RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 CAMK1DQ8IU85 385 aa17.4■□□□□ 0.38
PTCHD3P3-201ENST00000403073 CNTD1Q8N815 330 aa17.4■□□□□ 0.38
PTCHD3P3-201ENST00000403073 ZC3H10Q96K80 434 aaKnown RBP17.4■□□□□ 0.38
PTCHD3P3-201ENST00000403073 NUDCD1Q96RS6 583 aa17.4■□□□□ 0.38
PTCHD3P3-201ENST00000403073 IL12RB2Q99665 862 aa17.4■□□□□ 0.38
PTCHD3P3-201ENST00000403073 OSBPL1AQ9BXW6 950 aa17.4■□□□□ 0.38
PTCHD3P3-201ENST00000403073 BTBD1Q9H0C5 482 aa17.4■□□□□ 0.38
PTCHD3P3-201ENST00000403073 NOD2Q9HC29 1040 aa17.4■□□□□ 0.38
PTCHD3P3-201ENST00000403073 SCUBE2Q9NQ36 999 aa17.4■□□□□ 0.38
PTCHD3P3-201ENST00000403073 DYRK4Q9NR20 520 aa17.4■□□□□ 0.38
PTCHD3P3-201ENST00000403073 R3HDM2Q9Y2K5 976 aaKnown RBP17.4■□□□□ 0.38
PTCHD3P3-201ENST00000403073 TTLL3Q9Y4R7 772 aa17.4■□□□□ 0.38
PTCHD3P3-201ENST00000403073 CHD5Q8TDI0 1954 aa17.4■□□□□ 0.38
PTCHD3P3-201ENST00000403073 CKAP5Q14008 2032 aa17.39■□□□□ 0.37
PTCHD3P3-201ENST00000403073 FAM47DPA6NHR8 397 aa17.39■□□□□ 0.37
PTCHD3P3-201ENST00000403073 ATP1A1P05023 1023 aaKnown RBP17.39■□□□□ 0.37
PTCHD3P3-201ENST00000403073 HLA-DQB2P05538 268 aa17.39■□□□□ 0.37
PTCHD3P3-201ENST00000403073 ITGB7P26010 798 aa17.39■□□□□ 0.37
PTCHD3P3-201ENST00000403073 GNG11P61952 73 aa17.39■□□□□ 0.37
PTCHD3P3-201ENST00000403073 XRCC4Q13426 336 aa17.39■□□□□ 0.37
PTCHD3P3-201ENST00000403073 ZNF805Q5CZA5 627 aa17.39■□□□□ 0.37
PTCHD3P3-201ENST00000403073 ERN2Q76MJ5 926 aaKnown RBP17.39■□□□□ 0.37
PTCHD3P3-201ENST00000403073 LPCAT2Q7L5N7 544 aa17.39■□□□□ 0.37
PTCHD3P3-201ENST00000403073 C11orf74Q86VG3 221 aa17.39■□□□□ 0.37
PTCHD3P3-201ENST00000403073 SUMF1Q8NBK3 374 aa17.39■□□□□ 0.37
PTCHD3P3-201ENST00000403073 OR14C36Q8NHC7 312 aa17.39■□□□□ 0.37
PTCHD3P3-201ENST00000403073 PPP1R16AQ96I34 528 aa17.39■□□□□ 0.37
PTCHD3P3-201ENST00000403073 QKIQ96PU8 341 aaKnown RBP eCLIP17.39■□□□□ 0.37
PTCHD3P3-201ENST00000403073 SEMA3CQ99985 751 aa17.39■□□□□ 0.37
PTCHD3P3-201ENST00000403073 HDAC8Q9BY41 377 aa17.39■□□□□ 0.37
PTCHD3P3-201ENST00000403073 SUV39H2Q9H5I1 410 aa17.39■□□□□ 0.37
PTCHD3P3-201ENST00000403073 SGK2Q9HBY8 427 aa17.39■□□□□ 0.37
PTCHD3P3-201ENST00000403073 FZD4Q9ULV1 537 aa17.39■□□□□ 0.37
PTCHD3P3-201ENST00000403073 ATP8A1Q9Y2Q0 1164 aa17.39■□□□□ 0.37
PTCHD3P3-201ENST00000403073 C16orf96A6NNT2 1141 aa17.38■□□□□ 0.37
PTCHD3P3-201ENST00000403073 HACD1B0YJ81 288 aa17.38■□□□□ 0.37
PTCHD3P3-201ENST00000403073 CEP104O60308 925 aa17.38■□□□□ 0.37
PTCHD3P3-201ENST00000403073 RHOBTB1O94844 696 aa17.38■□□□□ 0.37
PTCHD3P3-201ENST00000403073 SEMA4FO95754 770 aa17.38■□□□□ 0.37
PTCHD3P3-201ENST00000403073 MSNP26038 577 aaKnown RBP17.38■□□□□ 0.37
PTCHD3P3-201ENST00000403073 PTPN3P26045 913 aa17.38■□□□□ 0.37
PTCHD3P3-201ENST00000403073 RBL1P28749 1068 aa17.38■□□□□ 0.37
PTCHD3P3-201ENST00000403073 AP1S1P61966 158 aa17.38■□□□□ 0.37
PTCHD3P3-201ENST00000403073 DSC2Q02487 901 aa17.38■□□□□ 0.37
PTCHD3P3-201ENST00000403073 NIPAL4Q0D2K0 466 aa17.38■□□□□ 0.37
PTCHD3P3-201ENST00000403073 WASHC5Q12768 1159 aa17.38■□□□□ 0.37
PTCHD3P3-201ENST00000403073 ELF2Q15723 593 aa17.38■□□□□ 0.37
PTCHD3P3-201ENST00000403073 SLC45A4Q5BKX6 768 aa17.38■□□□□ 0.37
PTCHD3P3-201ENST00000403073 PIP5KL1Q5T9C9 394 aa17.38■□□□□ 0.37
PTCHD3P3-201ENST00000403073 AGBL4Q5VU57 503 aa17.38■□□□□ 0.37
PTCHD3P3-201ENST00000403073 PMS2CLQ68D20 193 aa17.38■□□□□ 0.37
PTCHD3P3-201ENST00000403073 PARS2Q7L3T8 475 aaKnown RBP17.38■□□□□ 0.37
PTCHD3P3-201ENST00000403073 ARMCX6Q7L4S7 300 aa17.38■□□□□ 0.37
PTCHD3P3-201ENST00000403073 TTC13Q8NBP0 860 aa17.38■□□□□ 0.37
PTCHD3P3-201ENST00000403073 HTR3CQ8WXA8 447 aa17.38■□□□□ 0.37
PTCHD3P3-201ENST00000403073 FAM131CQ96AQ9 280 aa17.38■□□□□ 0.37
PTCHD3P3-201ENST00000403073 AGAP3Q96P47 875 aa17.38■□□□□ 0.37
PTCHD3P3-201ENST00000403073 TUBGCP5Q96RT8 1024 aa17.38■□□□□ 0.37
PTCHD3P3-201ENST00000403073 POLR1EQ9GZS1 481 aaKnown RBP17.38■□□□□ 0.37
PTCHD3P3-201ENST00000403073 SEMA4AQ9H3S1 761 aa17.38■□□□□ 0.37
PTCHD3P3-201ENST00000403073 C6orf106Q9H6K1 298 aaPredicted RBP17.38■□□□□ 0.37
PTCHD3P3-201ENST00000403073 ATP13A3Q9H7F0 1226 aa17.38■□□□□ 0.37
PTCHD3P3-201ENST00000403073 KCND1Q9NSA2 647 aa17.38■□□□□ 0.37
PTCHD3P3-201ENST00000403073 SMG5Q9UPR3 1016 aaKnown RBP17.38■□□□□ 0.37
PTCHD3P3-201ENST00000403073 PCDHGC4Q9Y5F7 938 aa17.38■□□□□ 0.37
PTCHD3P3-201ENST00000403073 RBP3P10745 1247 aa17.37■□□□□ 0.37
PTCHD3P3-201ENST00000403073 PTGER3P43115 390 aa17.37■□□□□ 0.37
PTCHD3P3-201ENST00000403073 MAPK8P45983 427 aa17.37■□□□□ 0.37
PTCHD3P3-201ENST00000403073 DHPSP49366 369 aaPredicted RBP17.37■□□□□ 0.37
PTCHD3P3-201ENST00000403073 ADPRHP54922 357 aa17.37■□□□□ 0.37
PTCHD3P3-201ENST00000403073 TAS2R38P59533 333 aa17.37■□□□□ 0.37
PTCHD3P3-201ENST00000403073 BCL2L1Q07817 233 aa17.37■□□□□ 0.37
PTCHD3P3-201ENST00000403073 IHHQ14623 411 aa17.37■□□□□ 0.37
PTCHD3P3-201ENST00000403073 GRM3Q14832 879 aa17.37■□□□□ 0.37
PTCHD3P3-201ENST00000403073 TEX44Q53QW1 395 aa17.37■□□□□ 0.37
PTCHD3P3-201ENST00000403073 FBXL19Q6PCT2 694 aa17.37■□□□□ 0.37
PTCHD3P3-201ENST00000403073 DARS2Q6PI48 645 aaKnown RBP17.37■□□□□ 0.37
PTCHD3P3-201ENST00000403073 TTC7BQ86TV6 843 aa17.37■□□□□ 0.37
PTCHD3P3-201ENST00000403073 SLC41A1Q8IVJ1 513 aa17.37■□□□□ 0.37
PTCHD3P3-201ENST00000403073 ARRDC2Q8TBH0 407 aa17.37■□□□□ 0.37
PTCHD3P3-201ENST00000403073 NKD2Q969F2 451 aaPredicted RBP17.37■□□□□ 0.37
PTCHD3P3-201ENST00000403073 ZNF641Q96N77 438 aaPredicted RBP17.37■□□□□ 0.37
PTCHD3P3-201ENST00000403073 WDR24Q96S15 920 aa17.37■□□□□ 0.37
PTCHD3P3-201ENST00000403073 AMACRQ9UHK6 382 aa17.37■□□□□ 0.37
PTCHD3P3-201ENST00000403073 RAB23Q9ULC3 237 aa17.37■□□□□ 0.37
PTCHD3P3-201ENST00000403073 TBC1D3DA0A087WVF3 549 aa17.36■□□□□ 0.37
PTCHD3P3-201ENST00000403073 TBC1D3IA0A087WXS9 549 aa17.36■□□□□ 0.37
PTCHD3P3-201ENST00000403073 TBC1D3EA0A087X179 549 aa17.36■□□□□ 0.37
PTCHD3P3-201ENST00000403073 TBC1D3KA0A087X1G2 549 aa17.36■□□□□ 0.37
PTCHD3P3-201ENST00000403073 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.36■□□□□ 0.37
PTCHD3P3-201ENST00000403073 TBC1D3FA6NER0 549 aaPredicted RBP17.36■□□□□ 0.37
PTCHD3P3-201ENST00000403073 PRR23AA6NEV1 266 aa17.36■□□□□ 0.37
PTCHD3P3-201ENST00000403073 TBC1D3LB9A6J9 549 aa17.36■□□□□ 0.37
PTCHD3P3-201ENST00000403073 PROB1E7EW31 1015 aa17.36■□□□□ 0.37
PTCHD3P3-201ENST00000403073 SLC7A4O43246 635 aa17.36■□□□□ 0.37
PTCHD3P3-201ENST00000403073 PLRG1O43660 514 aaKnown RBP17.36■□□□□ 0.37
PTCHD3P3-201ENST00000403073 LMNAP02545 664 aaKnown RBP17.36■□□□□ 0.37
PTCHD3P3-201ENST00000403073 FGGP02679 453 aa17.36■□□□□ 0.37
PTCHD3P3-201ENST00000403073 TBC1D3HP0C7X1 549 aa17.36■□□□□ 0.37
PTCHD3P3-201ENST00000403073 ADRB3P13945 408 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms