RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 TMEM121Q9BTD3 319 aa12.57□□□□□ -0.4
HLA-DQB1-203ENST00000399082 PABPC3Q9H361 631 aaKnown RBP12.57□□□□□ -0.4
HLA-DQB1-203ENST00000399082 ZDHHC6Q9H6R6 413 aa12.57□□□□□ -0.4
HLA-DQB1-203ENST00000399082 NOD2Q9HC29 1040 aa12.57□□□□□ -0.4
HLA-DQB1-203ENST00000399082 SEPT10Q9P0V9 454 aa12.57□□□□□ -0.4
HLA-DQB1-203ENST00000399082 AMACRQ9UHK6 382 aa12.57□□□□□ -0.4
HLA-DQB1-203ENST00000399082 SAR1BQ9Y6B6 198 aa12.57□□□□□ -0.4
HLA-DQB1-203ENST00000399082 CACNA1HO95180 2353 aa12.56□□□□□ -0.4
HLA-DQB1-203ENST00000399082 C10orf142B7Z368 130 aa12.56□□□□□ -0.4
HLA-DQB1-203ENST00000399082 TRAFD1O14545 582 aaPredicted RBP12.56□□□□□ -0.4
HLA-DQB1-203ENST00000399082 SPINT1O43278 529 aa12.56□□□□□ -0.4
HLA-DQB1-203ENST00000399082 ALDH1A2O94788 518 aa12.56□□□□□ -0.4
HLA-DQB1-203ENST00000399082 IL1BP01584 269 aa12.56□□□□□ -0.4
HLA-DQB1-203ENST00000399082 UGT2B4P06133 528 aa12.56□□□□□ -0.4
HLA-DQB1-203ENST00000399082 SLC8A1P32418 973 aa12.56□□□□□ -0.4
HLA-DQB1-203ENST00000399082 P2RY2P41231 377 aa12.56□□□□□ -0.4
HLA-DQB1-203ENST00000399082 RECQLP46063 649 aaPredicted RBP12.56□□□□□ -0.4
HLA-DQB1-203ENST00000399082 SCNN1BP51168 640 aa12.56□□□□□ -0.4
HLA-DQB1-203ENST00000399082 TPMTP51580 245 aa12.56□□□□□ -0.4
HLA-DQB1-203ENST00000399082 TRAF2Q12933 501 aa12.56□□□□□ -0.4
HLA-DQB1-203ENST00000399082 SRSF5Q13243 272 aaKnown RBP12.56□□□□□ -0.4
HLA-DQB1-203ENST00000399082 CCNG2Q16589 344 aa12.56□□□□□ -0.4
HLA-DQB1-203ENST00000399082 CYP1B1Q16678 543 aa12.56□□□□□ -0.4
HLA-DQB1-203ENST00000399082 DRICH1Q6PGQ1 229 aaPredicted RBP12.56□□□□□ -0.4
HLA-DQB1-203ENST00000399082 DARS2Q6PI48 645 aaKnown RBP12.56□□□□□ -0.4
HLA-DQB1-203ENST00000399082 PARS2Q7L3T8 475 aaKnown RBP12.56□□□□□ -0.4
HLA-DQB1-203ENST00000399082 PRPF39Q86UA1 669 aaKnown RBP12.56□□□□□ -0.4
HLA-DQB1-203ENST00000399082 CAMK1DQ8IU85 385 aa12.56□□□□□ -0.4
HLA-DQB1-203ENST00000399082 RYBPQ8N488 228 aaPredicted RBP12.56□□□□□ -0.4
HLA-DQB1-203ENST00000399082 FAM160A2Q8N612 972 aaPredicted RBP12.56□□□□□ -0.4
HLA-DQB1-203ENST00000399082 GLIS1Q8NBF1 620 aa12.56□□□□□ -0.4
HLA-DQB1-203ENST00000399082 ZBTB44Q8NCP5 570 aa12.56□□□□□ -0.4
HLA-DQB1-203ENST00000399082 NSMCE1Q8WV22 266 aa12.56□□□□□ -0.4
HLA-DQB1-203ENST00000399082 RTP4Q96DX8 246 aa12.56□□□□□ -0.4
HLA-DQB1-203ENST00000399082 CCDC114Q96M63 670 aa12.56□□□□□ -0.4
HLA-DQB1-203ENST00000399082 AGAP3Q96P47 875 aa12.56□□□□□ -0.4
HLA-DQB1-203ENST00000399082 SEMA3CQ99985 751 aa12.56□□□□□ -0.4
HLA-DQB1-203ENST00000399082 AP1M1Q9BXS5 423 aa12.56□□□□□ -0.4
HLA-DQB1-203ENST00000399082 CPEB1Q9BZB8 566 aaKnown RBP12.56□□□□□ -0.4
HLA-DQB1-203ENST00000399082 POLR1EQ9GZS1 481 aaKnown RBP12.56□□□□□ -0.4
HLA-DQB1-203ENST00000399082 ITM2CQ9NQX7 267 aa12.56□□□□□ -0.4
HLA-DQB1-203ENST00000399082 BCCIPQ9P287 314 aaKnown RBP eCLIP12.56□□□□□ -0.4
HLA-DQB1-203ENST00000399082 MBD1Q9UIS9 605 aaPredicted RBP12.56□□□□□ -0.4
HLA-DQB1-203ENST00000399082 IGHV1OR15-9A0A0B4J2B8 117 aa12.55□□□□□ -0.4
HLA-DQB1-203ENST00000399082 A0A1W2PP55 124 aa12.55□□□□□ -0.4
HLA-DQB1-203ENST00000399082 TSPAN11A1L157 253 aa12.55□□□□□ -0.4
HLA-DQB1-203ENST00000399082 KPNA3O00505 521 aaPredicted RBP12.55□□□□□ -0.4
HLA-DQB1-203ENST00000399082 KCNN4O15554 427 aa12.55□□□□□ -0.4
HLA-DQB1-203ENST00000399082 MTSS1O43312 755 aa12.55□□□□□ -0.4
HLA-DQB1-203ENST00000399082 HTRA2O43464 458 aaPredicted RBP12.55□□□□□ -0.4
HLA-DQB1-203ENST00000399082 LILRB5O75023 590 aa12.55□□□□□ -0.4
HLA-DQB1-203ENST00000399082 ADH1BP00325 375 aa12.55□□□□□ -0.4
HLA-DQB1-203ENST00000399082 DNTTP04053 509 aa12.55□□□□□ -0.4
HLA-DQB1-203ENST00000399082 PRNPP04156 253 aa12.55□□□□□ -0.4
HLA-DQB1-203ENST00000399082 NFKB1P19838 968 aa12.55□□□□□ -0.4
HLA-DQB1-203ENST00000399082 C5AR1P21730 350 aa12.55□□□□□ -0.4
HLA-DQB1-203ENST00000399082 BCKDHBP21953 392 aa12.55□□□□□ -0.4
HLA-DQB1-203ENST00000399082 CASQ1P31415 396 aa12.55□□□□□ -0.4
HLA-DQB1-203ENST00000399082 KCNJ1P48048 391 aa12.55□□□□□ -0.4
HLA-DQB1-203ENST00000399082 TAS2R38P59533 333 aa12.55□□□□□ -0.4
HLA-DQB1-203ENST00000399082 AP1S1P61966 158 aa12.55□□□□□ -0.4
HLA-DQB1-203ENST00000399082 SKOR1P84550 965 aa12.55□□□□□ -0.4
HLA-DQB1-203ENST00000399082 ZBTB16Q05516 673 aa12.55□□□□□ -0.4
HLA-DQB1-203ENST00000399082 CNTN1Q12860 1018 aa12.55□□□□□ -0.4
HLA-DQB1-203ENST00000399082 SNX1Q13596 522 aa12.55□□□□□ -0.4
HLA-DQB1-203ENST00000399082 BYSLQ13895 437 aaKnown RBP12.55□□□□□ -0.4
HLA-DQB1-203ENST00000399082 PIP5KL1Q5T9C9 394 aa12.55□□□□□ -0.4
HLA-DQB1-203ENST00000399082 AGBL4Q5VU57 503 aa12.55□□□□□ -0.4
HLA-DQB1-203ENST00000399082 GDPD4Q6W3E5 623 aa12.55□□□□□ -0.4
HLA-DQB1-203ENST00000399082 DSG4Q86SJ6 1040 aa12.55□□□□□ -0.4
HLA-DQB1-203ENST00000399082 PRUNE1Q86TP1 453 aa12.55□□□□□ -0.4
HLA-DQB1-203ENST00000399082 LONP2Q86WA8 852 aa12.55□□□□□ -0.4
HLA-DQB1-203ENST00000399082 PGBD3Q8N328 593 aa12.55□□□□□ -0.4
HLA-DQB1-203ENST00000399082 BBS5Q8N3I7 341 aa12.55□□□□□ -0.4
HLA-DQB1-203ENST00000399082 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.55□□□□□ -0.4
HLA-DQB1-203ENST00000399082 FAM71DQ8N9W8 422 aa12.55□□□□□ -0.4
HLA-DQB1-203ENST00000399082 C12orf50Q8NA57 414 aaPredicted RBP12.55□□□□□ -0.4
HLA-DQB1-203ENST00000399082 SPATA22Q8NHS9 363 aa12.55□□□□□ -0.4
HLA-DQB1-203ENST00000399082 CCDC110Q8TBZ0 833 aa12.55□□□□□ -0.4
HLA-DQB1-203ENST00000399082 ECHDC3Q96DC8 303 aa12.55□□□□□ -0.4
HLA-DQB1-203ENST00000399082 IMP4Q96G21 291 aaKnown RBP12.55□□□□□ -0.4
HLA-DQB1-203ENST00000399082 LRIG1Q96JA1 1093 aa12.55□□□□□ -0.4
HLA-DQB1-203ENST00000399082 CAPZA3Q96KX2 299 aa12.55□□□□□ -0.4
HLA-DQB1-203ENST00000399082 KLHL32Q96NJ5 620 aa12.55□□□□□ -0.4
HLA-DQB1-203ENST00000399082 FRMD8P1Q9BZ68 369 aaPredicted RBP12.55□□□□□ -0.4
HLA-DQB1-203ENST00000399082 GLOD4Q9HC38 313 aa12.55□□□□□ -0.4
HLA-DQB1-203ENST00000399082 CYP8B1Q9UNU6 501 aa12.55□□□□□ -0.4
HLA-DQB1-203ENST00000399082 INVSQ9Y283 1065 aa12.55□□□□□ -0.4
HLA-DQB1-203ENST00000399082 C5orf60A6NFR6 353 aa12.54□□□□□ -0.4
HLA-DQB1-203ENST00000399082 C1QTNF3-AMACRE9PGA6 284 aa12.54□□□□□ -0.4
HLA-DQB1-203ENST00000399082 F5H423 210 aaPredicted RBP12.54□□□□□ -0.4
HLA-DQB1-203ENST00000399082 H0Y858 1186 aa12.54□□□□□ -0.4
HLA-DQB1-203ENST00000399082 HRO43593 1189 aa12.54□□□□□ -0.4
HLA-DQB1-203ENST00000399082 FZD6O60353 706 aa12.54□□□□□ -0.4
HLA-DQB1-203ENST00000399082 RNASEH1O60930 286 aaKnown RBP12.54□□□□□ -0.4
HLA-DQB1-203ENST00000399082 PRLP01236 227 aa12.54□□□□□ -0.4
HLA-DQB1-203ENST00000399082 ITGAVP06756 1048 aa12.54□□□□□ -0.4
HLA-DQB1-203ENST00000399082 ITGB7P26010 798 aa12.54□□□□□ -0.4
HLA-DQB1-203ENST00000399082 DEKP35659 375 aaKnown RBP12.54□□□□□ -0.4
HLA-DQB1-203ENST00000399082 ABL2P42684 1182 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms