RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 CXCL11O14625 94 aa12.15□□□□□ -0.46
SMCR8-201ENST00000406438 IL1R1P14778 569 aa12.15□□□□□ -0.46
SMCR8-201ENST00000406438 SLC6A2P23975 617 aa12.15□□□□□ -0.46
SMCR8-201ENST00000406438 GMFBP60983 142 aa12.15□□□□□ -0.46
SMCR8-201ENST00000406438 GCNT1Q02742 428 aa12.15□□□□□ -0.46
SMCR8-201ENST00000406438 TNK2Q07912 1038 aa12.15□□□□□ -0.46
SMCR8-201ENST00000406438 ITPK1Q13572 414 aa12.15□□□□□ -0.46
SMCR8-201ENST00000406438 RRP1BQ14684 758 aaKnown RBP12.15□□□□□ -0.46
SMCR8-201ENST00000406438 PARP6Q2NL67 630 aa12.15□□□□□ -0.46
SMCR8-201ENST00000406438 TSHZ1Q6ZSZ6 1077 aa12.15□□□□□ -0.46
SMCR8-201ENST00000406438 TEX47Q8TBZ9 253 aa12.15□□□□□ -0.46
SMCR8-201ENST00000406438 MAGEE2Q8TD90 523 aaPredicted RBP12.15□□□□□ -0.46
SMCR8-201ENST00000406438 FNIP1Q8TF40 1166 aa12.15□□□□□ -0.46
SMCR8-201ENST00000406438 MIR1-1HGQ9H1L0 117 aa12.15□□□□□ -0.46
SMCR8-201ENST00000406438 ALG9Q9H6U8 611 aa12.15□□□□□ -0.46
SMCR8-201ENST00000406438 OR12D3Q9UGF7 316 aa12.15□□□□□ -0.46
SMCR8-201ENST00000406438 KIF1AQ12756 1690 aa12.15□□□□□ -0.46
SMCR8-201ENST00000406438 NRCAMQ92823 1304 aa12.15□□□□□ -0.46
SMCR8-201ENST00000406438 APOC4-APOC2K7ER74 178 aa12.15□□□□□ -0.46
SMCR8-201ENST00000406438 APOC2P02655 101 aa12.15□□□□□ -0.46
SMCR8-201ENST00000406438 CBX5P45973 191 aa12.15□□□□□ -0.46
SMCR8-201ENST00000406438 NKAPQ8N5F7 415 aaKnown RBP12.15□□□□□ -0.46
SMCR8-201ENST00000406438 SEMA6AQ9H2E6 1030 aa12.15□□□□□ -0.46
SMCR8-201ENST00000406438 EPB41L1Q9H4G0 881 aa12.15□□□□□ -0.46
SMCR8-201ENST00000406438 CCNB1P14635 433 aa12.15□□□□□ -0.46
SMCR8-201ENST00000406438 MIPP30301 263 aa12.15□□□□□ -0.46
SMCR8-201ENST00000406438 CYP2C18P33260 490 aa12.15□□□□□ -0.46
SMCR8-201ENST00000406438 UGT2B15P54855 530 aa12.15□□□□□ -0.46
SMCR8-201ENST00000406438 CDH8P55286 799 aa12.15□□□□□ -0.46
SMCR8-201ENST00000406438 PALB2Q86YC2 1186 aa12.15□□□□□ -0.46
SMCR8-201ENST00000406438 ARHGEF19Q8IW93 802 aa12.15□□□□□ -0.46
SMCR8-201ENST00000406438 SEMA4AQ9H3S1 761 aa12.15□□□□□ -0.46
SMCR8-201ENST00000406438 PCDH12Q9NPG4 1184 aa12.15□□□□□ -0.46
SMCR8-201ENST00000406438 CKLFQ9UBR5 152 aa12.15□□□□□ -0.46
SMCR8-201ENST00000406438 SDK1Q7Z5N4 2213 aa12.15□□□□□ -0.46
SMCR8-201ENST00000406438 GAKO14976 1311 aa12.15□□□□□ -0.46
SMCR8-201ENST00000406438 ANKRD26Q9UPS8 1709 aa12.15□□□□□ -0.46
SMCR8-201ENST00000406438 MSCO60682 206 aa12.15□□□□□ -0.46
SMCR8-201ENST00000406438 LYNP07948 512 aa12.15□□□□□ -0.46
SMCR8-201ENST00000406438 TCF4P15884 667 aa12.15□□□□□ -0.46
SMCR8-201ENST00000406438 RPL21P46778 160 aaKnown RBP12.15□□□□□ -0.46
SMCR8-201ENST00000406438 OMPP47874 163 aa12.15□□□□□ -0.46
SMCR8-201ENST00000406438 RPL14P50914 215 aaKnown RBP12.15□□□□□ -0.46
SMCR8-201ENST00000406438 SRSF11Q05519 484 aaKnown RBP12.15□□□□□ -0.46
SMCR8-201ENST00000406438 SQLEQ14534 574 aa12.15□□□□□ -0.46
SMCR8-201ENST00000406438 STXBP5Q5T5C0 1151 aa12.15□□□□□ -0.46
SMCR8-201ENST00000406438 GCNT7Q6ZNI0 430 aa12.15□□□□□ -0.46
SMCR8-201ENST00000406438 AMER2Q8N7J2 671 aa12.15□□□□□ -0.46
SMCR8-201ENST00000406438 POP5Q969H6 163 aaKnown RBP12.15□□□□□ -0.46
SMCR8-201ENST00000406438 ZNF354BQ96LW1 612 aa12.15□□□□□ -0.46
SMCR8-201ENST00000406438 SEMA4BQ9NPR2 832 aaPredicted RBP12.15□□□□□ -0.46
SMCR8-201ENST00000406438 ACKR2O00590 384 aa12.15□□□□□ -0.47
SMCR8-201ENST00000406438 FCHO1O14526 889 aa12.15□□□□□ -0.47
SMCR8-201ENST00000406438 CLUP10909 449 aa12.15□□□□□ -0.47
SMCR8-201ENST00000406438 EIF4BP23588 611 aaKnown RBP12.15□□□□□ -0.47
SMCR8-201ENST00000406438 OFCC1Q8IZS5 231 aa12.15□□□□□ -0.47
SMCR8-201ENST00000406438 POU5F2Q8N7G0 328 aa12.15□□□□□ -0.47
SMCR8-201ENST00000406438 RASSF1Q9NS23 344 aa12.15□□□□□ -0.47
SMCR8-201ENST00000406438 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.15□□□□□ -0.472e-6■□□□□ 8.7
SMCR8-201ENST00000406438 BTBD7Q9P203 1132 aa12.15□□□□□ -0.47
SMCR8-201ENST00000406438 ARMCX1Q9P291 453 aa12.15□□□□□ -0.47
SMCR8-201ENST00000406438 CDH9Q9ULB4 789 aa12.15□□□□□ -0.47
SMCR8-201ENST00000406438 ITGA3P26006 1051 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 ACVR2BQ13705 512 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 XKR6Q5GH73 641 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 TRIM40Q6P9F5 258 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 ADGRG2Q8IZP9 1017 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 SLC5A5Q92911 643 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 QKIQ96PU8 341 aaKnown RBP eCLIP12.14□□□□□ -0.47
SMCR8-201ENST00000406438 FTHL17Q9BXU8 183 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 TRIP11Q15643 1979 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 SLC28A1O00337 649 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 ADCY6O43306 1168 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 NTRK1P04629 796 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 SNRPB2P08579 225 aaKnown RBP12.14□□□□□ -0.47
SMCR8-201ENST00000406438 LSM12Q3MHD2 195 aaKnown RBP12.14□□□□□ -0.47
SMCR8-201ENST00000406438 HECTD3Q5T447 861 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 AFTPHQ6ULP2 937 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 DSELQ8IZU8 1212 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 VPS35Q96QK1 796 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 ZYG11BQ9C0D3 744 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 MRTO4Q9UKD2 239 aaKnown RBP12.14□□□□□ -0.47
SMCR8-201ENST00000406438 C1orf167Q5SNV9 1468 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 GLI1P08151 1106 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 LTA4HP09960 611 aaKnown RBP12.14□□□□□ -0.47
SMCR8-201ENST00000406438 AP1S2P56377 157 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 SOX10P56693 466 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 ERVK-9P63128 1117 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 DCTN2Q13561 401 aaKnown RBP12.14□□□□□ -0.47
SMCR8-201ENST00000406438 POM121L1PQ3SYA9 428 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 IQSEC1Q6DN90 963 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 SNX32Q86XE0 403 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.14□□□□□ -0.47
SMCR8-201ENST00000406438 FBXO30Q8TB52 745 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 SPATA31A5Q5VU36 1347 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 SPATA31A7Q8IWB4 1347 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 SHROOM3Q8TF72 1996 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 A0A0B4J269 797 aa12.14□□□□□ -0.47
SMCR8-201ENST00000406438 ADSLP30566 484 aaPredicted RBP12.14□□□□□ -0.47
SMCR8-201ENST00000406438 CHKAP35790 457 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms