RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 OR52K1Q8NGK4 314 aa17.04■□□□□ 0.32
SSB-202ENST00000409333 TBL1YQ9BQ87 522 aa17.04■□□□□ 0.32
SSB-202ENST00000409333 WDR83Q9BRX9 315 aaKnown RBP17.04■□□□□ 0.32
SSB-202ENST00000409333 FSD1LQ9BXM9 530 aa17.04■□□□□ 0.32
SSB-202ENST00000409333 ARFGAP3Q9NP61 516 aa17.04■□□□□ 0.32
SSB-202ENST00000409333 SAYSD1Q9NPB0 183 aa17.04■□□□□ 0.32
SSB-202ENST00000409333 TRPV5Q9NQA5 729 aa17.04■□□□□ 0.32
SSB-202ENST00000409333 TTC34A8MYJ7 566 aa17.03■□□□□ 0.32
SSB-202ENST00000409333 LOC730098B7Z3J9 87 aa17.03■□□□□ 0.32
SSB-202ENST00000409333 E7ESA3 106 aa17.03■□□□□ 0.32
SSB-202ENST00000409333 SRPRAP08240 638 aaKnown RBP17.03■□□□□ 0.32
SSB-202ENST00000409333 CTHP32929 405 aa17.03■□□□□ 0.32
SSB-202ENST00000409333 MAGEA3P43357 314 aa17.03■□□□□ 0.32
SSB-202ENST00000409333 GALK1P51570 392 aa17.03■□□□□ 0.32
SSB-202ENST00000409333 SARNPP82979 210 aaKnown RBP17.03■□□□□ 0.32
SSB-202ENST00000409333 EIF4HQ15056 248 aaKnown RBP17.03■□□□□ 0.32
SSB-202ENST00000409333 BBS9Q3SYG4 887 aa17.03■□□□□ 0.32
SSB-202ENST00000409333 UBAP2Q5T6F2 1119 aaKnown RBP17.03■□□□□ 0.32
SSB-202ENST00000409333 NAPEPLDQ6IQ20 393 aa17.03■□□□□ 0.32
SSB-202ENST00000409333 NCEH1Q6PIU2 408 aa17.03■□□□□ 0.32
SSB-202ENST00000409333 Q6ZVU0 165 aa17.03■□□□□ 0.32
SSB-202ENST00000409333 CENPUQ71F23 418 aa17.03■□□□□ 0.32
SSB-202ENST00000409333 SRLQ86TD4 932 aa17.03■□□□□ 0.32
SSB-202ENST00000409333 OR2AP1Q8NGE2 309 aa17.03■□□□□ 0.32
SSB-202ENST00000409333 ISG20Q96AZ6 181 aaKnown RBP17.03■□□□□ 0.32
SSB-202ENST00000409333 CEP44Q9C0F1 390 aa17.03■□□□□ 0.32
SSB-202ENST00000409333 XAB2Q9HCS7 855 aaKnown RBP17.03■□□□□ 0.32
SSB-202ENST00000409333 CASS4Q9NQ75 786 aa17.03■□□□□ 0.32
SSB-202ENST00000409333 EVLQ9UI08 416 aaPredicted RBP17.03■□□□□ 0.32
SSB-202ENST00000409333 TRIOO75962 3097 aa17.02■□□□□ 0.32
SSB-202ENST00000409333 ATP9BO43861 1147 aa17.02■□□□□ 0.32
SSB-202ENST00000409333 BNIP3LO60238 219 aa17.02■□□□□ 0.32
SSB-202ENST00000409333 IGSF6O95976 241 aa17.02■□□□□ 0.32
SSB-202ENST00000409333 APODP05090 189 aa17.02■□□□□ 0.32
SSB-202ENST00000409333 GKP32189 559 aa17.02■□□□□ 0.32
SSB-202ENST00000409333 GRIA2P42262 883 aa17.02■□□□□ 0.32
SSB-202ENST00000409333 CHRNA4P43681 627 aa17.02■□□□□ 0.32
SSB-202ENST00000409333 ANKMY2Q8IV38 441 aa17.02■□□□□ 0.32
SSB-202ENST00000409333 ZBED8Q8IZ13 594 aa17.02■□□□□ 0.32
SSB-202ENST00000409333 PCDH20Q8N6Y1 951 aaKnown RBP17.02■□□□□ 0.32
SSB-202ENST00000409333 ZNF366Q8N895 744 aa17.02■□□□□ 0.32
SSB-202ENST00000409333 FRS2Q8WU20 508 aa17.02■□□□□ 0.32
SSB-202ENST00000409333 DNASE1L2Q92874 299 aa17.02■□□□□ 0.32
SSB-202ENST00000409333 P2RY13Q9BPV8 354 aa17.02■□□□□ 0.32
SSB-202ENST00000409333 FRMD8Q9BZ67 464 aaPredicted RBP17.02■□□□□ 0.32
SSB-202ENST00000409333 TSPYL1Q9H0U9 437 aa17.02■□□□□ 0.32
SSB-202ENST00000409333 CDC42EP4Q9H3Q1 356 aaKnown RBP17.02■□□□□ 0.32
SSB-202ENST00000409333 MTG2Q9H4K7 406 aa17.02■□□□□ 0.32
SSB-202ENST00000409333 ZDHHC4Q9NPG8 344 aa17.02■□□□□ 0.32
SSB-202ENST00000409333 HCN2Q9UL51 889 aa17.02■□□□□ 0.32
SSB-202ENST00000409333 PIAS3Q9Y6X2 628 aa17.02■□□□□ 0.32
SSB-202ENST00000409333 GSRP00390 522 aa17.02■□□□□ 0.31
SSB-202ENST00000409333 MLNP12872 115 aa17.02■□□□□ 0.31
SSB-202ENST00000409333 CES1P23141 567 aa17.02■□□□□ 0.31
SSB-202ENST00000409333 MAGEA4P43358 317 aa17.02■□□□□ 0.31
SSB-202ENST00000409333 VASPP50552 380 aaPredicted RBP17.02■□□□□ 0.31
SSB-202ENST00000409333 PMS2P54278 862 aa17.02■□□□□ 0.31
SSB-202ENST00000409333 SESN2P58004 480 aaPredicted RBP17.02■□□□□ 0.31
SSB-202ENST00000409333 SNRPD1P62314 119 aaKnown RBP17.02■□□□□ 0.31
SSB-202ENST00000409333 SLMAPQ14BN4 828 aa17.02■□□□□ 0.31
SSB-202ENST00000409333 SLC14A2Q15849 920 aa17.02■□□□□ 0.31
SSB-202ENST00000409333 DENND5AQ6IQ26 1287 aa17.02■□□□□ 0.31
SSB-202ENST00000409333 RANBP10Q6VN20 620 aa17.02■□□□□ 0.31
SSB-202ENST00000409333 LINC00523Q86TU6 105 aa17.02■□□□□ 0.31
SSB-202ENST00000409333 MPP5Q8N3R9 675 aa17.02■□□□□ 0.31
SSB-202ENST00000409333 RYBPQ8N488 228 aaPredicted RBP17.02■□□□□ 0.31
SSB-202ENST00000409333 SLC25A41Q8N5S1 370 aa17.02■□□□□ 0.31
SSB-202ENST00000409333 EZH1Q92800 747 aaPredicted RBP17.02■□□□□ 0.31
SSB-202ENST00000409333 C9orf72Q96LT7 481 aa17.02■□□□□ 0.31
SSB-202ENST00000409333 TDRD1Q9BXT4 1180 aaKnown RBP17.02■□□□□ 0.31
SSB-202ENST00000409333 PHACTR1Q9C0D0 580 aa17.02■□□□□ 0.31
SSB-202ENST00000409333 SEMA4AQ9H3S1 761 aa17.02■□□□□ 0.31
SSB-202ENST00000409333 PCDHGC4Q9Y5F7 938 aa17.02■□□□□ 0.31
SSB-202ENST00000409333 TIMM44O43615 452 aa17.01■□□□□ 0.31
SSB-202ENST00000409333 MGAT1P26572 445 aa17.01■□□□□ 0.31
SSB-202ENST00000409333 NNMTP40261 264 aa17.01■□□□□ 0.31
SSB-202ENST00000409333 CSNK1DP48730 415 aa17.01■□□□□ 0.31
SSB-202ENST00000409333 ST8SIA6P61647 398 aa17.01■□□□□ 0.31
SSB-202ENST00000409333 AP1S1P61966 158 aa17.01■□□□□ 0.31
SSB-202ENST00000409333 CRADDP78560 199 aa17.01■□□□□ 0.31
SSB-202ENST00000409333 CDH17Q12864 832 aa17.01■□□□□ 0.31
SSB-202ENST00000409333 TRAF2Q12933 501 aa17.01■□□□□ 0.31
SSB-202ENST00000409333 TDGQ13569 410 aa17.01■□□□□ 0.31
SSB-202ENST00000409333 UAP1Q16222 522 aaPredicted RBP17.01■□□□□ 0.31
SSB-202ENST00000409333 PREPLQ4J6C6 727 aaPredicted RBP17.01■□□□□ 0.31
SSB-202ENST00000409333 FNDC3BQ53EP0 1204 aaKnown RBP17.01■□□□□ 0.31
SSB-202ENST00000409333 RALGPS1Q5JS13 557 aa17.01■□□□□ 0.31
SSB-202ENST00000409333 DPY19L3Q6ZPD9 716 aa17.01■□□□□ 0.31
SSB-202ENST00000409333 IGDCC3Q8IVU1 814 aa17.01■□□□□ 0.31
SSB-202ENST00000409333 DNAAF3Q8N9W5 541 aa17.01■□□□□ 0.31
SSB-202ENST00000409333 VOPP1Q96AW1 172 aa17.01■□□□□ 0.31
SSB-202ENST00000409333 PLA2G4CQ9UP65 541 aa17.01■□□□□ 0.31
SSB-202ENST00000409333 CHMP2BQ9UQN3 213 aa17.01■□□□□ 0.31
SSB-202ENST00000409333 RAI2Q9Y5P3 530 aa17.01■□□□□ 0.31
SSB-202ENST00000409333 SCN8AQ9UQD0 1980 aa17.01■□□□□ 0.31
SSB-202ENST00000409333 LOC285095A0A1B0GVY8 99 aa17■□□□□ 0.31
SSB-202ENST00000409333 EIF3HO15372 352 aaKnown RBP eCLIP17■□□□□ 0.31
SSB-202ENST00000409333 PIGNO95427 931 aa17■□□□□ 0.31
SSB-202ENST00000409333 BMP1P13497 986 aa17■□□□□ 0.31
SSB-202ENST00000409333 HLA-EP13747 358 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms