RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 LRRC4CQ9HCJ2 640 aa18.34■□□□□ 0.53
COL18A1-204ENST00000400337 VPS45Q9NRW7 570 aa18.34■□□□□ 0.53
COL18A1-204ENST00000400337 TCRBV7S2A1N4TA0A589 114 aa18.34■□□□□ 0.53
COL18A1-204ENST00000400337 ITGA7Q13683 1181 aa18.34■□□□□ 0.53
COL18A1-204ENST00000400337 PIWIL4Q7Z3Z4 852 aaKnown RBP18.34■□□□□ 0.53
COL18A1-204ENST00000400337 RIBC2Q9H4K1 309 aa18.34■□□□□ 0.53
COL18A1-204ENST00000400337 GPR25O00155 361 aa18.34■□□□□ 0.53
COL18A1-204ENST00000400337 EPN2O95208 641 aa18.34■□□□□ 0.53
COL18A1-204ENST00000400337 CTNNB1P35222 781 aa18.34■□□□□ 0.53
COL18A1-204ENST00000400337 NOGQ13253 232 aa18.34■□□□□ 0.53
COL18A1-204ENST00000400337 ZCCHC8Q6NZY4 707 aaKnown RBP18.34■□□□□ 0.53
COL18A1-204ENST00000400337 MAGEC3Q8TD91 643 aa18.34■□□□□ 0.53
COL18A1-204ENST00000400337 RHBDL2Q9NX52 303 aa18.34■□□□□ 0.53
COL18A1-204ENST00000400337 IGKV6D-41A0A0C4DH26 115 aa18.33■□□□□ 0.53
COL18A1-204ENST00000400337 OR6C75A6NL08 312 aa18.33■□□□□ 0.53
COL18A1-204ENST00000400337 LRCH4O75427 683 aa18.33■□□□□ 0.53
COL18A1-204ENST00000400337 OR4Q2P0C623 313 aa18.33■□□□□ 0.53
COL18A1-204ENST00000400337 COX4I1P13073 169 aa18.33■□□□□ 0.53
COL18A1-204ENST00000400337 LPOP22079 712 aaPredicted RBP18.33■□□□□ 0.53
COL18A1-204ENST00000400337 AIF1P55008 147 aa18.33■□□□□ 0.53
COL18A1-204ENST00000400337 CERCAMQ5T4B2 595 aa18.33■□□□□ 0.53
COL18A1-204ENST00000400337 TYW3Q6IPR3 259 aaKnown RBP18.33■□□□□ 0.53
COL18A1-204ENST00000400337 SCIMPQ6UWF3 145 aa18.33■□□□□ 0.53
COL18A1-204ENST00000400337 LPCAT2Q7L5N7 544 aa18.33■□□□□ 0.53
COL18A1-204ENST00000400337 VN1R5Q7Z5H4 357 aa18.33■□□□□ 0.53
COL18A1-204ENST00000400337 ZDHHC13Q8IUH4 622 aa18.33■□□□□ 0.53
COL18A1-204ENST00000400337 TMEM199Q8N511 208 aa18.33■□□□□ 0.53
COL18A1-204ENST00000400337 C9orf16Q9BUW7 83 aa18.33■□□□□ 0.53
COL18A1-204ENST00000400337 BTRCQ9Y297 605 aa18.33■□□□□ 0.53
COL18A1-204ENST00000400337 A0A1W2PQH9 124 aa18.33■□□□□ 0.53
COL18A1-204ENST00000400337 ANKDD1BA6NHY2 528 aa18.33■□□□□ 0.53
COL18A1-204ENST00000400337 KCNH1O95259 989 aa18.33■□□□□ 0.53
COL18A1-204ENST00000400337 FGFR3P22607 806 aa18.33■□□□□ 0.53
COL18A1-204ENST00000400337 DUSP4Q13115 394 aa18.33■□□□□ 0.53
COL18A1-204ENST00000400337 C1DQ13901 141 aaKnown RBP18.33■□□□□ 0.53
COL18A1-204ENST00000400337 UBAP2LQ14157 1087 aaKnown RBP18.33■□□□□ 0.53
COL18A1-204ENST00000400337 FIBCD1Q8N539 461 aa18.33■□□□□ 0.53
COL18A1-204ENST00000400337 TBC1D10AQ9BXI6 508 aa18.33■□□□□ 0.53
COL18A1-204ENST00000400337 CAB39LQ9H9S4 337 aa18.33■□□□□ 0.53
COL18A1-204ENST00000400337 TSPAN1O60635 241 aa18.33■□□□□ 0.52
COL18A1-204ENST00000400337 PABPC1P11940 636 aaKnown RBP18.33■□□□□ 0.52
COL18A1-204ENST00000400337 HNRNPLP14866 589 aaKnown RBP eCLIP18.33■□□□□ 0.522e-7■■■■■ 48.5
COL18A1-204ENST00000400337 ELNP15502 786 aa18.33■□□□□ 0.52
COL18A1-204ENST00000400337 POTEHQ6S545 545 aa18.33■□□□□ 0.52
COL18A1-204ENST00000400337 ANKRD23Q86SG2 305 aa18.33■□□□□ 0.52
COL18A1-204ENST00000400337 PACS2Q86VP3 889 aa18.33■□□□□ 0.52
COL18A1-204ENST00000400337 C10orf107Q8IVU9 208 aa18.33■□□□□ 0.52
COL18A1-204ENST00000400337 CDK20Q8IZL9 346 aa18.33■□□□□ 0.52
COL18A1-204ENST00000400337 CFAP52Q8N1V2 620 aa18.33■□□□□ 0.52
COL18A1-204ENST00000400337 CDYL2Q8N8U2 506 aa18.33■□□□□ 0.52
COL18A1-204ENST00000400337 CXorf40AQ8TE69 158 aa18.33■□□□□ 0.52
COL18A1-204ENST00000400337 STARD8Q92502 1023 aa18.33■□□□□ 0.52
COL18A1-204ENST00000400337 NACC2Q96BF6 587 aa18.33■□□□□ 0.52
COL18A1-204ENST00000400337 MTERF3Q96E29 417 aa18.33■□□□□ 0.52
COL18A1-204ENST00000400337 HDAC3O15379 428 aa18.33■□□□□ 0.52
COL18A1-204ENST00000400337 MLYCDO95822 493 aa18.33■□□□□ 0.52
COL18A1-204ENST00000400337 SNRPB2P08579 225 aaKnown RBP18.33■□□□□ 0.52
COL18A1-204ENST00000400337 GABRB2P47870 512 aa18.33■□□□□ 0.52
COL18A1-204ENST00000400337 FAM187BQ17R55 369 aa18.33■□□□□ 0.52
COL18A1-204ENST00000400337 DHRSXQ8N5I4 330 aa18.33■□□□□ 0.52
COL18A1-204ENST00000400337 FBXO30Q8TB52 745 aa18.33■□□□□ 0.52
COL18A1-204ENST00000400337 SNX6Q9UNH7 406 aa18.33■□□□□ 0.52
COL18A1-204ENST00000400337 RAP2CQ9Y3L5 183 aa18.33■□□□□ 0.52
COL18A1-204ENST00000400337 PCDHB9Q9Y5E1 797 aa18.33■□□□□ 0.52
COL18A1-204ENST00000400337 SRRM3A6NNA2 597 aaPredicted RBP18.32■□□□□ 0.52
COL18A1-204ENST00000400337 ZNF839A8K0R7 811 aa18.32■□□□□ 0.52
COL18A1-204ENST00000400337 H3BN98 237 aa18.32■□□□□ 0.52
COL18A1-204ENST00000400337 LYPLA1O75608 230 aaPredicted RBP18.32■□□□□ 0.52
COL18A1-204ENST00000400337 NTRK1P04629 796 aa18.32■□□□□ 0.52
COL18A1-204ENST00000400337 TCF3P15923 654 aa18.32■□□□□ 0.52
COL18A1-204ENST00000400337 JAM2P57087 298 aa18.32■□□□□ 0.52
COL18A1-204ENST00000400337 SQLEQ14534 574 aa18.32■□□□□ 0.52
COL18A1-204ENST00000400337 TERB1Q8NA31 727 aa18.32■□□□□ 0.52
COL18A1-204ENST00000400337 C1QTNF7Q9BXJ2 289 aa18.32■□□□□ 0.52
COL18A1-204ENST00000400337 PRKAG3Q9UGI9 489 aa18.32■□□□□ 0.52
COL18A1-204ENST00000400337 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.32■□□□□ 0.52
COL18A1-204ENST00000400337 LCA5LO95447 670 aa18.32■□□□□ 0.52
COL18A1-204ENST00000400337 ADH1AP07327 375 aa18.32■□□□□ 0.52
COL18A1-204ENST00000400337 EPHA3P29320 983 aa18.32■□□□□ 0.52
COL18A1-204ENST00000400337 CCDC92Q53HC0 331 aaPredicted RBP18.32■□□□□ 0.52
COL18A1-204ENST00000400337 LIPMQ5VYY2 423 aa18.32■□□□□ 0.52
COL18A1-204ENST00000400337 ZNF184Q99676 751 aaPredicted RBP18.32■□□□□ 0.52
COL18A1-204ENST00000400337 SALL4Q9UJQ4 1053 aa18.32■□□□□ 0.52
COL18A1-204ENST00000400337 BIRC5O15392 142 aa18.32■□□□□ 0.52
COL18A1-204ENST00000400337 TNFAIP8O95379 198 aa18.32■□□□□ 0.52
COL18A1-204ENST00000400337 CLTBP09497 229 aa18.32■□□□□ 0.52
COL18A1-204ENST00000400337 ICAM3P32942 547 aa18.32■□□□□ 0.52
COL18A1-204ENST00000400337 KCNJ2P63252 427 aa18.32■□□□□ 0.52
COL18A1-204ENST00000400337 GBE1Q04446 702 aa18.32■□□□□ 0.52
COL18A1-204ENST00000400337 NEDD8Q15843 81 aa18.32■□□□□ 0.52
COL18A1-204ENST00000400337 RAET1GQ6H3X3 334 aa18.32■□□□□ 0.52
COL18A1-204ENST00000400337 CYP20A1Q6UW02 462 aa18.32■□□□□ 0.52
COL18A1-204ENST00000400337 CYP4Z2PQ8N1L4 340 aa18.32■□□□□ 0.52
COL18A1-204ENST00000400337 OR4L1Q8NH43 312 aa18.32■□□□□ 0.52
COL18A1-204ENST00000400337 ZNF398Q8TD17 642 aa18.32■□□□□ 0.52
COL18A1-204ENST00000400337 TTPALQ9BTX7 342 aa18.32■□□□□ 0.52
COL18A1-204ENST00000400337 ARMC7Q9H6L4 198 aa18.32■□□□□ 0.52
COL18A1-204ENST00000400337 ZFP14Q9HCL3 533 aa18.32■□□□□ 0.52
COL18A1-204ENST00000400337 SLC17A7Q9P2U7 560 aa18.32■□□□□ 0.52
COL18A1-204ENST00000400337 ULK1O75385 1050 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms