Q9H0F5 515 aa11.51□□□□□ -0.57
SNX13-202ENST00000409604 ELAC1Q9H777 363 aaKnown RBP11.51□□□□□ -0.57
SNX13-202ENST00000409604 LRRC4CQ9HCJ2 640 aa11.51□□□□□ -0.57
SNX13-202ENST00000409604 GDF3Q9NR23 364 aa11.51□□□□□ -0.57
SNX13-202ENST00000409604 GRID1Q9ULK0 1009 aa11.51□□□□□ -0.57
SNX13-202ENST00000409604 TMCC1O94876 653 aa11.51□□□□□ -0.57
SNX13-202ENST00000409604 SLC25A14O95258 325 aaPredicted RBP11.51□□□□□ -0.57
SNX13-202ENST00000409604 NFATC1O95644 943 aa11.51□□□□□ -0.57
SNX13-202ENST00000409604 ELFN1P0C7U0 828 aa11.51□□□□□ -0.57
SNX13-202ENST00000409604 PGFP49763 221 aa11.51□□□□□ -0.57
SNX13-202ENST00000409604 POU4F1Q01851 419 aa11.51□□□□□ -0.57
SNX13-202ENST00000409604 PPM1JQ5JR12 505 aa11.51□□□□□ -0.57
SNX13-202ENST00000409604 USP45Q70EL2 814 aa11.51□□□□□ -0.57
SNX13-202ENST00000409604 SCD5Q86SK9 330 aa11.51□□□□□ -0.57
SNX13-202ENST00000409604 TRIM42Q8IWZ5 723 aa11.51□□□□□ -0.57
SNX13-202ENST00000409604 LINC01465Q8N7H1 131 aa11.51□□□□□ -0.57
SNX13-202ENST00000409604 CERS2Q96G23 380 aa11.51□□□□□ -0.57
SNX13-202ENST00000409604 DNAJC1Q96KC8 554 aaKnown RBP11.51□□□□□ -0.57
SNX13-202ENST00000409604 TRMT61BQ9BVS5 477 aaKnown RBP11.51□□□□□ -0.57
SNX13-202ENST00000409604 ZMYM5Q9UJ78 669 aa11.51□□□□□ -0.57
SNX13-202ENST00000409604 FAM189A1O60320 539 aa11.51□□□□□ -0.57
SNX13-202ENST00000409604 HLA-DQB2P05538 268 aa11.51□□□□□ -0.57
SNX13-202ENST00000409604 LAMB1P07942 1786 aa11.51□□□□□ -0.57
SNX13-202ENST00000409604 EPB42P16452 691 aa11.51□□□□□ -0.57
SNX13-202ENST00000409604 TCN1P20061 433 aaPredicted RBP11.51□□□□□ -0.57
SNX13-202ENST00000409604 CLDN10P78369 228 aa11.51□□□□□ -0.57
SNX13-202ENST00000409604 GABPB1Q06547 395 aaPredicted RBP11.51□□□□□ -0.57
SNX13-202ENST00000409604 ABRQ12979 859 aa11.51□□□□□ -0.57
SNX13-202ENST00000409604 TMEM240Q5SV17 173 aa11.51□□□□□ -0.57
SNX13-202ENST00000409604 CMTR2Q8IYT2 770 aaKnown RBP11.51□□□□□ -0.57
SNX13-202ENST00000409604 OR13C4Q8NGS5 318 aa11.51□□□□□ -0.57
SNX13-202ENST00000409604 BPIFB1Q8TDL5 484 aa11.51□□□□□ -0.57
SNX13-202ENST00000409604 E2F7Q96AV8 911 aa11.51□□□□□ -0.57
SNX13-202ENST00000409604 MTFMTQ96DP5 389 aaKnown RBP11.51□□□□□ -0.57
SNX13-202ENST00000409604 AGAP2Q99490 1192 aa11.51□□□□□ -0.57
SNX13-202ENST00000409604 ALG9Q9H6U8 611 aa11.51□□□□□ -0.57
SNX13-202ENST00000409604 VRTNQ9H8Y1 702 aa11.51□□□□□ -0.57
SNX13-202ENST00000409604 TMEM30AQ9NV96 361 aa11.51□□□□□ -0.57
SNX13-202ENST00000409604 TBC1D14Q9P2M4 693 aa11.51□□□□□ -0.57
SNX13-202ENST00000409604 DRG1Q9Y295 367 aaKnown RBP11.51□□□□□ -0.57
SNX13-202ENST00000409604 CCNT2O60583 730 aaKnown RBP11.5□□□□□ -0.57
SNX13-202ENST00000409604 PAX3P23760 479 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 MC4RP32245 332 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 AARSP49588 968 aaKnown RBP eCLIP11.5□□□□□ -0.57
SNX13-202ENST00000409604 MPP1Q00013 466 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 ART3Q13508 389 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 DPYSL2Q16555 572 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 GALNTL6Q49A17 601 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 COL13A1Q5TAT6 717 aaPredicted RBP11.5□□□□□ -0.57
SNX13-202ENST00000409604 LRRC34Q8IZ02 419 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms