RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 DKK1O94907 266 aa9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 CD160O95971 181 aa9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 SERPING1P05155 500 aa9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 TPM1P09493 284 aa9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 SERPINB6P35237 376 aa9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 HCAR3P49019 387 aa9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 RENBPP51606 427 aa9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 HNRNPKP61978 463 aaKnown RBP eCLIP9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 TRIM14Q14142 442 aa9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 PTK2BQ14289 1009 aa9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 PIGHQ14442 188 aaPredicted RBP9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 RAB6CQ53S08 254 aa9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 BOLA3Q53S33 107 aa9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 KCNT1Q5JUK3 1230 aa9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 ARTNQ5T4W7 220 aa9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 ERAP2Q6P179 960 aa9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 BRAT1Q6PJG6 821 aa9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 CCNI2Q6ZMN8 369 aaPredicted RBP9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 RFX8Q6ZV50 586 aa9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 SLCO6A1Q86UG4 719 aa9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 PARGQ86W56 976 aa9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 TMPRSS12Q86WS5 348 aa9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 GATAD2AQ86YP4 633 aa9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 PYROXD2Q8N2H3 581 aa9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 BBS5Q8N3I7 341 aa9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 PAF1Q8N7H5 531 aa9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 ATL2Q8NHH9 583 aa9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 CXorf40AQ8TE69 158 aa9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 HMCESQ96FZ2 354 aa9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 ZNF641Q96N77 438 aaPredicted RBP9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 LENG8Q96PV6 779 aaPredicted RBP9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 TUBGCP5Q96RT8 1024 aa9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 SNRNP25Q9BV90 132 aaKnown RBP9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 DUSP23Q9BVJ7 150 aa9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 CINPQ9BW66 212 aaPredicted RBP9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 TMEM121BQ9BXQ6 578 aaPredicted RBP9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 CPEB1Q9BZB8 566 aaKnown RBP9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 RAB6CQ9H0N0 254 aa9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 ISCUQ9H1K1 167 aa9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 ATP13A3Q9H7F0 1226 aa9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 USP29Q9HBJ7 922 aa9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 CBX8Q9HC52 389 aa9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 HAUS2Q9NVX0 235 aa9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 TAS2R14Q9NYV8 317 aa9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 IP6K2Q9UHH9 426 aa9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 LUC7L2Q9Y383 392 aaKnown RBP9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 KMT2BQ9UMN6 2715 aaPredicted RBP9.21□□□□□ -0.94
SNORD88A-201ENST00000408314 DDX3XO00571 662 aaKnown RBP eCLIP9.2□□□□□ -0.94
SNORD88A-201ENST00000408314 WNT9AO14904 365 aa9.2□□□□□ -0.94
SNORD88A-201ENST00000408314 ATMINO43313 823 aaPredicted RBP9.2□□□□□ -0.94
SNORD88A-201ENST00000408314 PRAMEF11O60813 436 aa9.2□□□□□ -0.94
SNORD88A-201ENST00000408314 TM7SF2O76062 418 aa9.2□□□□□ -0.94
SNORD88A-201ENST00000408314 TOP3BO95985 862 aaKnown RBP9.2□□□□□ -0.94
SNORD88A-201ENST00000408314 CKMT2P17540 419 aa9.2□□□□□ -0.94
SNORD88A-201ENST00000408314 SERPINA4P29622 427 aa9.2□□□□□ -0.94
SNORD88A-201ENST00000408314 MIPP30301 263 aa9.2□□□□□ -0.94
SNORD88A-201ENST00000408314 HSPA9P38646 679 aaKnown RBP9.2□□□□□ -0.94
SNORD88A-201ENST00000408314 CSNK1DP48730 415 aa9.2□□□□□ -0.94
SNORD88A-201ENST00000408314 DUSP3P51452 185 aaPredicted RBP9.2□□□□□ -0.94
SNORD88A-201ENST00000408314 THOP1P52888 689 aa9.2□□□□□ -0.94
SNORD88A-201ENST00000408314 YPEL5P62699 121 aa9.2□□□□□ -0.94
SNORD88A-201ENST00000408314 DAB2P98082 770 aa9.2□□□□□ -0.94
SNORD88A-201ENST00000408314 E2F1Q01094 437 aa9.2□□□□□ -0.94
SNORD88A-201ENST00000408314 OGDHQ02218 1023 aa9.2□□□□□ -0.94
SNORD88A-201ENST00000408314 ZNF211Q13398 564 aaPredicted RBP9.2□□□□□ -0.94
SNORD88A-201ENST00000408314 SMAD1Q15797 465 aaKnown RBP9.2□□□□□ -0.94
SNORD88A-201ENST00000408314 CCDC157Q569K6 752 aa9.2□□□□□ -0.94
SNORD88A-201ENST00000408314 PPP6R3Q5H9R7 873 aaPredicted RBP9.2□□□□□ -0.94
SNORD88A-201ENST00000408314 SEL1L3Q68CR1 1132 aa9.2□□□□□ -0.94
SNORD88A-201ENST00000408314 GCNT7Q6ZNI0 430 aa9.2□□□□□ -0.94
SNORD88A-201ENST00000408314 TTC7BQ86TV6 843 aa9.2□□□□□ -0.94
SNORD88A-201ENST00000408314 LUZP1Q86V48 1076 aa9.2□□□□□ -0.94
SNORD88A-201ENST00000408314 SPATS2Q86XZ4 545 aaKnown RBP9.2□□□□□ -0.94
SNORD88A-201ENST00000408314 EID2Q8N6I1 236 aa9.2□□□□□ -0.94
SNORD88A-201ENST00000408314 PNPLA1Q8N8W4 532 aa9.2□□□□□ -0.94
SNORD88A-201ENST00000408314 OR13H1Q8NG92 308 aa9.2□□□□□ -0.94
SNORD88A-201ENST00000408314 OR6K2Q8NGY2 324 aa9.2□□□□□ -0.94
SNORD88A-201ENST00000408314 NSMCE1Q8WV22 266 aa9.2□□□□□ -0.94
SNORD88A-201ENST00000408314 BTN2A2Q8WVV5 523 aa9.2□□□□□ -0.94
SNORD88A-201ENST00000408314 TEKT4Q8WW24 435 aa9.2□□□□□ -0.94
SNORD88A-201ENST00000408314 KLHL32Q96NJ5 620 aa9.2□□□□□ -0.94
SNORD88A-201ENST00000408314 ZNF599Q96NL3 588 aa9.2□□□□□ -0.94
SNORD88A-201ENST00000408314 NAP1L5Q96NT1 182 aaPredicted RBP9.2□□□□□ -0.94
SNORD88A-201ENST00000408314 MYOCQ99972 504 aa9.2□□□□□ -0.94
SNORD88A-201ENST00000408314 C1QTNF2Q9BXJ5 285 aa9.2□□□□□ -0.94
SNORD88A-201ENST00000408314 CCDC86Q9H6F5 360 aaKnown RBP9.2□□□□□ -0.94
SNORD88A-201ENST00000408314 LRRC19Q9H756 370 aa9.2□□□□□ -0.94
SNORD88A-201ENST00000408314 ZNHIT6Q9NWK9 470 aaKnown RBP9.2□□□□□ -0.94
SNORD88A-201ENST00000408314 TOR4AQ9NXH8 423 aa9.2□□□□□ -0.94
SNORD88A-201ENST00000408314 MYO1AQ9UBC5 1043 aa9.2□□□□□ -0.94
SNORD88A-201ENST00000408314 PCSK1NQ9UHG2 260 aa9.2□□□□□ -0.94
SNORD88A-201ENST00000408314 ZMIZ1Q9ULJ6 1067 aa9.2□□□□□ -0.94
SNORD88A-201ENST00000408314 CAPN11Q9UMQ6 739 aa9.2□□□□□ -0.94
SNORD88A-201ENST00000408314 ZFR2Q9UPR6 939 aaKnown RBP9.2□□□□□ -0.94
SNORD88A-201ENST00000408314 TRPM6Q9BX84 2022 aa9.19□□□□□ -0.94
SNORD88A-201ENST00000408314 SPTY2D1-AS1A0A0U1RR47 76 aa9.19□□□□□ -0.94
SNORD88A-201ENST00000408314 TSPAN11A1L157 253 aa9.19□□□□□ -0.94
SNORD88A-201ENST00000408314 TMEM110-MUSTN1A8MSY1 372 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms