RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 KDELC1Q6UW63 502 aa21.27■■□□□ 1
TPM1-208ENST00000404484 UNC5AQ6ZN44 842 aa21.27■■□□□ 1
TPM1-208ENST00000404484 METTL3Q86U44 580 aaKnown RBP21.27■■□□□ 1
TPM1-208ENST00000404484 PRPF39Q86UA1 669 aaKnown RBP21.27■■□□□ 1
TPM1-208ENST00000404484 MPP5Q8N3R9 675 aa21.27■■□□□ 1
TPM1-208ENST00000404484 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.27■■□□□ 1
TPM1-208ENST00000404484 ACDQ96AP0 544 aa21.27■■□□□ 1
TPM1-208ENST00000404484 SYBUQ9NX95 663 aa21.27■■□□□ 1
TPM1-208ENST00000404484 NARSO43776 548 aaKnown RBP21.27■□□□□ 0.99
TPM1-208ENST00000404484 POLBP06746 335 aa21.27■□□□□ 0.99
TPM1-208ENST00000404484 MZF1P28698 734 aaPredicted RBP21.27■□□□□ 0.99
TPM1-208ENST00000404484 CD86P42081 329 aa21.27■□□□□ 0.99
TPM1-208ENST00000404484 MAXP61244 160 aa21.27■□□□□ 0.99
TPM1-208ENST00000404484 DSC2Q02487 901 aa21.27■□□□□ 0.99
TPM1-208ENST00000404484 SIGLEC14Q08ET2 396 aa21.27■□□□□ 0.99
TPM1-208ENST00000404484 NIPAL4Q0D2K0 466 aa21.27■□□□□ 0.99
TPM1-208ENST00000404484 NR1H3Q13133 447 aa21.27■□□□□ 0.99
TPM1-208ENST00000404484 TMEM31Q5JXX7 168 aa21.27■□□□□ 0.99
TPM1-208ENST00000404484 LEKR1Q6ZMV7 388 aa21.27■□□□□ 0.99
TPM1-208ENST00000404484 CNPY4Q8N129 248 aa21.27■□□□□ 0.99
TPM1-208ENST00000404484 PGBD5Q8N414 524 aa21.27■□□□□ 0.99
TPM1-208ENST00000404484 ARFGAP2Q8N6H7 521 aa21.27■□□□□ 0.99
TPM1-208ENST00000404484 ARRDC2Q8TBH0 407 aa21.27■□□□□ 0.99
TPM1-208ENST00000404484 IRF7Q92985 503 aa21.27■□□□□ 0.99
TPM1-208ENST00000404484 BHMTQ93088 406 aa21.27■□□□□ 0.99
TPM1-208ENST00000404484 TADA1Q96BN2 335 aa21.27■□□□□ 0.99
TPM1-208ENST00000404484 TLCD1Q96CP7 247 aa21.27■□□□□ 0.99
TPM1-208ENST00000404484 MRGPRX2Q96LB1 330 aa21.27■□□□□ 0.99
TPM1-208ENST00000404484 SEMA3CQ99985 751 aa21.27■□□□□ 0.99
TPM1-208ENST00000404484 PSMC3IPQ9P2W1 217 aaPredicted RBP21.27■□□□□ 0.99
TPM1-208ENST00000404484 NOVA2Q9UNW9 492 aaKnown RBP21.27■□□□□ 0.99
TPM1-208ENST00000404484 POC1B-GALNT4F8VUJ3 575 aa21.26■□□□□ 0.99
TPM1-208ENST00000404484 ZMPSTE24O75844 475 aa21.26■□□□□ 0.99
TPM1-208ENST00000404484 PENKP01210 267 aaPredicted RBP21.26■□□□□ 0.99
TPM1-208ENST00000404484 SERPINF2P08697 491 aa21.26■□□□□ 0.99
TPM1-208ENST00000404484 GLDCP23378 1020 aa21.26■□□□□ 0.99
TPM1-208ENST00000404484 CBX1P83916 185 aa21.26■□□□□ 0.99
TPM1-208ENST00000404484 FAM78AQ5JUQ0 283 aa21.26■□□□□ 0.99
TPM1-208ENST00000404484 SPANXN3Q5MJ09 141 aa21.26■□□□□ 0.99
TPM1-208ENST00000404484 ZNF449Q6P9G9 518 aa21.26■□□□□ 0.99
TPM1-208ENST00000404484 RANBP10Q6VN20 620 aa21.26■□□□□ 0.99
TPM1-208ENST00000404484 MTSS1LQ765P7 747 aa21.26■□□□□ 0.99
TPM1-208ENST00000404484 TAOK1Q7L7X3 1001 aa21.26■□□□□ 0.99
TPM1-208ENST00000404484 PTCD2Q8WV60 388 aaKnown RBP21.26■□□□□ 0.99
TPM1-208ENST00000404484 ALG14Q96F25 216 aa21.26■□□□□ 0.99
TPM1-208ENST00000404484 ASIC4Q96FT7 647 aa21.26■□□□□ 0.99
TPM1-208ENST00000404484 APOL2Q9BQE5 337 aa21.26■□□□□ 0.99
TPM1-208ENST00000404484 LRFN3Q9BTN0 628 aa21.26■□□□□ 0.99
TPM1-208ENST00000404484 SPHK2Q9NRA0 654 aa21.26■□□□□ 0.99
TPM1-208ENST00000404484 VPS51Q9UID3 782 aa21.26■□□□□ 0.99
TPM1-208ENST00000404484 IKBKGQ9Y6K9 419 aa21.26■□□□□ 0.99
TPM1-208ENST00000404484 ZDBF2Q9HCK1 2354 aa21.26■□□□□ 0.99
TPM1-208ENST00000404484 NR1D1P20393 614 aa21.25■□□□□ 0.99
TPM1-208ENST00000404484 PRKCHP24723 683 aa21.25■□□□□ 0.99
TPM1-208ENST00000404484 PLK1P53350 603 aa21.25■□□□□ 0.99
TPM1-208ENST00000404484 ARF5P84085 180 aa21.25■□□□□ 0.99
TPM1-208ENST00000404484 SKOR1P84550 965 aa21.25■□□□□ 0.99
TPM1-208ENST00000404484 FRG1Q14331 258 aaKnown RBP21.25■□□□□ 0.99
TPM1-208ENST00000404484 TNFAIP8L3Q5GJ75 292 aa21.25■□□□□ 0.99
TPM1-208ENST00000404484 TANGO2Q6ICL3 276 aa21.25■□□□□ 0.99
TPM1-208ENST00000404484 SH2D3CQ8N5H7 860 aa21.25■□□□□ 0.99
TPM1-208ENST00000404484 RIN3Q8TB24 985 aa21.25■□□□□ 0.99
TPM1-208ENST00000404484 WFDC5Q8TCV5 224 aa21.25■□□□□ 0.99
TPM1-208ENST00000404484 ASB16Q96NS5 453 aa21.25■□□□□ 0.99
TPM1-208ENST00000404484 KXD1Q9BQD3 176 aa21.25■□□□□ 0.99
TPM1-208ENST00000404484 BBS2Q9BXC9 721 aa21.25■□□□□ 0.99
TPM1-208ENST00000404484 ARNT2Q9HBZ2 717 aa21.25■□□□□ 0.99
TPM1-208ENST00000404484 PIH1D1Q9NWS0 290 aaKnown RBP21.25■□□□□ 0.99
TPM1-208ENST00000404484 MARK1Q9P0L2 795 aa21.25■□□□□ 0.99
TPM1-208ENST00000404484 DUSP12Q9UNI6 340 aa21.25■□□□□ 0.99
TPM1-208ENST00000404484 FAM237BA0A1B0GVD1 139 aa21.24■□□□□ 0.99
TPM1-208ENST00000404484 TMEM221A6NGB7 291 aa21.24■□□□□ 0.99
TPM1-208ENST00000404484 M0R296 226 aa21.24■□□□□ 0.99
TPM1-208ENST00000404484 TMCC1O94876 653 aa21.24■□□□□ 0.99
TPM1-208ENST00000404484 EPOP01588 193 aa21.24■□□□□ 0.99
TPM1-208ENST00000404484 MMP2P08253 660 aa21.24■□□□□ 0.99
TPM1-208ENST00000404484 MSH2P43246 934 aa21.24■□□□□ 0.99
TPM1-208ENST00000404484 MAGOHP61326 146 aaKnown RBP21.24■□□□□ 0.99
TPM1-208ENST00000404484 SLC20A2Q08357 652 aa21.24■□□□□ 0.99
TPM1-208ENST00000404484 LMAN2Q12907 356 aa21.24■□□□□ 0.99
TPM1-208ENST00000404484 OLIG2Q13516 323 aa21.24■□□□□ 0.99
TPM1-208ENST00000404484 CRYMQ14894 314 aa21.24■□□□□ 0.99
TPM1-208ENST00000404484 PCSK7Q16549 785 aa21.24■□□□□ 0.99
TPM1-208ENST00000404484 RALGPS1Q5JS13 557 aa21.24■□□□□ 0.99
TPM1-208ENST00000404484 TMEM25Q86YD3 366 aa21.24■□□□□ 0.99
TPM1-208ENST00000404484 CDKL2Q92772 493 aa21.24■□□□□ 0.99
TPM1-208ENST00000404484 SMARCD2Q92925 531 aa21.24■□□□□ 0.99
TPM1-208ENST00000404484 TTC17Q96AE7 1141 aa21.24■□□□□ 0.99
TPM1-208ENST00000404484 FEM1CQ96JP0 617 aa21.24■□□□□ 0.99
TPM1-208ENST00000404484 SLC2A11Q9BYW1 496 aa21.24■□□□□ 0.99
TPM1-208ENST00000404484 PLA2G2FQ9BZM2 168 aa21.24■□□□□ 0.99
TPM1-208ENST00000404484 OBP2AQ9NY56 170 aa21.24■□□□□ 0.99
TPM1-208ENST00000404484 PLK2Q9NYY3 685 aa21.24■□□□□ 0.99
TPM1-208ENST00000404484 SNAP91O60641 907 aa21.23■□□□□ 0.99
TPM1-208ENST00000404484 USP1O94782 785 aa21.23■□□□□ 0.99
TPM1-208ENST00000404484 FCARP24071 287 aa21.23■□□□□ 0.99
TPM1-208ENST00000404484 CRADDP78560 199 aa21.23■□□□□ 0.99
TPM1-208ENST00000404484 NAB1Q13506 487 aa21.23■□□□□ 0.99
TPM1-208ENST00000404484 CYTH1Q15438 398 aa21.23■□□□□ 0.99
TPM1-208ENST00000404484 PLEKHG6Q3KR16 790 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms