RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 C2CD6Q53TS8 623 aa13.04□□□□□ -0.32
SNORD88B-201ENST00000408454 ERMARDQ5T6L9 678 aa13.04□□□□□ -0.32
SNORD88B-201ENST00000408454 DHRS13Q6UX07 377 aa13.04□□□□□ -0.32
SNORD88B-201ENST00000408454 LAYNQ6UX15 382 aa13.04□□□□□ -0.32
SNORD88B-201ENST00000408454 LRRC49Q8IUZ0 686 aa13.04□□□□□ -0.32
SNORD88B-201ENST00000408454 FSTL5Q8N475 847 aaPredicted RBP13.04□□□□□ -0.32
SNORD88B-201ENST00000408454 FAM181AQ8N9Y4 354 aa13.04□□□□□ -0.32
SNORD88B-201ENST00000408454 ARRDC3Q96B67 414 aa13.04□□□□□ -0.32
SNORD88B-201ENST00000408454 C1QTNF2Q9BXJ5 285 aa13.04□□□□□ -0.32
SNORD88B-201ENST00000408454 SP110Q9HB58 689 aa13.04□□□□□ -0.32
SNORD88B-201ENST00000408454 RTN4Q9NQC3 1192 aaKnown RBP13.04□□□□□ -0.32
SNORD88B-201ENST00000408454 AIPL1Q9NZN9 384 aa13.04□□□□□ -0.32
SNORD88B-201ENST00000408454 ZNF212Q9UDV6 495 aa13.04□□□□□ -0.32
SNORD88B-201ENST00000408454 SALL4Q9UJQ4 1053 aa13.04□□□□□ -0.32
SNORD88B-201ENST00000408454 FZD10Q9ULW2 581 aa13.04□□□□□ -0.32
SNORD88B-201ENST00000408454 AP4E1Q9UPM8 1137 aa13.04□□□□□ -0.32
SNORD88B-201ENST00000408454 DOLKQ9UPQ8 538 aa13.04□□□□□ -0.32
SNORD88B-201ENST00000408454 FCF1Q9Y324 198 aaKnown RBP13.04□□□□□ -0.32
SNORD88B-201ENST00000408454 AK5Q9Y6K8 562 aa13.04□□□□□ -0.32
SNORD88B-201ENST00000408454 EPG5Q9HCE0 2579 aa13.04□□□□□ -0.32
SNORD88B-201ENST00000408454 SPTY2D1-AS1A0A0U1RR47 76 aa13.03□□□□□ -0.32
SNORD88B-201ENST00000408454 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.03□□□□□ -0.32
SNORD88B-201ENST00000408454 RASA4BC9J798 803 aa13.03□□□□□ -0.32
SNORD88B-201ENST00000408454 TMX2-CTNND1H3BSU7 103 aa13.03□□□□□ -0.32
SNORD88B-201ENST00000408454 KCNK3O14649 394 aa13.03□□□□□ -0.32
SNORD88B-201ENST00000408454 SCAMP1O15126 338 aa13.03□□□□□ -0.32
SNORD88B-201ENST00000408454 CCP110O43303 1012 aa13.03□□□□□ -0.32
SNORD88B-201ENST00000408454 RASA4O43374 803 aa13.03□□□□□ -0.32
SNORD88B-201ENST00000408454 PIAS2O75928 621 aa13.03□□□□□ -0.32
SNORD88B-201ENST00000408454 CSF2P04141 144 aa13.03□□□□□ -0.32
SNORD88B-201ENST00000408454 UGT2B4P06133 528 aa13.03□□□□□ -0.32
SNORD88B-201ENST00000408454 CTSLP07711 333 aa13.03□□□□□ -0.32
SNORD88B-201ENST00000408454 NME1P15531 152 aaKnown RBP13.03□□□□□ -0.32
SNORD88B-201ENST00000408454 PRLRP16471 622 aa13.03□□□□□ -0.32
SNORD88B-201ENST00000408454 CA4P22748 312 aa13.03□□□□□ -0.32
SNORD88B-201ENST00000408454 DGKAP23743 735 aa13.03□□□□□ -0.32
SNORD88B-201ENST00000408454 PRKCIP41743 596 aa13.03□□□□□ -0.32
SNORD88B-201ENST00000408454 CSNK1DP48730 415 aa13.03□□□□□ -0.32
SNORD88B-201ENST00000408454 TAS2R38P59533 333 aa13.03□□□□□ -0.32
SNORD88B-201ENST00000408454 PTP4A2Q12974 167 aa13.03□□□□□ -0.32
SNORD88B-201ENST00000408454 SERINC3Q13530 473 aa13.03□□□□□ -0.32
SNORD88B-201ENST00000408454 PIGHQ14442 188 aaPredicted RBP13.03□□□□□ -0.32
SNORD88B-201ENST00000408454 ELOCQ15369 112 aa13.03□□□□□ -0.32
SNORD88B-201ENST00000408454 TDRD12Q587J7 1177 aaKnown RBP13.03□□□□□ -0.32
SNORD88B-201ENST00000408454 RALGPS1Q5JS13 557 aa13.03□□□□□ -0.32
SNORD88B-201ENST00000408454 ESRP1Q6NXG1 681 aaKnown RBP13.03□□□□□ -0.32
SNORD88B-201ENST00000408454 Q6ZSR6 202 aa13.03□□□□□ -0.32
SNORD88B-201ENST00000408454 PARS2Q7L3T8 475 aaKnown RBP13.03□□□□□ -0.32
SNORD88B-201ENST00000408454 CHST14Q8NCH0 376 aa13.03□□□□□ -0.32
SNORD88B-201ENST00000408454 JOSD2Q8TAC2 188 aa13.03□□□□□ -0.32
SNORD88B-201ENST00000408454 RFFLQ8WZ73 363 aa13.03□□□□□ -0.32
SNORD88B-201ENST00000408454 TSC1Q92574 1164 aa13.03□□□□□ -0.32
SNORD88B-201ENST00000408454 SYN2Q92777 582 aaPredicted RBP13.03□□□□□ -0.32
SNORD88B-201ENST00000408454 CCDC97Q96F63 343 aaPredicted RBP13.03□□□□□ -0.32
SNORD88B-201ENST00000408454 ZNF599Q96NL3 588 aa13.03□□□□□ -0.32
SNORD88B-201ENST00000408454 CINPQ9BW66 212 aaPredicted RBP13.03□□□□□ -0.32
SNORD88B-201ENST00000408454 DHX35Q9H5Z1 703 aaKnown RBP13.03□□□□□ -0.32
SNORD88B-201ENST00000408454 EBF2Q9HAK2 575 aa13.03□□□□□ -0.32
SNORD88B-201ENST00000408454 TOR4AQ9NXH8 423 aa13.03□□□□□ -0.32
SNORD88B-201ENST00000408454 LHX6Q9UPM6 363 aa13.03□□□□□ -0.32
SNORD88B-201ENST00000408454 TRABD2BA6NFA1 517 aa13.02□□□□□ -0.33
SNORD88B-201ENST00000408454 CAPN8A6NHC0 703 aa13.02□□□□□ -0.33
SNORD88B-201ENST00000408454 TOP3BO95985 862 aaKnown RBP13.02□□□□□ -0.33
SNORD88B-201ENST00000408454 PAK4O96013 591 aaPredicted RBP13.02□□□□□ -0.33
SNORD88B-201ENST00000408454 CKMT1AP12532 417 aa13.02□□□□□ -0.33
SNORD88B-201ENST00000408454 GLDCP23378 1020 aa13.02□□□□□ -0.33
SNORD88B-201ENST00000408454 PCK1P35558 622 aa13.02□□□□□ -0.33
SNORD88B-201ENST00000408454 MLLT3P42568 568 aaPredicted RBP13.02□□□□□ -0.33
SNORD88B-201ENST00000408454 KLK7P49862 253 aa13.02□□□□□ -0.33
SNORD88B-201ENST00000408454 UCNP55089 124 aa13.02□□□□□ -0.33
SNORD88B-201ENST00000408454 AP1S1P61966 158 aa13.02□□□□□ -0.33
SNORD88B-201ENST00000408454 NSUN2Q08J23 767 aaKnown RBP eCLIP13.02□□□□□ -0.33
SNORD88B-201ENST00000408454 HADHQ16836 314 aaKnown RBP13.02□□□□□ -0.33
SNORD88B-201ENST00000408454 HES3Q5TGS1 186 aa13.02□□□□□ -0.33
SNORD88B-201ENST00000408454 PLEKHA7Q6IQ23 1121 aa13.02□□□□□ -0.33
SNORD88B-201ENST00000408454 LVRNQ6Q4G3 990 aa13.02□□□□□ -0.33
SNORD88B-201ENST00000408454 CCDC185Q8N715 623 aa13.02□□□□□ -0.33
SNORD88B-201ENST00000408454 OR13H1Q8NG92 308 aa13.02□□□□□ -0.33
SNORD88B-201ENST00000408454 KLHL32Q96NJ5 620 aa13.02□□□□□ -0.33
SNORD88B-201ENST00000408454 ANLNQ9NQW6 1124 aa13.02□□□□□ -0.33
SNORD88B-201ENST00000408454 SEPT3Q9UH03 358 aa13.02□□□□□ -0.33
SNORD88B-201ENST00000408454 DNPEPQ9ULA0 475 aa13.02□□□□□ -0.33
SNORD88B-201ENST00000408454 A0A1W2PQJ5 194 aa13.01□□□□□ -0.33
SNORD88B-201ENST00000408454 LRRC53A6NM62 1247 aa13.01□□□□□ -0.33
SNORD88B-201ENST00000408454 I6L893 689 aaPredicted RBP13.01□□□□□ -0.33
SNORD88B-201ENST00000408454 AQP9O43315 295 aa13.01□□□□□ -0.33
SNORD88B-201ENST00000408454 TCEA3O75764 348 aa13.01□□□□□ -0.33
SNORD88B-201ENST00000408454 PALMO75781 387 aa13.01□□□□□ -0.33
SNORD88B-201ENST00000408454 NEBLO76041 1014 aa13.01□□□□□ -0.33
SNORD88B-201ENST00000408454 ANXA6P08133 673 aa13.01□□□□□ -0.33
SNORD88B-201ENST00000408454 CTSEP14091 401 aa13.01□□□□□ -0.33
SNORD88B-201ENST00000408454 ACVRL1P37023 503 aa13.01□□□□□ -0.33
SNORD88B-201ENST00000408454 ABCG1P45844 678 aa13.01□□□□□ -0.33
SNORD88B-201ENST00000408454 BCL2L1Q07817 233 aa13.01□□□□□ -0.33
SNORD88B-201ENST00000408454 IL10RBQ08334 325 aa13.01□□□□□ -0.33
SNORD88B-201ENST00000408454 MAMLD1Q13495 774 aa13.01□□□□□ -0.33
SNORD88B-201ENST00000408454 PDE1CQ14123 709 aaPredicted RBP13.01□□□□□ -0.33
SNORD88B-201ENST00000408454 ZNF235Q14590 738 aa13.01□□□□□ -0.33
SNORD88B-201ENST00000408454 RTP5Q14D33 572 aa13.01□□□□□ -0.33
SNORD88B-201ENST00000408454 LRRC14Q15048 493 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms