RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 PAPLNO95428 1278 aa13.11□□□□□ -0.31
SMARCB1-203ENST00000407082 CCNB1P14635 433 aa13.11□□□□□ -0.31
SMARCB1-203ENST00000407082 HOXB3P14651 431 aaPredicted RBP13.11□□□□□ -0.31
SMARCB1-203ENST00000407082 ATF6P18850 670 aa13.11□□□□□ -0.31
SMARCB1-203ENST00000407082 ADRA1DP25100 572 aa13.11□□□□□ -0.31
SMARCB1-203ENST00000407082 CRHR1P34998 444 aa13.11□□□□□ -0.31
SMARCB1-203ENST00000407082 HADHAP40939 763 aa13.11□□□□□ -0.31
SMARCB1-203ENST00000407082 CXCR3P49682 368 aa13.11□□□□□ -0.31
SMARCB1-203ENST00000407082 NCALDP61601 193 aa13.11□□□□□ -0.31
SMARCB1-203ENST00000407082 ELF3P78545 371 aaPredicted RBP13.11□□□□□ -0.31
SMARCB1-203ENST00000407082 PPIDQ08752 370 aaKnown RBP13.11□□□□□ -0.31
SMARCB1-203ENST00000407082 MGAT5Q09328 741 aa13.11□□□□□ -0.31
SMARCB1-203ENST00000407082 SRSF5Q13243 272 aaKnown RBP13.11□□□□□ -0.31
SMARCB1-203ENST00000407082 FZD5Q13467 585 aa13.11□□□□□ -0.31
SMARCB1-203ENST00000407082 VEPH1Q14D04 833 aa13.11□□□□□ -0.31
SMARCB1-203ENST00000407082 TAF12Q16514 161 aa13.11□□□□□ -0.31
SMARCB1-203ENST00000407082 AASDHQ4L235 1098 aaPredicted RBP13.11□□□□□ -0.31
SMARCB1-203ENST00000407082 PABPC1LQ4VXU2 614 aaKnown RBP13.11□□□□□ -0.31
SMARCB1-203ENST00000407082 FAXCQ5TGI0 409 aa13.11□□□□□ -0.31
SMARCB1-203ENST00000407082 DENND5BQ6ZUT9 1274 aa13.11□□□□□ -0.31
SMARCB1-203ENST00000407082 LINC00523Q86TU6 105 aa13.11□□□□□ -0.31
SMARCB1-203ENST00000407082 LRRC49Q8IUZ0 686 aa13.11□□□□□ -0.31
SMARCB1-203ENST00000407082 NPAS3Q8IXF0 933 aa13.11□□□□□ -0.31
SMARCB1-203ENST00000407082 RNF34Q969K3 372 aa13.11□□□□□ -0.31
SMARCB1-203ENST00000407082 HDAC11Q96DB2 347 aa13.11□□□□□ -0.31
SMARCB1-203ENST00000407082 C8orf48Q96LL4 319 aa13.11□□□□□ -0.31
SMARCB1-203ENST00000407082 ZNF512Q96ME7 567 aaPredicted RBP13.11□□□□□ -0.31
SMARCB1-203ENST00000407082 TMEM237Q96Q45 408 aa13.11□□□□□ -0.31
SMARCB1-203ENST00000407082 SRPK1Q96SB4 655 aaKnown RBP13.11□□□□□ -0.31
SMARCB1-203ENST00000407082 SMOQ99835 787 aa13.11□□□□□ -0.31
SMARCB1-203ENST00000407082 LMAN1LQ9HAT1 526 aa13.11□□□□□ -0.31
SMARCB1-203ENST00000407082 ABCC13Q9NSE7 274 aa13.11□□□□□ -0.31
SMARCB1-203ENST00000407082 DDIT4Q9NX09 232 aa13.11□□□□□ -0.31
SMARCB1-203ENST00000407082 MOCS1Q9NZB8 636 aa13.11□□□□□ -0.31
SMARCB1-203ENST00000407082 KLHL8Q9P2G9 620 aaPredicted RBP13.11□□□□□ -0.31
SMARCB1-203ENST00000407082 RPL26L1Q9UNX3 145 aaKnown RBP13.11□□□□□ -0.31
SMARCB1-203ENST00000407082 PLLPQ9Y342 182 aa13.11□□□□□ -0.31
SMARCB1-203ENST00000407082 ASB3Q9Y575 518 aa13.11□□□□□ -0.31
SMARCB1-203ENST00000407082 RALGAPA1Q6GYQ0 2036 aa13.1□□□□□ -0.31
SMARCB1-203ENST00000407082 SYNJ2BP-COX16A0A087WUM0 186 aa13.1□□□□□ -0.31
SMARCB1-203ENST00000407082 CHURC1-FNTBB4DL54 471 aa13.1□□□□□ -0.31
SMARCB1-203ENST00000407082 GLRA3O75311 464 aa13.1□□□□□ -0.31
SMARCB1-203ENST00000407082 AVILO75366 819 aa13.1□□□□□ -0.31
SMARCB1-203ENST00000407082 ERCC2P18074 760 aa13.1□□□□□ -0.31
SMARCB1-203ENST00000407082 ETV4P43268 484 aa13.1□□□□□ -0.31
SMARCB1-203ENST00000407082 FNTBP49356 437 aa13.1□□□□□ -0.31
SMARCB1-203ENST00000407082 CCR3P51677 355 aa13.1□□□□□ -0.31
SMARCB1-203ENST00000407082 ARFIP2P53365 341 aa13.1□□□□□ -0.31
SMARCB1-203ENST00000407082 GRM2Q14416 872 aa13.1□□□□□ -0.31
SMARCB1-203ENST00000407082 ACBD5Q5T8D3 534 aaPredicted RBP13.1□□□□□ -0.31
SMARCB1-203ENST00000407082 GRTP1Q5TC63 336 aa13.1□□□□□ -0.31
SMARCB1-203ENST00000407082 CGB2Q6NT52 195 aa13.1□□□□□ -0.31
SMARCB1-203ENST00000407082 SH2D5Q6ZV89 423 aa13.1□□□□□ -0.31
SMARCB1-203ENST00000407082 CEP68Q76N32 757 aa13.1□□□□□ -0.31
SMARCB1-203ENST00000407082 OTOAQ7RTW8 1153 aa13.1□□□□□ -0.31
SMARCB1-203ENST00000407082 DNAJB7Q7Z6W7 309 aaPredicted RBP13.1□□□□□ -0.31
SMARCB1-203ENST00000407082 ITIH5Q86UX2 942 aa13.1□□□□□ -0.31
SMARCB1-203ENST00000407082 ARHGAP18Q8N392 663 aa13.1□□□□□ -0.31
SMARCB1-203ENST00000407082 FITM2Q8N6M3 262 aa13.1□□□□□ -0.31
SMARCB1-203ENST00000407082 ZMIZ2Q8NF64 920 aa13.1□□□□□ -0.31
SMARCB1-203ENST00000407082 GABPB2Q8TAK5 448 aaPredicted RBP13.1□□□□□ -0.31
SMARCB1-203ENST00000407082 C10orf82Q8WW14 230 aa13.1□□□□□ -0.31
SMARCB1-203ENST00000407082 PSMG2Q969U7 264 aa13.1□□□□□ -0.31
SMARCB1-203ENST00000407082 SERAC1Q96JX3 654 aa13.1□□□□□ -0.31
SMARCB1-203ENST00000407082 SPATA17Q96L03 361 aa13.1□□□□□ -0.31
SMARCB1-203ENST00000407082 CEP295NLQ96MC4 621 aa13.1□□□□□ -0.31
SMARCB1-203ENST00000407082 FAM111AQ96PZ2 611 aa13.1□□□□□ -0.31
SMARCB1-203ENST00000407082 HAPLN3Q96S86 360 aa13.1□□□□□ -0.31
SMARCB1-203ENST00000407082 TACO1Q9BSH4 297 aaKnown RBP13.1□□□□□ -0.31
SMARCB1-203ENST00000407082 CATSPERBQ9H7T0 1116 aa13.1□□□□□ -0.31
SMARCB1-203ENST00000407082 BRD9Q9H8M2 597 aa13.1□□□□□ -0.31
SMARCB1-203ENST00000407082 PIGVQ9NUD9 493 aa13.1□□□□□ -0.31
SMARCB1-203ENST00000407082 COX16Q9P0S2 106 aa13.1□□□□□ -0.31
SMARCB1-203ENST00000407082 SEPT10Q9P0V9 454 aa13.1□□□□□ -0.31
SMARCB1-203ENST00000407082 DNMT3BQ9UBC3 853 aaKnown RBP13.1□□□□□ -0.31
SMARCB1-203ENST00000407082 ZFP69BQ9UJL9 534 aa13.1□□□□□ -0.31
SMARCB1-203ENST00000407082 MID2Q9UJV3 735 aa13.1□□□□□ -0.31
SMARCB1-203ENST00000407082 PTPRDP23468 1912 aa13.09□□□□□ -0.31
SMARCB1-203ENST00000407082 YJEFN3A6XGL0 299 aa13.09□□□□□ -0.31
SMARCB1-203ENST00000407082 E7ENQ6 273 aa13.09□□□□□ -0.31
SMARCB1-203ENST00000407082 GOLGA8RI6L899 631 aa13.09□□□□□ -0.31
SMARCB1-203ENST00000407082 MAN2B1O00754 1011 aa13.09□□□□□ -0.31
SMARCB1-203ENST00000407082 FGF10O15520 208 aaPredicted RBP13.09□□□□□ -0.31
SMARCB1-203ENST00000407082 HRO43593 1189 aa13.09□□□□□ -0.31
SMARCB1-203ENST00000407082 ECI2O75521 394 aa13.09□□□□□ -0.31
SMARCB1-203ENST00000407082 AP2A1O95782 977 aa13.09□□□□□ -0.31
SMARCB1-203ENST00000407082 POU2F2P09086 479 aa13.09□□□□□ -0.31
SMARCB1-203ENST00000407082 USP17L7P0C7H9 530 aa13.09□□□□□ -0.31
SMARCB1-203ENST00000407082 CSH1P0DML2 217 aa13.09□□□□□ -0.31
SMARCB1-203ENST00000407082 CSH2P0DML3 217 aa13.09□□□□□ -0.31
SMARCB1-203ENST00000407082 EZRP15311 586 aaKnown RBP13.09□□□□□ -0.31
SMARCB1-203ENST00000407082 VAV1P15498 845 aa13.09□□□□□ -0.31
SMARCB1-203ENST00000407082 PTPN2P17706 415 aa13.09□□□□□ -0.31
SMARCB1-203ENST00000407082 SPRP35270 261 aaPredicted RBP13.09□□□□□ -0.31
SMARCB1-203ENST00000407082 CXCL12P48061 93 aa13.09□□□□□ -0.31
SMARCB1-203ENST00000407082 SERPINB4P48594 390 aa13.09□□□□□ -0.31
SMARCB1-203ENST00000407082 ZBTB16Q05516 673 aa13.09□□□□□ -0.31
SMARCB1-203ENST00000407082 ILF2Q12905 390 aaKnown RBP13.09□□□□□ -0.31
SMARCB1-203ENST00000407082 SEMA3BQ13214 749 aa13.09□□□□□ -0.31
SMARCB1-203ENST00000407082 MTA1Q13330 715 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms