RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 HM13Q8TCT9 377 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 ITFG2Q969R8 447 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 RAD51AP1Q96B01 352 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 PABPC5Q96DU9 382 aaKnown RBP8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 RNPC3Q96LT9 517 aaKnown RBP8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 KCNIP2Q9NS61 270 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 SORCS3Q9UPU3 1222 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 PNPP00491 289 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 GNRH1P01148 92 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 TNFRSF8P28908 595 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 DUOXA2Q1HG44 320 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 FAM160B2Q86V87 743 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 FOXP4Q8IVH2 680 aaPredicted RBP8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 C12orf65Q9H3J6 166 aaKnown RBP8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 KANSL2Q9H9L4 492 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 COMMD3Q9UBI1 195 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 PCDHGC5Q9Y5F6 944 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 ASXL1Q8IXJ9 1541 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 NCAPD2Q15021 1401 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 PLA2G4BP0C869 781 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 CYP27A1Q02318 531 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 TMEM132EQ6IEE7 984 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 SPATA6LQ8N4H0 392 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 XAGE3Q8WTP9 111 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 MASTLQ96GX5 879 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 FUT8Q9BYC5 575 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 KCNJ14Q9UNX9 436 aa8.66□□□□□ -1.02
CACNA1C-220ENST00000399655 SSX5O60225 188 aa8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 ASMTP46597 345 aa8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 TUFMP49411 452 aaKnown RBP8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 GPRC6AQ5T6X5 926 aa8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 PAMR1Q6UXH9 720 aa8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 ZNF276Q8N554 614 aa8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 REPS2Q8NFH8 660 aa8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 ING5Q8WYH8 240 aa8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 MED8Q96G25 268 aa8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 RNF26Q9BY78 433 aaPredicted RBP8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 POLR3BQ9NW08 1133 aaPredicted RBP8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 PPIP5K1Q6PFW1 1433 aa8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 TLX3O43711 291 aaPredicted RBP8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 CPSF4O95639 269 aaKnown RBP8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 SCTRP47872 440 aa8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 TRAPPC11Q7Z392 1133 aa8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 PPIL6Q8IXY8 311 aa8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 SLITRK1Q96PX8 696 aa8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 MRPL4Q9BYD3 311 aaKnown RBP8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 OR10A4Q9H209 315 aa8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 TRPV4Q9HBA0 871 aa8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 ZNF334Q9HCZ1 680 aaPredicted RBP8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 BIN3Q9NQY0 253 aa8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 ADAMTS1Q9UHI8 967 aa8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 ALDH3B2P48448 385 aa8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 FABP6P51161 128 aa8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 BNIP1Q12981 228 aa8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 RNF145Q96MT1 663 aa8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 PER2O15055 1255 aa8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 MTA2O94776 668 aa8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 MAPK3P27361 379 aaPredicted RBP8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 GNMTQ14749 295 aa8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 MLIPQ5VWP3 458 aa8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 ZNF677Q86XU0 584 aa8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 KLHL6Q8WZ60 621 aa8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 TNKS2Q9H2K2 1166 aa8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 ALG13Q9NP73 1137 aaKnown RBP8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 NDUFA8P51970 172 aa8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 MTM1Q13496 603 aa8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 SPESP1Q6UW49 350 aa8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 FAM126BQ8IXS8 530 aa8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 MTG1Q9BT17 334 aaPredicted RBP8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 ACTR8Q9H981 624 aa8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 OAS3Q9Y6K5 1087 aaKnown RBP8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 CPB1P15086 417 aa8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 GBX2P52951 348 aaPredicted RBP8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 PTGISQ16647 500 aa8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 TMEM104Q8NE00 496 aa8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 MRPL9Q9BYD2 267 aaKnown RBP8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 KCNH7Q9NS40 1196 aa8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 GPRC5DQ9NZD1 345 aa8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 GABBR1Q9UBS5 961 aa8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 DMGDHQ9UI17 866 aaKnown RBP8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 NOTOA8MTQ0 251 aa8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 PRMT5O14744 637 aaPredicted RBP8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 ACADMP11310 421 aa8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 AKR1B1P15121 316 aa8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 SLC26A5P58743 744 aa8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 SWT1Q5T5J6 900 aaKnown RBP8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 VPS25Q9BRG1 176 aa8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 STARD7Q9NQZ5 370 aa8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 TFCP2L1Q9NZI6 479 aa8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 PI4KBQ9UBF8 816 aa8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 FGD6Q6ZV73 1430 aa8.65□□□□□ -1.02
CACNA1C-220ENST00000399655 INMTO95050 263 aa8.65□□□□□ -1.03
CACNA1C-220ENST00000399655 HOXB9P17482 250 aaPredicted RBP8.65□□□□□ -1.03
CACNA1C-220ENST00000399655 MERTKQ12866 999 aa8.65□□□□□ -1.03
CACNA1C-220ENST00000399655 SUPT20HL1Q3ZLR7 823 aa8.65□□□□□ -1.03
CACNA1C-220ENST00000399655 TNNI3KQ59H18 835 aa8.65□□□□□ -1.03
CACNA1C-220ENST00000399655 TTLL10Q6ZVT0 673 aa8.65□□□□□ -1.03
CACNA1C-220ENST00000399655 SLC22A15Q8IZD6 547 aa8.65□□□□□ -1.03
CACNA1C-220ENST00000399655 ZNF565Q8N9K5 539 aa8.65□□□□□ -1.03
CACNA1C-220ENST00000399655 C18orf8Q96DM3 657 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms