RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 RFTN1Q14699 578 aaPredicted RBP25.87■■□□□ 1.73
COL13A1-203ENST00000398969 DENND5AQ6IQ26 1287 aa25.87■■□□□ 1.73
COL13A1-203ENST00000398969 ESRP1Q6NXG1 681 aaKnown RBP25.87■■□□□ 1.73
COL13A1-203ENST00000398969 RNF148Q8N7C7 305 aa25.87■■□□□ 1.73
COL13A1-203ENST00000398969 IPMKQ8NFU5 416 aa25.87■■□□□ 1.73
COL13A1-203ENST00000398969 FCRL5Q96RD9 977 aa25.87■■□□□ 1.73
COL13A1-203ENST00000398969 HAPLN3Q96S86 360 aa25.87■■□□□ 1.73
COL13A1-203ENST00000398969 OMDQ99983 421 aa25.87■■□□□ 1.73
COL13A1-203ENST00000398969 UNKQ9C0B0 810 aaKnown RBP25.87■■□□□ 1.73
COL13A1-203ENST00000398969 NEU3Q9UQ49 428 aa25.87■■□□□ 1.73
COL13A1-203ENST00000398969 TRIP12Q14669 1992 aaPredicted RBP25.87■■□□□ 1.73
COL13A1-203ENST00000398969 STX16-NPEPL1H3BU86 382 aa25.86■■□□□ 1.73
COL13A1-203ENST00000398969 CA12O43570 354 aa25.86■■□□□ 1.73
COL13A1-203ENST00000398969 SMIM18P0DKX4 95 aa25.86■■□□□ 1.73
COL13A1-203ENST00000398969 AKR1A1P14550 325 aa25.86■■□□□ 1.73
COL13A1-203ENST00000398969 CCNCP24863 283 aa25.86■■□□□ 1.73
COL13A1-203ENST00000398969 CNGA3Q16281 694 aa25.86■■□□□ 1.73
COL13A1-203ENST00000398969 RWDD4Q6NW29 188 aaKnown RBP25.86■■□□□ 1.73
COL13A1-203ENST00000398969 SMARCD1Q96GM5 515 aa25.86■■□□□ 1.73
COL13A1-203ENST00000398969 KATNAL1Q9BW62 490 aa25.86■■□□□ 1.73
COL13A1-203ENST00000398969 ABT1Q9ULW3 272 aaKnown RBP25.86■■□□□ 1.73
COL13A1-203ENST00000398969 TCAF2A6NFQ2 919 aa25.86■■□□□ 1.73
COL13A1-203ENST00000398969 NPHS1O60500 1241 aa25.86■■□□□ 1.73
COL13A1-203ENST00000398969 PURAQ00577 322 aaKnown RBP25.86■■□□□ 1.73
COL13A1-203ENST00000398969 SATL1Q86VE3 508 aa25.86■■□□□ 1.73
COL13A1-203ENST00000398969 TICAM1Q8IUC6 712 aa25.86■■□□□ 1.73
COL13A1-203ENST00000398969 PPHLN1Q8NEY8 458 aaKnown RBP25.86■■□□□ 1.73
COL13A1-203ENST00000398969 RNF34Q969K3 372 aa25.86■■□□□ 1.73
COL13A1-203ENST00000398969 MAELQ96JY0 434 aaKnown RBP25.86■■□□□ 1.73
COL13A1-203ENST00000398969 FICDQ9BVA6 458 aa25.86■■□□□ 1.73
COL13A1-203ENST00000398969 MRPL46Q9H2W6 279 aaKnown RBP25.86■■□□□ 1.73
COL13A1-203ENST00000398969 CDH9Q9ULB4 789 aa25.86■■□□□ 1.73
COL13A1-203ENST00000398969 COMMD3-BMI1R4GMX3 469 aa25.86■■□□□ 1.73
COL13A1-203ENST00000398969 BCAS2O75934 225 aaPredicted RBP25.85■■□□□ 1.73
COL13A1-203ENST00000398969 PMLP29590 882 aa25.85■■□□□ 1.73
COL13A1-203ENST00000398969 SLC1A2P43004 574 aa25.85■■□□□ 1.73
COL13A1-203ENST00000398969 LILRA2Q8N149 483 aa25.85■■□□□ 1.73
COL13A1-203ENST00000398969 TRPV1Q8NER1 839 aa25.85■■□□□ 1.73
COL13A1-203ENST00000398969 NAT14Q8WUY8 206 aa25.85■■□□□ 1.73
COL13A1-203ENST00000398969 DLG3Q92796 817 aa25.85■■□□□ 1.73
COL13A1-203ENST00000398969 Q9H521 79 aa25.85■■□□□ 1.73
COL13A1-203ENST00000398969 COPS7BQ9H9Q2 264 aaPredicted RBP25.85■■□□□ 1.73
COL13A1-203ENST00000398969 GLOD4Q9HC38 313 aa25.85■■□□□ 1.73
COL13A1-203ENST00000398969 UBAP1Q9NZ09 502 aa25.85■■□□□ 1.73
COL13A1-203ENST00000398969 SLC2A6Q9UGQ3 507 aa25.85■■□□□ 1.73
COL13A1-203ENST00000398969 RAB26Q9ULW5 256 aa25.85■■□□□ 1.73
COL13A1-203ENST00000398969 ANXA9O76027 345 aa25.85■■□□□ 1.73
COL13A1-203ENST00000398969 CLCNKBP51801 687 aa25.85■■□□□ 1.73
COL13A1-203ENST00000398969 DYNC1I2Q13409 638 aaKnown RBP25.85■■□□□ 1.73
COL13A1-203ENST00000398969 ARHGAP12Q8IWW6 846 aa25.85■■□□□ 1.73
COL13A1-203ENST00000398969 ATPAF2Q8N5M1 289 aa25.85■■□□□ 1.73
COL13A1-203ENST00000398969 TXNDC5Q8NBS9 432 aaKnown RBP25.85■■□□□ 1.73
COL13A1-203ENST00000398969 C3orf58Q8NDZ4 430 aa25.85■■□□□ 1.73
COL13A1-203ENST00000398969 CATSPER1Q8NEC5 780 aa25.85■■□□□ 1.73
COL13A1-203ENST00000398969 NPAS2Q99743 824 aa25.85■■□□□ 1.73
COL13A1-203ENST00000398969 OSBPL2Q9H1P3 480 aa25.85■■□□□ 1.73
COL13A1-203ENST00000398969 SLC38A7Q9NVC3 462 aa25.85■■□□□ 1.73
COL13A1-203ENST00000398969 TCAF1Q9Y4C2 921 aa25.85■■□□□ 1.73
COL13A1-203ENST00000398969 SMIM31A0A1B0GVY4 71 aa25.84■■□□□ 1.73
COL13A1-203ENST00000398969 C17orf102A2RUQ5 167 aa25.84■■□□□ 1.73
COL13A1-203ENST00000398969 SDHDO14521 159 aa25.84■■□□□ 1.73
COL13A1-203ENST00000398969 CRTAMO95727 393 aa25.84■■□□□ 1.73
COL13A1-203ENST00000398969 ETS2P15036 469 aa25.84■■□□□ 1.73
COL13A1-203ENST00000398969 AFF1P51825 1210 aaKnown RBP25.84■■□□□ 1.73
COL13A1-203ENST00000398969 TAS2R39P59534 338 aa25.84■■□□□ 1.73
COL13A1-203ENST00000398969 SH2D4BQ5SQS7 431 aa25.84■■□□□ 1.73
COL13A1-203ENST00000398969 ADCY4Q8NFM4 1077 aa25.84■■□□□ 1.73
COL13A1-203ENST00000398969 DQX1Q8TE96 717 aaKnown RBP25.84■■□□□ 1.73
COL13A1-203ENST00000398969 IRGQQ8WZA9 623 aa25.84■■□□□ 1.73
COL13A1-203ENST00000398969 ELMO2Q96JJ3 720 aa25.84■■□□□ 1.73
COL13A1-203ENST00000398969 IL12RB2Q99665 862 aa25.84■■□□□ 1.73
COL13A1-203ENST00000398969 UBE2OQ9C0C9 1292 aaKnown RBP25.84■■□□□ 1.73
COL13A1-203ENST00000398969 CSNK1G1Q9HCP0 422 aa25.84■■□□□ 1.73
COL13A1-203ENST00000398969 VCX3AQ9NNX9 186 aa25.84■■□□□ 1.73
COL13A1-203ENST00000398969 NCKIPSDQ9NZQ3 722 aa25.84■■□□□ 1.73
COL13A1-203ENST00000398969 CENPFP49454 3210 aa25.84■■□□□ 1.73
COL13A1-203ENST00000398969 COL4A4P53420 1690 aaPredicted RBP25.84■■□□□ 1.73
COL13A1-203ENST00000398969 TRPC5OSA6NMA1 111 aa25.84■■□□□ 1.73
COL13A1-203ENST00000398969 DUSP11O75319 330 aaKnown RBP25.84■■□□□ 1.73
COL13A1-203ENST00000398969 MRPL57Q9BQC6 102 aaKnown RBP25.84■■□□□ 1.73
COL13A1-203ENST00000398969 EPB41L1Q9H4G0 881 aa25.84■■□□□ 1.73
COL13A1-203ENST00000398969 PRSS51A0A1B0GVH4 220 aa25.83■■□□□ 1.73
COL13A1-203ENST00000398969 ACOT8O14734 319 aa25.83■■□□□ 1.73
COL13A1-203ENST00000398969 RTN3O95197 1032 aaPredicted RBP25.83■■□□□ 1.73
COL13A1-203ENST00000398969 MYCNP04198 464 aaPredicted RBP25.83■■□□□ 1.73
COL13A1-203ENST00000398969 POTEHQ6S545 545 aa25.83■■□□□ 1.73
COL13A1-203ENST00000398969 PIWIL4Q7Z3Z4 852 aaKnown RBP25.83■■□□□ 1.73
COL13A1-203ENST00000398969 CCDC117Q8IWD4 279 aaPredicted RBP25.83■■□□□ 1.73
COL13A1-203ENST00000398969 HEXDCQ8WVB3 486 aa25.83■■□□□ 1.73
COL13A1-203ENST00000398969 SGF29Q96ES7 293 aa25.83■■□□□ 1.73
COL13A1-203ENST00000398969 TMA16Q96EY4 203 aaKnown RBP25.83■■□□□ 1.73
COL13A1-203ENST00000398969 KLHL32Q96NJ5 620 aa25.83■■□□□ 1.73
COL13A1-203ENST00000398969 ARHGAP39Q9C0H5 1083 aa25.83■■□□□ 1.73
COL13A1-203ENST00000398969 SIK2Q9H0K1 926 aa25.83■■□□□ 1.73
COL13A1-203ENST00000398969 POMKQ9H5K3 350 aa25.83■■□□□ 1.73
COL13A1-203ENST00000398969 SUDS3Q9H7L9 328 aaPredicted RBP25.83■■□□□ 1.73
COL13A1-203ENST00000398969 AP4B1Q9Y6B7 739 aa25.83■■□□□ 1.73
COL13A1-203ENST00000398969 MYLKQ15746 1914 aa25.83■■□□□ 1.73
COL13A1-203ENST00000398969 MYADML2A6NDP7 307 aa25.83■■□□□ 1.72
COL13A1-203ENST00000398969 PGM3O95394 542 aa25.83■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms