RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 C10orf107Q8IVU9 208 aa16.15■□□□□ 0.18
CHRFAM7A-203ENST00000401522 SCML4Q8N228 414 aa16.15■□□□□ 0.18
CHRFAM7A-203ENST00000401522 SCAMP5Q8TAC9 235 aa16.15■□□□□ 0.18
CHRFAM7A-203ENST00000401522 GPR152Q8TDT2 470 aa16.15■□□□□ 0.18
CHRFAM7A-203ENST00000401522 NDRG1Q92597 394 aaKnown RBP16.15■□□□□ 0.18
CHRFAM7A-203ENST00000401522 NTAN1Q96AB6 310 aa16.15■□□□□ 0.18
CHRFAM7A-203ENST00000401522 PANX3Q96QZ0 392 aa16.15■□□□□ 0.18
CHRFAM7A-203ENST00000401522 BRD8Q9H0E9 1235 aa16.15■□□□□ 0.18
CHRFAM7A-203ENST00000401522 CNGB3Q9NQW8 809 aa16.15■□□□□ 0.18
CHRFAM7A-203ENST00000401522 MAN1C1Q9NR34 630 aa16.15■□□□□ 0.18
CHRFAM7A-203ENST00000401522 SLC7A8Q9UHI5 535 aa16.15■□□□□ 0.18
CHRFAM7A-203ENST00000401522 FAM92AA1XBS5 289 aa16.15■□□□□ 0.18
CHRFAM7A-203ENST00000401522 NCAM2O15394 837 aa16.15■□□□□ 0.18
CHRFAM7A-203ENST00000401522 NEBLO76041 1014 aa16.15■□□□□ 0.18
CHRFAM7A-203ENST00000401522 FBXO21O94952 628 aa16.15■□□□□ 0.18
CHRFAM7A-203ENST00000401522 RTN3O95197 1032 aaPredicted RBP16.15■□□□□ 0.18
CHRFAM7A-203ENST00000401522 AP2A1O95782 977 aa16.15■□□□□ 0.18
CHRFAM7A-203ENST00000401522 ERVK-10P10266 1014 aa16.15■□□□□ 0.18
CHRFAM7A-203ENST00000401522 RALBP11234 206 aa16.15■□□□□ 0.18
CHRFAM7A-203ENST00000401522 ANPEPP15144 967 aa16.15■□□□□ 0.18
CHRFAM7A-203ENST00000401522 SPRP35270 261 aaPredicted RBP16.15■□□□□ 0.18
CHRFAM7A-203ENST00000401522 CPOXP36551 454 aa16.15■□□□□ 0.18
CHRFAM7A-203ENST00000401522 EPHB3P54753 998 aa16.15■□□□□ 0.18
CHRFAM7A-203ENST00000401522 ABCE1P61221 599 aaKnown RBP16.15■□□□□ 0.18
CHRFAM7A-203ENST00000401522 PITX1P78337 314 aaPredicted RBP16.15■□□□□ 0.18
CHRFAM7A-203ENST00000401522 TWF1Q12792 350 aa16.15■□□□□ 0.18
CHRFAM7A-203ENST00000401522 C1orf146Q5VVC0 180 aa16.15■□□□□ 0.18
CHRFAM7A-203ENST00000401522 PID1Q7Z2X4 250 aa16.15■□□□□ 0.18
CHRFAM7A-203ENST00000401522 SORT1Q99523 831 aa16.15■□□□□ 0.18
CHRFAM7A-203ENST00000401522 RBBP8Q99708 897 aa16.15■□□□□ 0.18
CHRFAM7A-203ENST00000401522 CEP41Q9BYV8 373 aa16.15■□□□□ 0.18
CHRFAM7A-203ENST00000401522 VCXQ9H320 206 aa16.15■□□□□ 0.18
CHRFAM7A-203ENST00000401522 FBXO44Q9H4M3 255 aa16.15■□□□□ 0.18
CHRFAM7A-203ENST00000401522 PIH1D1Q9NWS0 290 aaKnown RBP16.15■□□□□ 0.18
CHRFAM7A-203ENST00000401522 KLHL8Q9P2G9 620 aaPredicted RBP16.15■□□□□ 0.18
CHRFAM7A-203ENST00000401522 MTCH2Q9Y6C9 303 aa16.15■□□□□ 0.18
CHRFAM7A-203ENST00000401522 WASF2Q9Y6W5 498 aa16.15■□□□□ 0.18
CHRFAM7A-203ENST00000401522 SYNJ2BP-COX16A0A087WUM0 186 aa16.14■□□□□ 0.17
CHRFAM7A-203ENST00000401522 SLC38A8A6NNN8 435 aa16.14■□□□□ 0.17
CHRFAM7A-203ENST00000401522 ERI2A8K979 691 aaKnown RBP16.14■□□□□ 0.17
CHRFAM7A-203ENST00000401522 MTSS1O43312 755 aa16.14■□□□□ 0.17
CHRFAM7A-203ENST00000401522 SIN3BO75182 1162 aa16.14■□□□□ 0.17
CHRFAM7A-203ENST00000401522 FKBP6O75344 327 aa16.14■□□□□ 0.17
CHRFAM7A-203ENST00000401522 CPA3P15088 417 aa16.14■□□□□ 0.17
CHRFAM7A-203ENST00000401522 HOXA9P31269 272 aa16.14■□□□□ 0.17
CHRFAM7A-203ENST00000401522 HCAR3P49019 387 aa16.14■□□□□ 0.17
CHRFAM7A-203ENST00000401522 IDH3AP50213 366 aa16.14■□□□□ 0.17
CHRFAM7A-203ENST00000401522 SCAPQ12770 1279 aa16.14■□□□□ 0.17
CHRFAM7A-203ENST00000401522 ADGRE1Q14246 886 aa16.14■□□□□ 0.17
CHRFAM7A-203ENST00000401522 TCEAL5Q5H9L2 206 aa16.14■□□□□ 0.17
CHRFAM7A-203ENST00000401522 TMCO4Q5TGY1 634 aa16.14■□□□□ 0.17
CHRFAM7A-203ENST00000401522 ELMSAN1Q6PJG2 1045 aa16.14■□□□□ 0.17
CHRFAM7A-203ENST00000401522 TMEM184AQ6ZMB5 413 aa16.14■□□□□ 0.17
CHRFAM7A-203ENST00000401522 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.14■□□□□ 0.17
CHRFAM7A-203ENST00000401522 GIPC2Q8TF65 315 aa16.14■□□□□ 0.17
CHRFAM7A-203ENST00000401522 MYRFLQ96LU7 910 aa16.14■□□□□ 0.17
CHRFAM7A-203ENST00000401522 ZNF184Q99676 751 aaPredicted RBP16.14■□□□□ 0.17
CHRFAM7A-203ENST00000401522 SNX15Q9NRS6 342 aa16.14■□□□□ 0.17
CHRFAM7A-203ENST00000401522 PIGVQ9NUD9 493 aa16.14■□□□□ 0.17
CHRFAM7A-203ENST00000401522 BFARQ9NZS9 450 aa16.14■□□□□ 0.17
CHRFAM7A-203ENST00000401522 TMEM216Q9P0N5 145 aa16.14■□□□□ 0.17
CHRFAM7A-203ENST00000401522 COX16Q9P0S2 106 aa16.14■□□□□ 0.17
CHRFAM7A-203ENST00000401522 ASB3Q9Y575 518 aa16.14■□□□□ 0.17
CHRFAM7A-203ENST00000401522 DPPA5A6NC42 116 aa16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 SKAP2O75563 359 aaPredicted RBP16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 LRG1P02750 347 aa16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 MPOP05164 745 aa16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 LINGO3P0C6S8 592 aa16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 PTPN3P26045 913 aa16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 ADRA1BP35368 520 aa16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 COPAP53621 1224 aa16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 LIMK2P53671 638 aa16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 USP46P62068 366 aa16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 HYAL1Q12794 435 aa16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 NME3Q13232 169 aa16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 VEPH1Q14D04 833 aa16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 PPM1JQ5JR12 505 aa16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 PPM1LQ5SGD2 360 aa16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 AAGABQ6PD74 315 aa16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 MAVSQ7Z434 540 aa16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 OR6Y1Q8NGX8 325 aa16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 SREK1Q8WXA9 508 aaKnown RBP16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 PSMG2Q969U7 264 aa16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 CLPTM1LQ96KA5 538 aa16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 TTLL2Q9BWV7 592 aa16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 ULBP1Q9BZM6 244 aa16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 CASS4Q9NQ75 786 aa16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 TMPRSS4Q9NRS4 437 aa16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 NDE1Q9NXR1 346 aa16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 VANGL2Q9ULK5 521 aa16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 A0A088AWK7 358 aa16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 H2AFYO75367 372 aaKnown RBP16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 USP1O94782 785 aa16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 PAPLNO95428 1278 aa16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 HNRNPA1P09651 372 aaKnown RBP eCLIP16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 USP17L7P0C7H9 530 aa16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 HMGA1P17096 107 aaKnown RBP16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 YWHAQP27348 245 aa16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 DAOAP59103 153 aa16.13■□□□□ 0.17
CHRFAM7A-203ENST00000401522 PPIDQ08752 370 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms