RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 CATSPER1Q8NEC5 780 aa13.12□□□□□ -0.31
PTPRN-202ENST00000409251 MAGEE2Q8TD90 523 aaPredicted RBP13.12□□□□□ -0.31
PTPRN-202ENST00000409251 TRIB2Q92519 343 aa13.12□□□□□ -0.31
PTPRN-202ENST00000409251 PEBP4Q96S96 227 aa13.12□□□□□ -0.31
PTPRN-202ENST00000409251 DHRS4Q9BTZ2 278 aa13.12□□□□□ -0.31
PTPRN-202ENST00000409251 ASNSD1Q9NWL6 643 aa13.12□□□□□ -0.31
PTPRN-202ENST00000409251 GID8Q9NWU2 228 aa13.12□□□□□ -0.31
PTPRN-202ENST00000409251 RNF11Q9Y3C5 154 aa13.12□□□□□ -0.31
PTPRN-202ENST00000409251 WDR81Q562E7 1941 aa13.11□□□□□ -0.31
PTPRN-202ENST00000409251 SH3PXD2BA1X283 911 aa13.11□□□□□ -0.31
PTPRN-202ENST00000409251 FBXO21O94952 628 aa13.11□□□□□ -0.31
PTPRN-202ENST00000409251 OXSR1O95747 527 aaPredicted RBP13.11□□□□□ -0.31
PTPRN-202ENST00000409251 PORP16435 677 aaPredicted RBP13.11□□□□□ -0.31
PTPRN-202ENST00000409251 CCND3P30281 292 aaPredicted RBP13.11□□□□□ -0.31
PTPRN-202ENST00000409251 GABRB2P47870 512 aa13.11□□□□□ -0.31
PTPRN-202ENST00000409251 TCEAL1Q15170 157 aa13.11□□□□□ -0.31
PTPRN-202ENST00000409251 TRPV1Q8NER1 839 aa13.11□□□□□ -0.31
PTPRN-202ENST00000409251 DQX1Q8TE96 717 aaKnown RBP13.11□□□□□ -0.31
PTPRN-202ENST00000409251 CCDC138Q96M89 665 aa13.11□□□□□ -0.31
PTPRN-202ENST00000409251 PPP1R10Q96QC0 940 aaKnown RBP13.11□□□□□ -0.31
PTPRN-202ENST00000409251 EBNA1BP2Q99848 306 aaKnown RBP13.11□□□□□ -0.31
PTPRN-202ENST00000409251 MED10Q9BTT4 135 aa13.11□□□□□ -0.31
PTPRN-202ENST00000409251 C1orf21Q9H246 121 aa13.11□□□□□ -0.31
PTPRN-202ENST00000409251 TMPRSS4Q9NRS4 437 aa13.11□□□□□ -0.31
PTPRN-202ENST00000409251 SNX15Q9NRS6 342 aa13.11□□□□□ -0.31
PTPRN-202ENST00000409251 ZDHHC7Q9NXF8 308 aa13.11□□□□□ -0.31
PTPRN-202ENST00000409251 CITO14578 2027 aa13.11□□□□□ -0.31
PTPRN-202ENST00000409251 HTR3EA5X5Y0 456 aa13.11□□□□□ -0.31
PTPRN-202ENST00000409251 NEMP2A6NFY4 417 aa13.11□□□□□ -0.31
PTPRN-202ENST00000409251 CFAP99D6REC4 459 aa13.11□□□□□ -0.31
PTPRN-202ENST00000409251 F8W810 466 aa13.11□□□□□ -0.31
PTPRN-202ENST00000409251 GAS2O43903 313 aaKnown RBP13.11□□□□□ -0.31
PTPRN-202ENST00000409251 B4GALT4O60513 344 aa13.11□□□□□ -0.31
PTPRN-202ENST00000409251 ZNF24P17028 368 aa13.11□□□□□ -0.31
PTPRN-202ENST00000409251 CLDN10P78369 228 aa13.11□□□□□ -0.31
PTPRN-202ENST00000409251 PPP1R8Q12972 351 aaKnown RBP13.11□□□□□ -0.31
PTPRN-202ENST00000409251 ARL13AQ5H913 290 aaPredicted RBP13.11□□□□□ -0.31
PTPRN-202ENST00000409251 PMF1Q6P1K2 205 aa13.11□□□□□ -0.31
PTPRN-202ENST00000409251 NOTUMQ6P988 496 aa13.11□□□□□ -0.31
PTPRN-202ENST00000409251 ZC3H7AQ8IWR0 971 aaKnown RBP13.11□□□□□ -0.31
PTPRN-202ENST00000409251 PHF21BQ96EK2 531 aa13.11□□□□□ -0.31
PTPRN-202ENST00000409251 RHOBTB2Q9BYZ6 727 aa13.11□□□□□ -0.31
PTPRN-202ENST00000409251 UPF3AQ9H1J1 476 aaKnown RBP13.11□□□□□ -0.31
PTPRN-202ENST00000409251 MIR1-1HGQ9H1L0 117 aa13.11□□□□□ -0.31
PTPRN-202ENST00000409251 TRMT13Q9NUP7 481 aaKnown RBP13.11□□□□□ -0.31
PTPRN-202ENST00000409251 CDYLQ9Y232 598 aa13.11□□□□□ -0.31
PTPRN-202ENST00000409251 RGSL1A5PLK6 1076 aa13.11□□□□□ -0.31
PTPRN-202ENST00000409251 CLOCKO15516 846 aa13.11□□□□□ -0.31
PTPRN-202ENST00000409251 SPAG6O75602 509 aa13.11□□□□□ -0.31
PTPRN-202ENST00000409251 CYP3A5P20815 502 aa13.11□□□□□ -0.31
PTPRN-202ENST00000409251 MTA1Q13330 715 aa13.11□□□□□ -0.31
PTPRN-202ENST00000409251 STILQ15468 1287 aa13.11□□□□□ -0.31
PTPRN-202ENST00000409251 TBCELQ5QJ74 424 aa13.11□□□□□ -0.31
PTPRN-202ENST00000409251 SIX5Q8N196 739 aa13.11□□□□□ -0.31
PTPRN-202ENST00000409251 VPS50Q96JG6 964 aa13.11□□□□□ -0.31
PTPRN-202ENST00000409251 GATA5Q9BWX5 397 aaPredicted RBP13.11□□□□□ -0.31
PTPRN-202ENST00000409251 MYO7AQ13402 2215 aa13.1□□□□□ -0.31
PTPRN-202ENST00000409251 E7ENX8 843 aa13.1□□□□□ -0.31
PTPRN-202ENST00000409251 PTGES3LE9PB15 166 aa13.1□□□□□ -0.31
PTPRN-202ENST00000409251 ADAM23O75077 832 aa13.1□□□□□ -0.31
PTPRN-202ENST00000409251 PROZP22891 400 aa13.1□□□□□ -0.31
PTPRN-202ENST00000409251 GARSP41250 739 aaKnown RBP13.1□□□□□ -0.31
PTPRN-202ENST00000409251 GRIA4P48058 902 aa13.1□□□□□ -0.31
PTPRN-202ENST00000409251 USP10Q14694 798 aaKnown RBP13.1□□□□□ -0.31
PTPRN-202ENST00000409251 TGFBIQ15582 683 aa13.1□□□□□ -0.31
PTPRN-202ENST00000409251 SLC27A1Q6PCB7 646 aa13.1□□□□□ -0.31
PTPRN-202ENST00000409251 USP33Q8TEY7 942 aa13.1□□□□□ -0.31
PTPRN-202ENST00000409251 EFHD1Q9BUP0 239 aa13.1□□□□□ -0.31
PTPRN-202ENST00000409251 NT5C1AQ9BXI3 368 aa13.1□□□□□ -0.31
PTPRN-202ENST00000409251 CLK4Q9HAZ1 481 aaKnown RBP13.1□□□□□ -0.31
PTPRN-202ENST00000409251 KLHL8Q9P2G9 620 aaPredicted RBP13.1□□□□□ -0.31
PTPRN-202ENST00000409251 SNNO75324 88 aaPredicted RBP13.1□□□□□ -0.31
PTPRN-202ENST00000409251 PCNAP12004 261 aa13.1□□□□□ -0.31
PTPRN-202ENST00000409251 DARSP14868 501 aaKnown RBP13.1□□□□□ -0.31
PTPRN-202ENST00000409251 CES1P23141 567 aa13.1□□□□□ -0.31
PTPRN-202ENST00000409251 DPP6P42658 865 aa13.1□□□□□ -0.31
PTPRN-202ENST00000409251 CD97P48960 835 aa13.1□□□□□ -0.31
PTPRN-202ENST00000409251 SLC25A11Q02978 314 aaKnown RBP13.1□□□□□ -0.31
PTPRN-202ENST00000409251 PIGFQ07326 219 aa13.1□□□□□ -0.31
PTPRN-202ENST00000409251 RGS21Q2M5E4 152 aa13.1□□□□□ -0.31
PTPRN-202ENST00000409251 FAM131BQ86XD5 332 aa13.1□□□□□ -0.31
PTPRN-202ENST00000409251 PQLC3Q8N755 202 aa13.1□□□□□ -0.31
PTPRN-202ENST00000409251 PLD5Q8N7P1 536 aa13.1□□□□□ -0.31
PTPRN-202ENST00000409251 CANT1Q8WVQ1 401 aa13.1□□□□□ -0.31
PTPRN-202ENST00000409251 TAMM41Q96BW9 452 aa13.1□□□□□ -0.31
PTPRN-202ENST00000409251 SPATA17Q96L03 361 aa13.1□□□□□ -0.31
PTPRN-202ENST00000409251 SORT1Q99523 831 aa13.1□□□□□ -0.31
PTPRN-202ENST00000409251 CDH19Q9H159 772 aa13.1□□□□□ -0.31
PTPRN-202ENST00000409251 NUDT5Q9UKK9 219 aa13.1□□□□□ -0.31
PTPRN-202ENST00000409251 EMCNQ9ULC0 261 aa13.1□□□□□ -0.31
PTPRN-202ENST00000409251 SMIM28A0A1B0GU29 152 aa13.09□□□□□ -0.31
PTPRN-202ENST00000409251 KLF11O14901 512 aa13.09□□□□□ -0.31
PTPRN-202ENST00000409251 CD52P31358 61 aa13.09□□□□□ -0.31
PTPRN-202ENST00000409251 CDK9P50750 372 aaKnown RBP13.09□□□□□ -0.31
PTPRN-202ENST00000409251 RAD23AP54725 363 aa13.09□□□□□ -0.31
PTPRN-202ENST00000409251 PSME3P61289 254 aa13.09□□□□□ -0.31
PTPRN-202ENST00000409251 KCNJ11Q14654 390 aa13.09□□□□□ -0.31
PTPRN-202ENST00000409251 FBXO48Q5FWF7 155 aa13.09□□□□□ -0.31
PTPRN-202ENST00000409251 GDF6Q6KF10 455 aaPredicted RBP13.09□□□□□ -0.31
PTPRN-202ENST00000409251 PGM2L1Q6PCE3 622 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms