RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 COPS2P61201 443 aa20.11■□□□□ 0.81
PDLIM2-207ENST00000409417 ZNF235Q14590 738 aa20.11■□□□□ 0.81
PDLIM2-207ENST00000409417 PPP2R5EQ16537 467 aa20.11■□□□□ 0.81
PDLIM2-207ENST00000409417 DCAF12L1Q5VU92 463 aa20.11■□□□□ 0.81
PDLIM2-207ENST00000409417 PEAR1Q5VY43 1037 aaPredicted RBP20.11■□□□□ 0.81
PDLIM2-207ENST00000409417 GDPD4Q6W3E5 623 aa20.11■□□□□ 0.81
PDLIM2-207ENST00000409417 BBS5Q8N3I7 341 aa20.11■□□□□ 0.81
PDLIM2-207ENST00000409417 ALG3Q92685 438 aa20.11■□□□□ 0.81
PDLIM2-207ENST00000409417 HDAC11Q96DB2 347 aa20.11■□□□□ 0.81
PDLIM2-207ENST00000409417 TUBGCP5Q96RT8 1024 aa20.11■□□□□ 0.81
PDLIM2-207ENST00000409417 PARD6AQ9NPB6 346 aa20.11■□□□□ 0.81
PDLIM2-207ENST00000409417 CAPN6Q9Y6Q1 641 aa20.11■□□□□ 0.81
PDLIM2-207ENST00000409417 CFAP54Q96N23 3096 aa20.1■□□□□ 0.81
PDLIM2-207ENST00000409417 hCG_1818297A0A087WSY0 165 aa20.1■□□□□ 0.81
PDLIM2-207ENST00000409417 TBC1D3DA0A087WVF3 549 aa20.1■□□□□ 0.81
PDLIM2-207ENST00000409417 TBC1D3IA0A087WXS9 549 aa20.1■□□□□ 0.81
PDLIM2-207ENST00000409417 TBC1D3EA0A087X179 549 aa20.1■□□□□ 0.81
PDLIM2-207ENST00000409417 TBC1D3KA0A087X1G2 549 aa20.1■□□□□ 0.81
PDLIM2-207ENST00000409417 TBC1D3FA6NER0 549 aaPredicted RBP20.1■□□□□ 0.81
PDLIM2-207ENST00000409417 C16orf96A6NNT2 1141 aa20.1■□□□□ 0.81
PDLIM2-207ENST00000409417 TBC1D3LB9A6J9 549 aa20.1■□□□□ 0.81
PDLIM2-207ENST00000409417 INSIG1O15503 277 aa20.1■□□□□ 0.81
PDLIM2-207ENST00000409417 CST8O60676 142 aa20.1■□□□□ 0.81
PDLIM2-207ENST00000409417 TBC1D3HP0C7X1 549 aa20.1■□□□□ 0.81
PDLIM2-207ENST00000409417 MMP13P45452 471 aa20.1■□□□□ 0.81
PDLIM2-207ENST00000409417 MAPK8P45983 427 aa20.1■□□□□ 0.81
PDLIM2-207ENST00000409417 NEK3P51956 506 aa20.1■□□□□ 0.81
PDLIM2-207ENST00000409417 TAS2R38P59533 333 aa20.1■□□□□ 0.81
PDLIM2-207ENST00000409417 DYNLT1P63172 113 aa20.1■□□□□ 0.81
PDLIM2-207ENST00000409417 PDK1Q15118 436 aa20.1■□□□□ 0.81
PDLIM2-207ENST00000409417 LLGL1Q15334 1064 aa20.1■□□□□ 0.81
PDLIM2-207ENST00000409417 CCDC6Q16204 474 aa20.1■□□□□ 0.81
PDLIM2-207ENST00000409417 KAZNQ674X7 775 aa20.1■□□□□ 0.81
PDLIM2-207ENST00000409417 KIAA0895LQ68EN5 471 aa20.1■□□□□ 0.81
PDLIM2-207ENST00000409417 TBC1D3GQ6DHY5 549 aa20.1■□□□□ 0.81
PDLIM2-207ENST00000409417 TBC1D3CQ6IPX1 549 aa20.1■□□□□ 0.81
PDLIM2-207ENST00000409417 FBXL19Q6PCT2 694 aa20.1■□□□□ 0.81
PDLIM2-207ENST00000409417 SRLQ86TD4 932 aa20.1■□□□□ 0.81
PDLIM2-207ENST00000409417 RGL4Q8IZJ4 473 aa20.1■□□□□ 0.81
PDLIM2-207ENST00000409417 TBC1D3Q8IZP1 549 aaPredicted RBP20.1■□□□□ 0.81
PDLIM2-207ENST00000409417 TEX26Q8N6G2 289 aa20.1■□□□□ 0.81
PDLIM2-207ENST00000409417 UBL4BQ8N7F7 174 aa20.1■□□□□ 0.81
PDLIM2-207ENST00000409417 CCNYQ8ND76 341 aa20.1■□□□□ 0.81
PDLIM2-207ENST00000409417 UBE2Q2Q8WVN8 375 aa20.1■□□□□ 0.81
PDLIM2-207ENST00000409417 MAML1Q92585 1016 aa20.1■□□□□ 0.81
PDLIM2-207ENST00000409417 BIRC7Q96CA5 298 aa20.1■□□□□ 0.81
PDLIM2-207ENST00000409417 ZNF641Q96N77 438 aaPredicted RBP20.1■□□□□ 0.81
PDLIM2-207ENST00000409417 KLHL32Q96NJ5 620 aa20.1■□□□□ 0.81
PDLIM2-207ENST00000409417 OLFM3Q96PB7 478 aa20.1■□□□□ 0.81
PDLIM2-207ENST00000409417 DKK3Q9UBP4 350 aa20.1■□□□□ 0.81
PDLIM2-207ENST00000409417 TPX2Q9ULW0 747 aaKnown RBP20.1■□□□□ 0.81
PDLIM2-207ENST00000409417 FOXD2O60548 495 aaPredicted RBP20.09■□□□□ 0.81
PDLIM2-207ENST00000409417 FSBPO95073 299 aa20.09■□□□□ 0.81
PDLIM2-207ENST00000409417 FTCDO95954 541 aa20.09■□□□□ 0.81
PDLIM2-207ENST00000409417 IGHV4-34P06331 123 aa20.09■□□□□ 0.81
PDLIM2-207ENST00000409417 ADRB3P13945 408 aa20.09■□□□□ 0.81
PDLIM2-207ENST00000409417 TGM2P21980 687 aa20.09■□□□□ 0.81
PDLIM2-207ENST00000409417 SCNN1BP51168 640 aa20.09■□□□□ 0.81
PDLIM2-207ENST00000409417 CCR5P51681 352 aa20.09■□□□□ 0.81
PDLIM2-207ENST00000409417 AP1S1P61966 158 aa20.09■□□□□ 0.81
PDLIM2-207ENST00000409417 PPIDQ08752 370 aaKnown RBP20.09■□□□□ 0.81
PDLIM2-207ENST00000409417 BZW1Q7L1Q6 419 aaKnown RBP20.09■□□□□ 0.81
PDLIM2-207ENST00000409417 PARS2Q7L3T8 475 aaKnown RBP20.09■□□□□ 0.81
PDLIM2-207ENST00000409417 RABEPKQ7Z6M1 372 aa20.09■□□□□ 0.81
PDLIM2-207ENST00000409417 HCAR2Q8TDS4 363 aa20.09■□□□□ 0.81
PDLIM2-207ENST00000409417 LGMNQ99538 433 aa20.09■□□□□ 0.81
PDLIM2-207ENST00000409417 MGME1Q9BQP7 344 aa20.09■□□□□ 0.81
PDLIM2-207ENST00000409417 BRD8Q9H0E9 1235 aa20.09■□□□□ 0.81
PDLIM2-207ENST00000409417 PREBQ9HCU5 417 aa20.09■□□□□ 0.81
PDLIM2-207ENST00000409417 LZTFL1Q9NQ48 299 aa20.09■□□□□ 0.81
PDLIM2-207ENST00000409417 SUSD2Q9UGT4 822 aa20.09■□□□□ 0.81
PDLIM2-207ENST00000409417 EFR3BQ9Y2G0 817 aa20.09■□□□□ 0.81
PDLIM2-207ENST00000409417 PPP2R2CQ9Y2T4 447 aa20.09■□□□□ 0.81
PDLIM2-207ENST00000409417 PTMAP06454 111 aaKnown RBP20.08■□□□□ 0.81
PDLIM2-207ENST00000409417 CCNB1P14635 433 aa20.08■□□□□ 0.81
PDLIM2-207ENST00000409417 CD27P26842 260 aa20.08■□□□□ 0.81
PDLIM2-207ENST00000409417 MAOBP27338 520 aa20.08■□□□□ 0.81
PDLIM2-207ENST00000409417 PTPN7P35236 360 aa20.08■□□□□ 0.81
PDLIM2-207ENST00000409417 ADCY2Q08462 1091 aa20.08■□□□□ 0.81
PDLIM2-207ENST00000409417 NEK5Q6P3R8 708 aa20.08■□□□□ 0.81
PDLIM2-207ENST00000409417 NPNTQ6UXI9 565 aa20.08■□□□□ 0.81
PDLIM2-207ENST00000409417 BBS12Q6ZW61 710 aa20.08■□□□□ 0.81
PDLIM2-207ENST00000409417 CCDC13Q8IYE1 715 aa20.08■□□□□ 0.81
PDLIM2-207ENST00000409417 PGBD5Q8N414 524 aa20.08■□□□□ 0.81
PDLIM2-207ENST00000409417 CEP76Q8TAP6 659 aa20.08■□□□□ 0.81
PDLIM2-207ENST00000409417 SNX19Q92543 992 aa20.08■□□□□ 0.81
PDLIM2-207ENST00000409417 SUV39H2Q9H5I1 410 aa20.08■□□□□ 0.81
PDLIM2-207ENST00000409417 ATP13A3Q9H7F0 1226 aa20.08■□□□□ 0.81
PDLIM2-207ENST00000409417 EIF2B4Q9UI10 523 aaKnown RBP20.08■□□□□ 0.81
PDLIM2-207ENST00000409417 ATXN2Q99700 1313 aaKnown RBP20.08■□□□□ 0.8
PDLIM2-207ENST00000409417 CEP192Q8TEP8 1941 aa20.08■□□□□ 0.8
PDLIM2-207ENST00000409417 PPP1R12AO14974 1030 aaPredicted RBP20.07■□□□□ 0.8
PDLIM2-207ENST00000409417 LATO43561 262 aa20.07■□□□□ 0.8
PDLIM2-207ENST00000409417 PIGNO95427 931 aa20.07■□□□□ 0.8
PDLIM2-207ENST00000409417 GNSP15586 552 aa20.07■□□□□ 0.8
PDLIM2-207ENST00000409417 CR2P20023 1033 aa20.07■□□□□ 0.8
PDLIM2-207ENST00000409417 CETN2P41208 172 aa20.07■□□□□ 0.8
PDLIM2-207ENST00000409417 RALGPS1Q5JS13 557 aa20.07■□□□□ 0.8
PDLIM2-207ENST00000409417 TRIM69Q86WT6 500 aa20.07■□□□□ 0.8
PDLIM2-207ENST00000409417 CAMK1DQ8IU85 385 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms