RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 TRMT5Q32P41 509 aaKnown RBP25.28■■□□□ 1.64
SPIRE1-202ENST00000409402 AGMOQ6ZNB7 445 aa25.28■■□□□ 1.64
SPIRE1-202ENST00000409402 NPAS4Q8IUM7 802 aa25.28■■□□□ 1.64
SPIRE1-202ENST00000409402 ADI1Q9BV57 179 aa25.28■■□□□ 1.64
SPIRE1-202ENST00000409402 INVSQ9Y283 1065 aa25.28■■□□□ 1.64
SPIRE1-202ENST00000409402 BTNL10A8MVZ5 291 aa25.28■■□□□ 1.64
SPIRE1-202ENST00000409402 ISM1B1AKI9 464 aa25.28■■□□□ 1.64
SPIRE1-202ENST00000409402 ATG7O95352 703 aa25.28■■□□□ 1.64
SPIRE1-202ENST00000409402 INHAP05111 366 aa25.28■■□□□ 1.64
SPIRE1-202ENST00000409402 ADRM1Q16186 407 aa25.28■■□□□ 1.64
SPIRE1-202ENST00000409402 hCG_1818297A0A087WSY0 165 aa25.28■■□□□ 1.64
SPIRE1-202ENST00000409402 ZNF844Q08AG5 666 aa25.28■■□□□ 1.64
SPIRE1-202ENST00000409402 ECM1Q16610 540 aa25.28■■□□□ 1.64
SPIRE1-202ENST00000409402 ZNF75CPQ92670 426 aaPredicted RBP25.28■■□□□ 1.64
SPIRE1-202ENST00000409402 MYO19Q96H55 970 aa25.28■■□□□ 1.64
SPIRE1-202ENST00000409402 TMEM216Q9P0N5 145 aa25.28■■□□□ 1.64
SPIRE1-202ENST00000409402 GSAPA4D1B5 854 aa25.27■■□□□ 1.64
SPIRE1-202ENST00000409402 KCNH1O95259 989 aa25.27■■□□□ 1.64
SPIRE1-202ENST00000409402 VAV1P15498 845 aa25.27■■□□□ 1.64
SPIRE1-202ENST00000409402 CYP3A5P20815 502 aa25.27■■□□□ 1.64
SPIRE1-202ENST00000409402 HEXDCQ8WVB3 486 aa25.27■■□□□ 1.64
SPIRE1-202ENST00000409402 MYOCQ99972 504 aa25.27■■□□□ 1.64
SPIRE1-202ENST00000409402 A0A0G2JLL6 359 aaPredicted RBP25.27■■□□□ 1.64
SPIRE1-202ENST00000409402 MAGEA13PA6NCF6 341 aa25.27■■□□□ 1.64
SPIRE1-202ENST00000409402 SAC3D1A6NKF1 404 aa25.27■■□□□ 1.64
SPIRE1-202ENST00000409402 TGFB1I1O43294 461 aa25.27■■□□□ 1.64
SPIRE1-202ENST00000409402 H2AFXP16104 143 aaPredicted RBP25.27■■□□□ 1.64
SPIRE1-202ENST00000409402 SMPD1P17405 629 aa25.27■■□□□ 1.64
SPIRE1-202ENST00000409402 ABRQ12979 859 aa25.27■■□□□ 1.64
SPIRE1-202ENST00000409402 C16orf72Q14CZ0 275 aa25.27■■□□□ 1.64
SPIRE1-202ENST00000409402 PRRT2Q7Z6L0 340 aaPredicted RBP25.27■■□□□ 1.64
SPIRE1-202ENST00000409402 LZTS1Q9Y250 596 aa25.27■■□□□ 1.64
SPIRE1-202ENST00000409402 TSHRP16473 764 aa25.27■■□□□ 1.64
SPIRE1-202ENST00000409402 TYW3Q6IPR3 259 aaKnown RBP25.27■■□□□ 1.64
SPIRE1-202ENST00000409402 LGMNQ99538 433 aa25.27■■□□□ 1.64
SPIRE1-202ENST00000409402 SEZ6LQ9BYH1 1024 aa25.27■■□□□ 1.64
SPIRE1-202ENST00000409402 GMIPQ9P107 970 aa25.27■■□□□ 1.64
SPIRE1-202ENST00000409402 PAICSP22234 425 aaKnown RBP25.27■■□□□ 1.64
SPIRE1-202ENST00000409402 TRIT1Q9H3H1 467 aaKnown RBP25.27■■□□□ 1.64
SPIRE1-202ENST00000409402 DCLRE1BQ9H816 532 aa25.27■■□□□ 1.64
SPIRE1-202ENST00000409402 ATP6V1HQ9UI12 483 aa25.27■■□□□ 1.64
SPIRE1-202ENST00000409402 PCDHB9Q9Y5E1 797 aa25.27■■□□□ 1.64
SPIRE1-202ENST00000409402 PCDHGA4Q9Y5G9 962 aa25.27■■□□□ 1.64
SPIRE1-202ENST00000409402 FEN1P39748 380 aaKnown RBP25.26■■□□□ 1.63
SPIRE1-202ENST00000409402 KPNB1Q14974 876 aaKnown RBP25.26■■□□□ 1.63
SPIRE1-202ENST00000409402 CREG2Q8IUH2 290 aa25.26■■□□□ 1.63
SPIRE1-202ENST00000409402 DSELQ8IZU8 1212 aa25.26■■□□□ 1.63
SPIRE1-202ENST00000409402 COPS8Q99627 209 aa25.26■■□□□ 1.63
SPIRE1-202ENST00000409402 ZDHHC20Q5W0Z9 365 aa25.26■■□□□ 1.63
SPIRE1-202ENST00000409402 C16orf46Q6P387 395 aa25.26■■□□□ 1.63
SPIRE1-202ENST00000409402 COMMD2Q86X83 199 aa25.26■■□□□ 1.63
SPIRE1-202ENST00000409402 ZNF232Q9UNY5 417 aa25.26■■□□□ 1.63
SPIRE1-202ENST00000409402 SLC12A4Q9UP95 1085 aa25.26■■□□□ 1.63
SPIRE1-202ENST00000409402 OR10H2O60403 315 aa25.26■■□□□ 1.63
SPIRE1-202ENST00000409402 TSPAN1O60635 241 aa25.26■■□□□ 1.63
SPIRE1-202ENST00000409402 FAM153BP0C7A2 387 aa25.26■■□□□ 1.63
SPIRE1-202ENST00000409402 ATP5F1P24539 256 aaPredicted RBP25.26■■□□□ 1.63
SPIRE1-202ENST00000409402 FAM153CQ494X1 144 aa25.26■■□□□ 1.63
SPIRE1-202ENST00000409402 CYB5D1Q6P9G0 228 aa25.26■■□□□ 1.63
SPIRE1-202ENST00000409402 FOXR2Q6PJQ5 311 aa25.26■■□□□ 1.63
SPIRE1-202ENST00000409402 STRADAQ7RTN6 431 aa25.26■■□□□ 1.63
SPIRE1-202ENST00000409402 ADAMTSL2Q86TH1 951 aa25.26■■□□□ 1.63
SPIRE1-202ENST00000409402 ROGDIQ9GZN7 287 aa25.26■■□□□ 1.63
SPIRE1-202ENST00000409402 PDZD7Q9H5P4 517 aa25.26■■□□□ 1.63
SPIRE1-202ENST00000409402 ARIH1Q9Y4X5 557 aaPredicted RBP25.26■■□□□ 1.63
SPIRE1-202ENST00000409402 A0A1B0GW55 424 aa25.26■■□□□ 1.63
SPIRE1-202ENST00000409402 ACSL4O60488 711 aa25.26■■□□□ 1.63
SPIRE1-202ENST00000409402 PPP1R11O60927 126 aaPredicted RBP25.26■■□□□ 1.63
SPIRE1-202ENST00000409402 OR4Q2P0C623 313 aa25.26■■□□□ 1.63
SPIRE1-202ENST00000409402 DUX4L2P0CJ85 424 aa25.26■■□□□ 1.63
SPIRE1-202ENST00000409402 DUX4L3P0CJ86 424 aa25.26■■□□□ 1.63
SPIRE1-202ENST00000409402 DUX4L4P0CJ87 422 aa25.26■■□□□ 1.63
SPIRE1-202ENST00000409402 DUX4L5P0CJ88 424 aa25.26■■□□□ 1.63
SPIRE1-202ENST00000409402 DUX4L6P0CJ89 424 aa25.26■■□□□ 1.63
SPIRE1-202ENST00000409402 DUX4L7P0CJ90 424 aa25.26■■□□□ 1.63
SPIRE1-202ENST00000409402 RPL7AP62424 266 aaKnown RBP25.26■■□□□ 1.63
SPIRE1-202ENST00000409402 ATAD1Q8NBU5 361 aa25.26■■□□□ 1.63
SPIRE1-202ENST00000409402 DUX4Q9UBX2 424 aa25.26■■□□□ 1.63
SPIRE1-202ENST00000409402 H3BN98 237 aa25.26■■□□□ 1.63
SPIRE1-202ENST00000409402 PIRTP0C851 137 aa25.26■■□□□ 1.63
SPIRE1-202ENST00000409402 GLMNQ92990 594 aa25.26■■□□□ 1.63
SPIRE1-202ENST00000409402 RPL3P39023 403 aaKnown RBP25.25■■□□□ 1.63
SPIRE1-202ENST00000409402 PRKAG1P54619 331 aa25.25■■□□□ 1.63
SPIRE1-202ENST00000409402 INTS6LQ5JSJ4 861 aaKnown RBP25.25■■□□□ 1.63
SPIRE1-202ENST00000409402 RBFAQ8N0V3 343 aa25.25■■□□□ 1.63
SPIRE1-202ENST00000409402 PCYOX1Q9UHG3 505 aa25.25■■□□□ 1.63
SPIRE1-202ENST00000409402 CORO1AP31146 461 aaKnown RBP25.25■■□□□ 1.63
SPIRE1-202ENST00000409402 CFAP52Q8N1V2 620 aa25.25■■□□□ 1.63
SPIRE1-202ENST00000409402 OR4L1Q8NH43 312 aa25.25■■□□□ 1.63
SPIRE1-202ENST00000409402 NDNQ99608 321 aa25.25■■□□□ 1.63
SPIRE1-202ENST00000409402 PDP2Q9P2J9 529 aa25.25■■□□□ 1.63
SPIRE1-202ENST00000409402 SYN3O14994 580 aa25.25■■□□□ 1.63
SPIRE1-202ENST00000409402 LGR5O75473 907 aa25.25■■□□□ 1.63
SPIRE1-202ENST00000409402 UBOX5O94941 541 aa25.25■■□□□ 1.63
SPIRE1-202ENST00000409402 ANXA6P08133 673 aa25.25■■□□□ 1.63
SPIRE1-202ENST00000409402 IFI35P80217 286 aaPredicted RBP25.25■■□□□ 1.63
SPIRE1-202ENST00000409402 ARSHQ5FYA8 562 aa25.25■■□□□ 1.63
SPIRE1-202ENST00000409402 KLHL35Q6PF15 583 aa25.25■■□□□ 1.63
SPIRE1-202ENST00000409402 CNSTQ6PJW8 725 aa25.25■■□□□ 1.63
SPIRE1-202ENST00000409402 SNX32Q86XE0 403 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms