RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 BBS2Q9BXC9 721 aa14.23□□□□□ -0.13
GPNMB-203ENST00000409458 KIF9Q9HAQ2 790 aa14.23□□□□□ -0.13
GPNMB-203ENST00000409458 ARNT2Q9HBZ2 717 aa14.23□□□□□ -0.13
GPNMB-203ENST00000409458 SCUBE2Q9NQ36 999 aa14.23□□□□□ -0.13
GPNMB-203ENST00000409458 PPANQ9NQ55 473 aaKnown RBP14.23□□□□□ -0.13
GPNMB-203ENST00000409458 SPHK2Q9NRA0 654 aa14.23□□□□□ -0.13
GPNMB-203ENST00000409458 INTS6Q9UL03 887 aaKnown RBP14.23□□□□□ -0.13
GPNMB-203ENST00000409458 TNRC18O15417 2968 aaPredicted RBP14.22□□□□□ -0.13
GPNMB-203ENST00000409458 LOC285095A0A1B0GVY8 99 aa14.22□□□□□ -0.13
GPNMB-203ENST00000409458 MAGEB16A2A368 324 aa14.22□□□□□ -0.13
GPNMB-203ENST00000409458 MT-CO1P00395 513 aa14.22□□□□□ -0.13
GPNMB-203ENST00000409458 SERPINF2P08697 491 aa14.22□□□□□ -0.13
GPNMB-203ENST00000409458 ERVK-10P10266 1014 aa14.22□□□□□ -0.13
GPNMB-203ENST00000409458 KRT15P19012 456 aa14.22□□□□□ -0.13
GPNMB-203ENST00000409458 WEE1P30291 646 aa14.22□□□□□ -0.13
GPNMB-203ENST00000409458 HLA-FP30511 346 aa14.22□□□□□ -0.13
GPNMB-203ENST00000409458 VIPR2P41587 438 aa14.22□□□□□ -0.13
GPNMB-203ENST00000409458 SCNN1BP51168 640 aa14.22□□□□□ -0.13
GPNMB-203ENST00000409458 SLC14A2Q15849 920 aa14.22□□□□□ -0.13
GPNMB-203ENST00000409458 FUT11Q495W5 492 aa14.22□□□□□ -0.13
GPNMB-203ENST00000409458 INO80DQ53TQ3 878 aaPredicted RBP14.22□□□□□ -0.13
GPNMB-203ENST00000409458 PITRM1Q5JRX3 1037 aa14.22□□□□□ -0.13
GPNMB-203ENST00000409458 SIRPB2Q5JXA9 342 aa14.22□□□□□ -0.13
GPNMB-203ENST00000409458 LY6G5CQ5SRR4 150 aa14.22□□□□□ -0.13
GPNMB-203ENST00000409458 TTC19Q6DKK2 380 aaPredicted RBP14.22□□□□□ -0.13
GPNMB-203ENST00000409458 ASTLQ6HA08 431 aaPredicted RBP14.22□□□□□ -0.13
GPNMB-203ENST00000409458 SYCE2Q6PIF2 218 aa14.22□□□□□ -0.13
GPNMB-203ENST00000409458 TMEM184AQ6ZMB5 413 aa14.22□□□□□ -0.13
GPNMB-203ENST00000409458 MARK2Q7KZI7 788 aaKnown RBP14.22□□□□□ -0.13
GPNMB-203ENST00000409458 GPR149Q86SP6 731 aa14.22□□□□□ -0.13
GPNMB-203ENST00000409458 PPHLN1Q8NEY8 458 aaKnown RBP14.22□□□□□ -0.13
GPNMB-203ENST00000409458 NUDCD1Q96RS6 583 aa14.22□□□□□ -0.13
GPNMB-203ENST00000409458 ABCB8Q9NUT2 735 aa14.22□□□□□ -0.13
GPNMB-203ENST00000409458 TCAF1Q9Y4C2 921 aa14.22□□□□□ -0.13
GPNMB-203ENST00000409458 ACTL7BQ9Y614 415 aa14.22□□□□□ -0.13
GPNMB-203ENST00000409458 IKBKGQ9Y6K9 419 aa14.22□□□□□ -0.13
GPNMB-203ENST00000409458 FAM169AQ9Y6X4 670 aa14.22□□□□□ -0.13
GPNMB-203ENST00000409458 A0A1W2PPM1 405 aa14.21□□□□□ -0.13
GPNMB-203ENST00000409458 K7ERQ8 282 aa14.21□□□□□ -0.13
GPNMB-203ENST00000409458 TYRP14679 529 aa14.21□□□□□ -0.13
GPNMB-203ENST00000409458 SERPINH1P50454 418 aaKnown RBP14.21□□□□□ -0.13
GPNMB-203ENST00000409458 PLK1P53350 603 aa14.21□□□□□ -0.13
GPNMB-203ENST00000409458 GUCY1A3Q02108 690 aa14.21□□□□□ -0.13
GPNMB-203ENST00000409458 CDK18Q07002 472 aa14.21□□□□□ -0.13
GPNMB-203ENST00000409458 MGAT5Q09328 741 aa14.21□□□□□ -0.13
GPNMB-203ENST00000409458 NR1H3Q13133 447 aa14.21□□□□□ -0.13
GPNMB-203ENST00000409458 MSLNQ13421 630 aaPredicted RBP14.21□□□□□ -0.13
GPNMB-203ENST00000409458 FRG1Q14331 258 aaKnown RBP14.21□□□□□ -0.13
GPNMB-203ENST00000409458 GALNT3Q14435 633 aa14.21□□□□□ -0.13
GPNMB-203ENST00000409458 TERF2Q15554 542 aa14.21□□□□□ -0.13
GPNMB-203ENST00000409458 FAM78AQ5JUQ0 283 aa14.21□□□□□ -0.13
GPNMB-203ENST00000409458 ANKRD54Q6NXT1 300 aa14.21□□□□□ -0.13
GPNMB-203ENST00000409458 PKN3Q6P5Z2 889 aa14.21□□□□□ -0.13
GPNMB-203ENST00000409458 EFHBQ8N7U6 833 aa14.21□□□□□ -0.13
GPNMB-203ENST00000409458 MDM1Q8TC05 714 aa14.21□□□□□ -0.13
GPNMB-203ENST00000409458 FGF13Q92913 245 aa14.21□□□□□ -0.13
GPNMB-203ENST00000409458 OTUB2Q96DC9 234 aa14.21□□□□□ -0.13
GPNMB-203ENST00000409458 IFT43Q96FT9 208 aa14.21□□□□□ -0.13
GPNMB-203ENST00000409458 ASB16Q96NS5 453 aa14.21□□□□□ -0.13
GPNMB-203ENST00000409458 TRIB3Q96RU7 358 aa14.21□□□□□ -0.13
GPNMB-203ENST00000409458 CNOT10Q9H9A5 744 aaKnown RBP14.21□□□□□ -0.13
GPNMB-203ENST00000409458 MRM3Q9HC36 420 aaKnown RBP14.21□□□□□ -0.13
GPNMB-203ENST00000409458 MARK1Q9P0L2 795 aa14.21□□□□□ -0.13
GPNMB-203ENST00000409458 PRKAG3Q9UGI9 489 aa14.21□□□□□ -0.13
GPNMB-203ENST00000409458 ZNF180Q9UJW8 692 aa14.21□□□□□ -0.13
GPNMB-203ENST00000409458 ANKRD36A6QL64 1941 aa14.21□□□□□ -0.14
GPNMB-203ENST00000409458 PDE4DIPQ5VU43 2346 aa14.21□□□□□ -0.14
GPNMB-203ENST00000409458 IQANK1A0A1B0GTG1 560 aa14.2□□□□□ -0.14
GPNMB-203ENST00000409458 BRAFP15056 766 aa14.2□□□□□ -0.14
GPNMB-203ENST00000409458 CTSOP43234 321 aaPredicted RBP14.2□□□□□ -0.14
GPNMB-203ENST00000409458 RHOAP61586 193 aa14.2□□□□□ -0.14
GPNMB-203ENST00000409458 SEPT6Q14141 434 aa14.2□□□□□ -0.14
GPNMB-203ENST00000409458 TRIM68Q6AZZ1 485 aa14.2□□□□□ -0.14
GPNMB-203ENST00000409458 RETSATQ6NUM9 610 aa14.2□□□□□ -0.14
GPNMB-203ENST00000409458 ZNF449Q6P9G9 518 aa14.2□□□□□ -0.14
GPNMB-203ENST00000409458 ADGRG2Q8IZP9 1017 aa14.2□□□□□ -0.14
GPNMB-203ENST00000409458 PTCD2Q8WV60 388 aaKnown RBP14.2□□□□□ -0.14
GPNMB-203ENST00000409458 CDKL2Q92772 493 aa14.2□□□□□ -0.14
GPNMB-203ENST00000409458 ACDQ96AP0 544 aa14.2□□□□□ -0.14
GPNMB-203ENST00000409458 ASIC4Q96FT7 647 aa14.2□□□□□ -0.14
GPNMB-203ENST00000409458 TDRD1Q9BXT4 1180 aaKnown RBP14.2□□□□□ -0.14
GPNMB-203ENST00000409458 CAPS2Q9BXY5 557 aa14.2□□□□□ -0.14
GPNMB-203ENST00000409458 TRABDQ9H4I3 376 aa14.2□□□□□ -0.14
GPNMB-203ENST00000409458 GGA2Q9UJY4 613 aa14.2□□□□□ -0.14
GPNMB-203ENST00000409458 KIF26AQ9ULI4 1882 aaPredicted RBP14.2□□□□□ -0.14
GPNMB-203ENST00000409458 TMEM120BA0PK00 339 aa14.2□□□□□ -0.14
GPNMB-203ENST00000409458 SLC9A3R1O14745 358 aaPredicted RBP14.2□□□□□ -0.14
GPNMB-203ENST00000409458 SMAD6O43541 496 aaKnown RBP14.2□□□□□ -0.14
GPNMB-203ENST00000409458 SHOX2O60902 331 aaPredicted RBP14.2□□□□□ -0.14
GPNMB-203ENST00000409458 CYP17A1P05093 508 aa14.2□□□□□ -0.14
GPNMB-203ENST00000409458 PRKCGP05129 697 aa14.2□□□□□ -0.14
GPNMB-203ENST00000409458 FGF1P05230 155 aa14.2□□□□□ -0.14
GPNMB-203ENST00000409458 CHN1P15882 459 aa14.2□□□□□ -0.14
GPNMB-203ENST00000409458 HLA-DPA1P20036 260 aa14.2□□□□□ -0.14
GPNMB-203ENST00000409458 ADRA1DP25100 572 aa14.2□□□□□ -0.14
GPNMB-203ENST00000409458 MDH1P40925 334 aaKnown RBP14.2□□□□□ -0.14
GPNMB-203ENST00000409458 GNGT1P63211 74 aa14.2□□□□□ -0.14
GPNMB-203ENST00000409458 NAB1Q13506 487 aa14.2□□□□□ -0.14
GPNMB-203ENST00000409458 SLC12A1Q13621 1099 aa14.2□□□□□ -0.14
GPNMB-203ENST00000409458 BMPR2Q13873 1038 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms