RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 ARHGAP42A6NI28 874 aa14.75□□□□□ -0.05
NIF3L1-205ENST00000409588 C1QTNF9BB2RNN3 333 aa14.75□□□□□ -0.05
NIF3L1-205ENST00000409588 KRIT1O00522 736 aa14.75□□□□□ -0.05
NIF3L1-205ENST00000409588 DDX3XO00571 662 aaKnown RBP eCLIP14.75□□□□□ -0.05
NIF3L1-205ENST00000409588 NEMP1O14524 444 aa14.75□□□□□ -0.05
NIF3L1-205ENST00000409588 DAPK3O43293 454 aa14.75□□□□□ -0.05
NIF3L1-205ENST00000409588 TOP3BO95985 862 aaKnown RBP14.75□□□□□ -0.05
NIF3L1-205ENST00000409588 SERPING1P05155 500 aa14.75□□□□□ -0.05
NIF3L1-205ENST00000409588 ATXN1LP0C7T5 689 aaKnown RBP14.75□□□□□ -0.05
NIF3L1-205ENST00000409588 C1QTNF9P0C862 333 aa14.75□□□□□ -0.05
NIF3L1-205ENST00000409588 THEGLP0DJG4 465 aa14.75□□□□□ -0.05
NIF3L1-205ENST00000409588 SPINK2P20155 84 aa14.75□□□□□ -0.05
NIF3L1-205ENST00000409588 CSNK1DP48730 415 aa14.75□□□□□ -0.05
NIF3L1-205ENST00000409588 PIGHQ14442 188 aaPredicted RBP14.75□□□□□ -0.05
NIF3L1-205ENST00000409588 RFTN1Q14699 578 aaPredicted RBP14.75□□□□□ -0.05
NIF3L1-205ENST00000409588 SHBQ15464 509 aa14.75□□□□□ -0.05
NIF3L1-205ENST00000409588 ABI3BPQ7Z7G0 1075 aa14.75□□□□□ -0.05
NIF3L1-205ENST00000409588 TTC7BQ86TV6 843 aa14.75□□□□□ -0.05
NIF3L1-205ENST00000409588 TMPRSS12Q86WS5 348 aa14.75□□□□□ -0.05
NIF3L1-205ENST00000409588 SPATS2Q86XZ4 545 aaKnown RBP14.75□□□□□ -0.05
NIF3L1-205ENST00000409588 ZNF641Q96N77 438 aaPredicted RBP14.75□□□□□ -0.05
NIF3L1-205ENST00000409588 C1QTNF2Q9BXJ5 285 aa14.75□□□□□ -0.05
NIF3L1-205ENST00000409588 TM6SF2Q9BZW4 377 aa14.75□□□□□ -0.05
NIF3L1-205ENST00000409588 NOL6Q9H6R4 1146 aaKnown RBP14.75□□□□□ -0.05
NIF3L1-205ENST00000409588 LRRC19Q9H756 370 aa14.75□□□□□ -0.05
NIF3L1-205ENST00000409588 ZWILCHQ9H900 591 aa14.75□□□□□ -0.05
NIF3L1-205ENST00000409588 AP4E1Q9UPM8 1137 aa14.75□□□□□ -0.05
NIF3L1-205ENST00000409588 BTBD3Q9Y2F9 522 aa14.75□□□□□ -0.05
NIF3L1-205ENST00000409588 LUC7L2Q9Y383 392 aaKnown RBP14.75□□□□□ -0.05
NIF3L1-205ENST00000409588 CHD5Q8TDI0 1954 aa14.74□□□□□ -0.05
NIF3L1-205ENST00000409588 A6NNZ2 444 aa14.74□□□□□ -0.05
NIF3L1-205ENST00000409588 EEF2KO00418 725 aaKnown RBP14.74□□□□□ -0.05
NIF3L1-205ENST00000409588 FPGTO14772 594 aa14.74□□□□□ -0.05
NIF3L1-205ENST00000409588 TMCC1O94876 653 aa14.74□□□□□ -0.05
NIF3L1-205ENST00000409588 PAK4O96013 591 aaPredicted RBP14.74□□□□□ -0.05
NIF3L1-205ENST00000409588 PBX1P40424 430 aa14.74□□□□□ -0.05
NIF3L1-205ENST00000409588 RABIFP47224 123 aa14.74□□□□□ -0.05
NIF3L1-205ENST00000409588 RHOAP61586 193 aa14.74□□□□□ -0.05
NIF3L1-205ENST00000409588 OGDHQ02218 1023 aa14.74□□□□□ -0.05
NIF3L1-205ENST00000409588 NSUN2Q08J23 767 aaKnown RBP eCLIP14.74□□□□□ -0.05
NIF3L1-205ENST00000409588 SMAD1Q15797 465 aaKnown RBP14.74□□□□□ -0.05
NIF3L1-205ENST00000409588 PRAMEF14Q5SWL7 426 aa14.74□□□□□ -0.05
NIF3L1-205ENST00000409588 DNAAF5Q86Y56 855 aa14.74□□□□□ -0.05
NIF3L1-205ENST00000409588 CACTIN-AS1Q8N1I8 211 aa14.74□□□□□ -0.05
NIF3L1-205ENST00000409588 PNPLA1Q8N8W4 532 aa14.74□□□□□ -0.05
NIF3L1-205ENST00000409588 DENND6BQ8NEG7 585 aa14.74□□□□□ -0.05
NIF3L1-205ENST00000409588 C1QTNF7Q9BXJ2 289 aa14.74□□□□□ -0.05
NIF3L1-205ENST00000409588 DHX35Q9H5Z1 703 aaKnown RBP14.74□□□□□ -0.05
NIF3L1-205ENST00000409588 UBA2Q9UBT2 640 aaPredicted RBP14.74□□□□□ -0.05
NIF3L1-205ENST00000409588 LCMT1Q9UIC8 334 aa14.74□□□□□ -0.05
NIF3L1-205ENST00000409588 ZFR2Q9UPR6 939 aaKnown RBP14.74□□□□□ -0.05
NIF3L1-205ENST00000409588 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.74□□□□□ -0.05
NIF3L1-205ENST00000409588 PLXNA2O75051 1894 aa14.74□□□□□ -0.05
NIF3L1-205ENST00000409588 COL5A1P20908 1838 aaPredicted RBP14.73□□□□□ -0.05
NIF3L1-205ENST00000409588 ENC1O14682 589 aa14.73□□□□□ -0.05
NIF3L1-205ENST00000409588 AREL1O15033 823 aa14.73□□□□□ -0.05
NIF3L1-205ENST00000409588 CKMT2P17540 419 aa14.73□□□□□ -0.05
NIF3L1-205ENST00000409588 MIPP30301 263 aa14.73□□□□□ -0.05
NIF3L1-205ENST00000409588 ELP6Q0PNE2 266 aa14.73□□□□□ -0.05
NIF3L1-205ENST00000409588 ZNF211Q13398 564 aaPredicted RBP14.73□□□□□ -0.05
NIF3L1-205ENST00000409588 RFX8Q6ZV50 586 aa14.73□□□□□ -0.05
NIF3L1-205ENST00000409588 PARS2Q7L3T8 475 aaKnown RBP14.73□□□□□ -0.05
NIF3L1-205ENST00000409588 KANSL1Q7Z3B3 1105 aa14.73□□□□□ -0.05
NIF3L1-205ENST00000409588 LUZP1Q86V48 1076 aa14.73□□□□□ -0.05
NIF3L1-205ENST00000409588 GATAD2AQ86YP4 633 aa14.73□□□□□ -0.05
NIF3L1-205ENST00000409588 ZNF653Q96CK0 615 aa14.73□□□□□ -0.05
NIF3L1-205ENST00000409588 HMCESQ96FZ2 354 aa14.73□□□□□ -0.05
NIF3L1-205ENST00000409588 CNDP2Q96KP4 475 aaKnown RBP14.73□□□□□ -0.05
NIF3L1-205ENST00000409588 KLHL32Q96NJ5 620 aa14.73□□□□□ -0.05
NIF3L1-205ENST00000409588 TUBGCP5Q96RT8 1024 aa14.73□□□□□ -0.05
NIF3L1-205ENST00000409588 EVA1BQ9NVM1 165 aa14.73□□□□□ -0.05
NIF3L1-205ENST00000409588 PCSK1NQ9UHG2 260 aa14.73□□□□□ -0.05
NIF3L1-205ENST00000409588 PRAMEF11O60813 436 aa14.72□□□□□ -0.05
NIF3L1-205ENST00000409588 UGT2B4P06133 528 aa14.72□□□□□ -0.05
NIF3L1-205ENST00000409588 ALPPL2P10696 532 aa14.72□□□□□ -0.05
NIF3L1-205ENST00000409588 SKILP12757 684 aa14.72□□□□□ -0.05
NIF3L1-205ENST00000409588 PRLRP16471 622 aa14.72□□□□□ -0.05
NIF3L1-205ENST00000409588 RENBPP51606 427 aa14.72□□□□□ -0.05
NIF3L1-205ENST00000409588 HNRNPKP61978 463 aaKnown RBP eCLIP14.72□□□□□ -0.05
NIF3L1-205ENST00000409588 YPEL5P62699 121 aa14.72□□□□□ -0.05
NIF3L1-205ENST00000409588 POLR2LP62875 67 aaKnown RBP14.72□□□□□ -0.05
NIF3L1-205ENST00000409588 E2F1Q01094 437 aa14.72□□□□□ -0.05
NIF3L1-205ENST00000409588 IL9RQ01113 521 aa14.72□□□□□ -0.05
NIF3L1-205ENST00000409588 BNIP3Q12983 259 aa14.72□□□□□ -0.05
NIF3L1-205ENST00000409588 PTK2BQ14289 1009 aa14.72□□□□□ -0.05
NIF3L1-205ENST00000409588 TDRD12Q587J7 1177 aaKnown RBP14.72□□□□□ -0.05
NIF3L1-205ENST00000409588 AFMIDQ63HM1 303 aa14.72□□□□□ -0.05
NIF3L1-205ENST00000409588 HGSNATQ68CP4 663 aa14.72□□□□□ -0.05
NIF3L1-205ENST00000409588 SEL1L3Q68CR1 1132 aa14.72□□□□□ -0.05
NIF3L1-205ENST00000409588 BRAT1Q6PJG6 821 aa14.72□□□□□ -0.05
NIF3L1-205ENST00000409588 KYAT3Q6YP21 454 aaKnown RBP14.72□□□□□ -0.05
NIF3L1-205ENST00000409588 Q6ZSR6 202 aa14.72□□□□□ -0.05
NIF3L1-205ENST00000409588 LRRC49Q8IUZ0 686 aa14.72□□□□□ -0.05
NIF3L1-205ENST00000409588 EID2Q8N6I1 236 aa14.72□□□□□ -0.05
NIF3L1-205ENST00000409588 ARFGAP1Q8N6T3 406 aa14.72□□□□□ -0.05
NIF3L1-205ENST00000409588 TSC1Q92574 1164 aa14.72□□□□□ -0.05
NIF3L1-205ENST00000409588 BMFQ96LC9 184 aa14.72□□□□□ -0.05
NIF3L1-205ENST00000409588 ZNF599Q96NL3 588 aa14.72□□□□□ -0.05
NIF3L1-205ENST00000409588 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.72□□□□□ -0.05
NIF3L1-205ENST00000409588 DUSP23Q9BVJ7 150 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms