RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 LPCAT2Q7L5N7 544 aa15.97■□□□□ 0.15
MBD1-207ENST00000398488 LRRC49Q8IUZ0 686 aa15.97■□□□□ 0.15
MBD1-207ENST00000398488 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.97■□□□□ 0.15
MBD1-207ENST00000398488 OR14C36Q8NHC7 312 aa15.97■□□□□ 0.15
MBD1-207ENST00000398488 HSPA12BQ96MM6 686 aa15.97■□□□□ 0.15
MBD1-207ENST00000398488 MGME1Q9BQP7 344 aa15.97■□□□□ 0.15
MBD1-207ENST00000398488 TLR10Q9BXR5 811 aa15.97■□□□□ 0.15
MBD1-207ENST00000398488 ARRDC1-AS1Q9H2J1 176 aa15.97■□□□□ 0.15
MBD1-207ENST00000398488 NOD2Q9HC29 1040 aa15.97■□□□□ 0.15
MBD1-207ENST00000398488 PARD6AQ9NPB6 346 aa15.97■□□□□ 0.15
MBD1-207ENST00000398488 RBM22Q9NW64 420 aaKnown RBP eCLIP15.97■□□□□ 0.15
MBD1-207ENST00000398488 GGT7Q9UJ14 662 aa15.97■□□□□ 0.15
MBD1-207ENST00000398488 FZD4Q9ULV1 537 aa15.97■□□□□ 0.15
MBD1-207ENST00000398488 NCKAP1Q9Y2A7 1128 aa15.97■□□□□ 0.15
MBD1-207ENST00000398488 C16orf96A6NNT2 1141 aa15.96■□□□□ 0.15
MBD1-207ENST00000398488 RHOBTB1O94844 696 aa15.96■□□□□ 0.15
MBD1-207ENST00000398488 EPN2O95208 641 aa15.96■□□□□ 0.15
MBD1-207ENST00000398488 JCHAINP01591 159 aa15.96■□□□□ 0.15
MBD1-207ENST00000398488 HLA-DQB2P05538 268 aa15.96■□□□□ 0.15
MBD1-207ENST00000398488 IGHV4-34P06331 123 aa15.96■□□□□ 0.15
MBD1-207ENST00000398488 CCNB1P14635 433 aa15.96■□□□□ 0.15
MBD1-207ENST00000398488 MX2P20592 715 aa15.96■□□□□ 0.15
MBD1-207ENST00000398488 TGM2P21980 687 aa15.96■□□□□ 0.15
MBD1-207ENST00000398488 ITGB7P26010 798 aa15.96■□□□□ 0.15
MBD1-207ENST00000398488 CSNK1DP48730 415 aa15.96■□□□□ 0.15
MBD1-207ENST00000398488 PPP2CBP62714 309 aa15.96■□□□□ 0.15
MBD1-207ENST00000398488 PPP2CAP67775 309 aa15.96■□□□□ 0.15
MBD1-207ENST00000398488 NSUN2Q08J23 767 aaKnown RBP eCLIP15.96■□□□□ 0.15
MBD1-207ENST00000398488 NIPAL4Q0D2K0 466 aa15.96■□□□□ 0.15
MBD1-207ENST00000398488 AP1B1Q10567 949 aa15.96■□□□□ 0.15
MBD1-207ENST00000398488 HNRNPDQ14103 355 aaKnown RBP15.96■□□□□ 0.15
MBD1-207ENST00000398488 ZNF235Q14590 738 aa15.96■□□□□ 0.15
MBD1-207ENST00000398488 PRKD1Q15139 912 aaPredicted RBP15.96■□□□□ 0.15
MBD1-207ENST00000398488 ELF2Q15723 593 aa15.96■□□□□ 0.15
MBD1-207ENST00000398488 ZNF805Q5CZA5 627 aa15.96■□□□□ 0.15
MBD1-207ENST00000398488 ERN2Q76MJ5 926 aaKnown RBP15.96■□□□□ 0.15
MBD1-207ENST00000398488 ZC3H18Q86VM9 953 aaKnown RBP15.96■□□□□ 0.15
MBD1-207ENST00000398488 UBL4BQ8N7F7 174 aa15.96■□□□□ 0.15
MBD1-207ENST00000398488 FATE1Q969F0 183 aa15.96■□□□□ 0.15
MBD1-207ENST00000398488 FAM122AQ96E09 287 aa15.96■□□□□ 0.15
MBD1-207ENST00000398488 IL12RB2Q99665 862 aa15.96■□□□□ 0.15
MBD1-207ENST00000398488 ORAI3Q9BRQ5 295 aa15.96■□□□□ 0.15
MBD1-207ENST00000398488 HDAC8Q9BY41 377 aa15.96■□□□□ 0.15
MBD1-207ENST00000398488 CPEB1Q9BZB8 566 aaKnown RBP15.96■□□□□ 0.15
MBD1-207ENST00000398488 SGK2Q9HBY8 427 aa15.96■□□□□ 0.15
MBD1-207ENST00000398488 ITM2BQ9Y287 266 aa15.96■□□□□ 0.15
MBD1-207ENST00000398488 R3HDM2Q9Y2K5 976 aaKnown RBP15.96■□□□□ 0.15
MBD1-207ENST00000398488 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.96■□□□□ 0.15
MBD1-207ENST00000398488 BCLAF3A2AJT9 711 aaKnown RBP15.95■□□□□ 0.14
MBD1-207ENST00000398488 METTL12A8MUP2 240 aa15.95■□□□□ 0.14
MBD1-207ENST00000398488 PLRG1O43660 514 aaKnown RBP15.95■□□□□ 0.14
MBD1-207ENST00000398488 GFRA3O60609 400 aa15.95■□□□□ 0.14
MBD1-207ENST00000398488 PRKCGP05129 697 aa15.95■□□□□ 0.14
MBD1-207ENST00000398488 TIMP2P16035 220 aa15.95■□□□□ 0.14
MBD1-207ENST00000398488 SEMG2Q02383 582 aa15.95■□□□□ 0.14
MBD1-207ENST00000398488 DSC2Q02487 901 aa15.95■□□□□ 0.14
MBD1-207ENST00000398488 CREB5Q02930 508 aa15.95■□□□□ 0.14
MBD1-207ENST00000398488 PDK1Q15118 436 aa15.95■□□□□ 0.14
MBD1-207ENST00000398488 C11orf74Q86VG3 221 aa15.95■□□□□ 0.14
MBD1-207ENST00000398488 ARRDC2Q8TBH0 407 aa15.95■□□□□ 0.14
MBD1-207ENST00000398488 ACTL9Q8TC94 416 aa15.95■□□□□ 0.14
MBD1-207ENST00000398488 P3H4Q92791 437 aa15.95■□□□□ 0.14
MBD1-207ENST00000398488 BIRC7Q96CA5 298 aa15.95■□□□□ 0.14
MBD1-207ENST00000398488 RAB23Q9ULC3 237 aa15.95■□□□□ 0.14
MBD1-207ENST00000398488 EFR3BQ9Y2G0 817 aa15.95■□□□□ 0.14
MBD1-207ENST00000398488 PCDHGC4Q9Y5F7 938 aa15.95■□□□□ 0.14
MBD1-207ENST00000398488 EP300Q09472 2414 aaPredicted RBP15.95■□□□□ 0.14
MBD1-207ENST00000398488 DOCK9Q9BZ29 2069 aa15.95■□□□□ 0.14
MBD1-207ENST00000398488 PATE3B3GLJ2 98 aa15.94■□□□□ 0.14
MBD1-207ENST00000398488 TRAFD1O14545 582 aaPredicted RBP15.94■□□□□ 0.14
MBD1-207ENST00000398488 ENC1O14682 589 aa15.94■□□□□ 0.14
MBD1-207ENST00000398488 FSBPO95073 299 aa15.94■□□□□ 0.14
MBD1-207ENST00000398488 RETP07949 1114 aa15.94■□□□□ 0.14
MBD1-207ENST00000398488 ADRB3P13945 408 aa15.94■□□□□ 0.14
MBD1-207ENST00000398488 NR2C2P49116 596 aa15.94■□□□□ 0.14
MBD1-207ENST00000398488 IFI35P80217 286 aaPredicted RBP15.94■□□□□ 0.14
MBD1-207ENST00000398488 OTUD4Q01804 1114 aaKnown RBP15.94■□□□□ 0.14
MBD1-207ENST00000398488 SPEM2Q0P670 501 aa15.94■□□□□ 0.14
MBD1-207ENST00000398488 WASHC5Q12768 1159 aa15.94■□□□□ 0.14
MBD1-207ENST00000398488 TRAF2Q12933 501 aa15.94■□□□□ 0.14
MBD1-207ENST00000398488 KLF1Q13351 362 aaPredicted RBP15.94■□□□□ 0.14
MBD1-207ENST00000398488 NOMO1Q15155 1222 aa15.94■□□□□ 0.14
MBD1-207ENST00000398488 PTPRRQ15256 657 aa15.94■□□□□ 0.14
MBD1-207ENST00000398488 RPS6KA1Q15418 735 aa15.94■□□□□ 0.14
MBD1-207ENST00000398488 LYSMD4Q5XG99 296 aa15.94■□□□□ 0.14
MBD1-207ENST00000398488 TIGD7Q6NT04 549 aaPredicted RBP15.94■□□□□ 0.14
MBD1-207ENST00000398488 ALYREFQ86V81 257 aaKnown RBP15.94■□□□□ 0.14
MBD1-207ENST00000398488 C17orf53Q8N3J3 647 aaPredicted RBP15.94■□□□□ 0.14
MBD1-207ENST00000398488 CADM4Q8NFZ8 388 aa15.94■□□□□ 0.14
MBD1-207ENST00000398488 PIGKQ92643 395 aa15.94■□□□□ 0.14
MBD1-207ENST00000398488 LRIG1Q96JA1 1093 aa15.94■□□□□ 0.14
MBD1-207ENST00000398488 LOXL4Q96JB6 756 aa15.94■□□□□ 0.14
MBD1-207ENST00000398488 NUDCD1Q96RS6 583 aa15.94■□□□□ 0.14
MBD1-207ENST00000398488 SEMA3CQ99985 751 aa15.94■□□□□ 0.14
MBD1-207ENST00000398488 SUV39H2Q9H5I1 410 aa15.94■□□□□ 0.14
MBD1-207ENST00000398488 SEPT10Q9P0V9 454 aa15.94■□□□□ 0.14
MBD1-207ENST00000398488 ZFR2Q9UPR6 939 aaKnown RBP15.94■□□□□ 0.14
MBD1-207ENST00000398488 ATP8A1Q9Y2Q0 1164 aa15.94■□□□□ 0.14
MBD1-207ENST00000398488 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.94■□□□□ 0.14
MBD1-207ENST00000398488 FADS3Q9Y5Q0 445 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms