RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 SLC8B1Q6J4K2 584 aa17.9■□□□□ 0.46
HLA-DQB1-204ENST00000399084 EPGNQ6UW88 154 aa17.9■□□□□ 0.46
HLA-DQB1-204ENST00000399084 RINLQ6ZS11 566 aa17.9■□□□□ 0.46
HLA-DQB1-204ENST00000399084 TMEM151AQ8N4L1 468 aa17.9■□□□□ 0.46
HLA-DQB1-204ENST00000399084 ATXN7L3BQ96GX2 97 aa17.9■□□□□ 0.46
HLA-DQB1-204ENST00000399084 FEM1CQ96JP0 617 aa17.9■□□□□ 0.46
HLA-DQB1-204ENST00000399084 RPRD1AQ96P16 312 aaPredicted RBP17.9■□□□□ 0.46
HLA-DQB1-204ENST00000399084 POLR1EQ9GZS1 481 aaKnown RBP17.9■□□□□ 0.46
HLA-DQB1-204ENST00000399084 NT5MQ9NPB1 228 aa17.9■□□□□ 0.46
HLA-DQB1-204ENST00000399084 DNMT3LQ9UJW3 386 aa17.9■□□□□ 0.46
HLA-DQB1-204ENST00000399084 RUVBL2Q9Y230 463 aaKnown RBP17.9■□□□□ 0.46
HLA-DQB1-204ENST00000399084 PRAMEF11O60813 436 aa17.89■□□□□ 0.46
HLA-DQB1-204ENST00000399084 ENO1P06733 434 aaKnown RBP17.89■□□□□ 0.46
HLA-DQB1-204ENST00000399084 ATP5C1P36542 298 aaKnown RBP17.89■□□□□ 0.46
HLA-DQB1-204ENST00000399084 SLC10A7Q0GE19 358 aa17.89■□□□□ 0.46
HLA-DQB1-204ENST00000399084 MSLNQ13421 630 aaPredicted RBP17.89■□□□□ 0.46
HLA-DQB1-204ENST00000399084 E2F5Q15329 346 aa17.89■□□□□ 0.46
HLA-DQB1-204ENST00000399084 ALFQ53S48 1182 aa17.89■□□□□ 0.46
HLA-DQB1-204ENST00000399084 RASIP1Q5U651 963 aa17.89■□□□□ 0.46
HLA-DQB1-204ENST00000399084 ALG1LQ6GMV1 187 aa17.89■□□□□ 0.46
HLA-DQB1-204ENST00000399084 TNS4Q8IZW8 715 aa17.89■□□□□ 0.46
HLA-DQB1-204ENST00000399084 LRRC43Q8N309 656 aa17.89■□□□□ 0.46
HLA-DQB1-204ENST00000399084 DNAJC5GQ8N7S2 189 aa17.89■□□□□ 0.46
HLA-DQB1-204ENST00000399084 SEPT5Q99719 369 aaPredicted RBP17.89■□□□□ 0.46
HLA-DQB1-204ENST00000399084 MRPL46Q9H2W6 279 aaKnown RBP17.89■□□□□ 0.46
HLA-DQB1-204ENST00000399084 CAB39LQ9H9S4 337 aa17.89■□□□□ 0.46
HLA-DQB1-204ENST00000399084 CREBZFQ9NS37 354 aa17.89■□□□□ 0.46
HLA-DQB1-204ENST00000399084 ZNF358Q9NW07 568 aa17.89■□□□□ 0.46
HLA-DQB1-204ENST00000399084 ARMCX1Q9P291 453 aa17.89■□□□□ 0.46
HLA-DQB1-204ENST00000399084 NYNRINQ9P2P1 1898 aaKnown RBP17.89■□□□□ 0.45
HLA-DQB1-204ENST00000399084 VWA8A3KMH1 1905 aa17.89■□□□□ 0.45
HLA-DQB1-204ENST00000399084 C2orf71A6NGG8 1288 aa17.89■□□□□ 0.45
HLA-DQB1-204ENST00000399084 SLC38A8A6NNN8 435 aa17.89■□□□□ 0.45
HLA-DQB1-204ENST00000399084 F5H5T6 163 aa17.89■□□□□ 0.45
HLA-DQB1-204ENST00000399084 NPHS1O60500 1241 aa17.89■□□□□ 0.45
HLA-DQB1-204ENST00000399084 TLR5O60602 858 aa17.89■□□□□ 0.45
HLA-DQB1-204ENST00000399084 LYPLA1O75608 230 aaPredicted RBP17.89■□□□□ 0.45
HLA-DQB1-204ENST00000399084 TRPA1O75762 1119 aa17.89■□□□□ 0.45
HLA-DQB1-204ENST00000399084 TM7SF2O76062 418 aa17.89■□□□□ 0.45
HLA-DQB1-204ENST00000399084 PENKP01210 267 aaPredicted RBP17.89■□□□□ 0.45
HLA-DQB1-204ENST00000399084 FGF1P05230 155 aa17.89■□□□□ 0.45
HLA-DQB1-204ENST00000399084 TPBGLP0DKB5 382 aa17.89■□□□□ 0.45
HLA-DQB1-204ENST00000399084 OR1E1P30953 314 aa17.89■□□□□ 0.45
HLA-DQB1-204ENST00000399084 SLC11A2P49281 568 aa17.89■□□□□ 0.45
HLA-DQB1-204ENST00000399084 ALDH18A1P54886 795 aaKnown RBP17.89■□□□□ 0.45
HLA-DQB1-204ENST00000399084 RCN2Q14257 317 aa17.89■□□□□ 0.45
HLA-DQB1-204ENST00000399084 RFTN1Q14699 578 aaPredicted RBP17.89■□□□□ 0.45
HLA-DQB1-204ENST00000399084 LBRQ14739 615 aaKnown RBP17.89■□□□□ 0.45
HLA-DQB1-204ENST00000399084 GPNMBQ14956 572 aa17.89■□□□□ 0.45
HLA-DQB1-204ENST00000399084 ZRSR2Q15696 482 aaKnown RBP17.89■□□□□ 0.45
HLA-DQB1-204ENST00000399084 FAM83EQ2M2I3 478 aa17.89■□□□□ 0.45
HLA-DQB1-204ENST00000399084 TRMT5Q32P41 509 aaKnown RBP17.89■□□□□ 0.45
HLA-DQB1-204ENST00000399084 RAP1GAP2Q684P5 730 aa17.89■□□□□ 0.45
HLA-DQB1-204ENST00000399084 RNF19BQ6ZMZ0 732 aa17.89■□□□□ 0.45
HLA-DQB1-204ENST00000399084 NET1Q7Z628 596 aaPredicted RBP17.89■□□□□ 0.45
HLA-DQB1-204ENST00000399084 TFAP2DQ7Z6R9 452 aa17.89■□□□□ 0.45
HLA-DQB1-204ENST00000399084 TREML1Q86YW5 311 aa17.89■□□□□ 0.45
HLA-DQB1-204ENST00000399084 IGSF8Q969P0 613 aa17.89■□□□□ 0.45
HLA-DQB1-204ENST00000399084 RSRC1Q96IZ7 334 aaKnown RBP17.89■□□□□ 0.45
HLA-DQB1-204ENST00000399084 EBF4Q9BQW3 602 aa17.89■□□□□ 0.45
HLA-DQB1-204ENST00000399084 GATA5Q9BWX5 397 aaPredicted RBP17.89■□□□□ 0.45
HLA-DQB1-204ENST00000399084 MFSD1Q9H3U5 465 aa17.89■□□□□ 0.45
HLA-DQB1-204ENST00000399084 PNPOQ9NVS9 261 aa17.89■□□□□ 0.45
HLA-DQB1-204ENST00000399084 STOML1Q9UBI4 398 aa17.89■□□□□ 0.45
HLA-DQB1-204ENST00000399084 L3MBTL1Q9Y468 752 aa17.89■□□□□ 0.45
HLA-DQB1-204ENST00000399084 J3KR12 359 aa17.88■□□□□ 0.45
HLA-DQB1-204ENST00000399084 HDAC3O15379 428 aa17.88■□□□□ 0.45
HLA-DQB1-204ENST00000399084 CNTN5O94779 1100 aa17.88■□□□□ 0.45
HLA-DQB1-204ENST00000399084 RBP1P09455 135 aa17.88■□□□□ 0.45
HLA-DQB1-204ENST00000399084 TACR2P21452 398 aa17.88■□□□□ 0.45
HLA-DQB1-204ENST00000399084 CD86P42081 329 aa17.88■□□□□ 0.45
HLA-DQB1-204ENST00000399084 SLC1A2P43004 574 aa17.88■□□□□ 0.45
HLA-DQB1-204ENST00000399084 PPP3CCP48454 512 aa17.88■□□□□ 0.45
HLA-DQB1-204ENST00000399084 RPL14P50914 215 aaKnown RBP17.88■□□□□ 0.45
HLA-DQB1-204ENST00000399084 ACVR1Q04771 509 aa17.88■□□□□ 0.45
HLA-DQB1-204ENST00000399084 ITKQ08881 620 aa17.88■□□□□ 0.45
HLA-DQB1-204ENST00000399084 DLG2Q15700 870 aa17.88■□□□□ 0.45
HLA-DQB1-204ENST00000399084 USP41Q3LFD5 358 aa17.88■□□□□ 0.45
HLA-DQB1-204ENST00000399084 CMPK2Q5EBM0 449 aa17.88■□□□□ 0.45
HLA-DQB1-204ENST00000399084 AGAP9Q5VTM2 703 aa17.88■□□□□ 0.45
HLA-DQB1-204ENST00000399084 ZNF470Q6ECI4 717 aa17.88■□□□□ 0.45
HLA-DQB1-204ENST00000399084 LRRC8EQ6NSJ5 796 aa17.88■□□□□ 0.45
HLA-DQB1-204ENST00000399084 KLC3Q6P597 504 aa17.88■□□□□ 0.45
HLA-DQB1-204ENST00000399084 PIWIL4Q7Z3Z4 852 aaKnown RBP17.88■□□□□ 0.45
HLA-DQB1-204ENST00000399084 MIB1Q86YT6 1006 aa17.88■□□□□ 0.45
HLA-DQB1-204ENST00000399084 FSTL5Q8N475 847 aaPredicted RBP17.88■□□□□ 0.45
HLA-DQB1-204ENST00000399084 TTC8Q8TAM2 541 aa17.88■□□□□ 0.45
HLA-DQB1-204ENST00000399084 ARRDC2Q8TBH0 407 aa17.88■□□□□ 0.45
HLA-DQB1-204ENST00000399084 PSMG2Q969U7 264 aa17.88■□□□□ 0.45
HLA-DQB1-204ENST00000399084 PABPC5Q96DU9 382 aaKnown RBP17.88■□□□□ 0.45
HLA-DQB1-204ENST00000399084 MTRRQ9UBK8 725 aa17.88■□□□□ 0.45
HLA-DQB1-204ENST00000399084 ARIH1Q9Y4X5 557 aaPredicted RBP17.88■□□□□ 0.45
HLA-DQB1-204ENST00000399084 TTC3P53804 2025 aa17.88■□□□□ 0.45
HLA-DQB1-204ENST00000399084 GOLGA8QA0A0J9YX86 632 aa17.87■□□□□ 0.45
HLA-DQB1-204ENST00000399084 GOLGA8OA6NCC3 632 aa17.87■□□□□ 0.45
HLA-DQB1-204ENST00000399084 PRR5-ARHGAP8B1AHC4 643 aa17.87■□□□□ 0.45
HLA-DQB1-204ENST00000399084 GOLGA8NF8WBI6 632 aa17.87■□□□□ 0.45
HLA-DQB1-204ENST00000399084 MATN2O00339 956 aa17.87■□□□□ 0.45
HLA-DQB1-204ENST00000399084 ACSL4O60488 711 aa17.87■□□□□ 0.45
HLA-DQB1-204ENST00000399084 CIB2O75838 187 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms