RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 PLRG1O43660 514 aaKnown RBP25.7■■□□□ 1.7
TSPAN4-207ENST00000397411 PCDH8O95206 1070 aa25.7■■□□□ 1.7
TSPAN4-207ENST00000397411 CCDC175P0C221 793 aa25.7■■□□□ 1.7
TSPAN4-207ENST00000397411 XPAP23025 273 aaPredicted RBP25.7■■□□□ 1.7
TSPAN4-207ENST00000397411 HSPA9P38646 679 aaKnown RBP25.7■■□□□ 1.7
TSPAN4-207ENST00000397411 CETN2P41208 172 aa25.7■■□□□ 1.7
TSPAN4-207ENST00000397411 SCNN1BP51168 640 aa25.7■■□□□ 1.7
TSPAN4-207ENST00000397411 NSUN2Q08J23 767 aaKnown RBP eCLIP25.7■■□□□ 1.7
TSPAN4-207ENST00000397411 LLGL1Q15334 1064 aa25.7■■□□□ 1.7
TSPAN4-207ENST00000397411 AGBL4Q5VU57 503 aa25.7■■□□□ 1.7
TSPAN4-207ENST00000397411 PRPF39Q86UA1 669 aaKnown RBP25.7■■□□□ 1.7
TSPAN4-207ENST00000397411 RNF10Q8N5U6 811 aaKnown RBP25.7■■□□□ 1.7
TSPAN4-207ENST00000397411 EXD1Q8NHP7 514 aa25.7■■□□□ 1.7
TSPAN4-207ENST00000397411 CPEB1Q9BZB8 566 aaKnown RBP25.7■■□□□ 1.7
TSPAN4-207ENST00000397411 HAUS2Q9NVX0 235 aa25.7■■□□□ 1.7
TSPAN4-207ENST00000397411 PCDHA3Q9Y5H8 950 aa25.7■■□□□ 1.7
TSPAN4-207ENST00000397411 DYNC1LI1Q9Y6G9 523 aaKnown RBP25.7■■□□□ 1.7
TSPAN4-207ENST00000397411 PI4KAP42356 2102 aa25.69■■□□□ 1.7
TSPAN4-207ENST00000397411 CCDC66A2RUB6 948 aa25.69■■□□□ 1.7
TSPAN4-207ENST00000397411 GRID2IPA4D2P6 1211 aa25.69■■□□□ 1.7
TSPAN4-207ENST00000397411 PATE3B3GLJ2 98 aa25.69■■□□□ 1.7
TSPAN4-207ENST00000397411 RNF103O00237 685 aa25.69■■□□□ 1.7
TSPAN4-207ENST00000397411 TGM1P22735 817 aa25.69■■□□□ 1.7
TSPAN4-207ENST00000397411 CCNCP24863 283 aa25.69■■□□□ 1.7
TSPAN4-207ENST00000397411 MMP13P45452 471 aa25.69■■□□□ 1.7
TSPAN4-207ENST00000397411 CSNK1DP48730 415 aa25.69■■□□□ 1.7
TSPAN4-207ENST00000397411 CCR5P51681 352 aa25.69■■□□□ 1.7
TSPAN4-207ENST00000397411 LMNB2Q03252 620 aa25.69■■□□□ 1.7
TSPAN4-207ENST00000397411 ITKQ08881 620 aa25.69■■□□□ 1.7
TSPAN4-207ENST00000397411 TFDP3Q5H9I0 405 aa25.69■■□□□ 1.7
TSPAN4-207ENST00000397411 PIP5KL1Q5T9C9 394 aa25.69■■□□□ 1.7
TSPAN4-207ENST00000397411 SLC9A4Q6AI14 798 aa25.69■■□□□ 1.7
TSPAN4-207ENST00000397411 KRT35Q92764 455 aa25.69■■□□□ 1.7
TSPAN4-207ENST00000397411 PSKH2Q96QS6 385 aa25.69■■□□□ 1.7
TSPAN4-207ENST00000397411 TPX2Q9ULW0 747 aaKnown RBP25.69■■□□□ 1.7
TSPAN4-207ENST00000397411 SLC6A14Q9UN76 642 aa25.69■■□□□ 1.7
TSPAN4-207ENST00000397411 VPS13AQ96RL7 3174 aa25.69■■□□□ 1.7
TSPAN4-207ENST00000397411 A0A1B0GTW7 788 aa25.68■■□□□ 1.7
TSPAN4-207ENST00000397411 PRR5-ARHGAP8B1AHC4 643 aa25.68■■□□□ 1.7
TSPAN4-207ENST00000397411 NEMP1O14524 444 aa25.68■■□□□ 1.7
TSPAN4-207ENST00000397411 KRT10P13645 584 aa25.68■■□□□ 1.7
TSPAN4-207ENST00000397411 ADRB3P13945 408 aa25.68■■□□□ 1.7
TSPAN4-207ENST00000397411 CD27P26842 260 aa25.68■■□□□ 1.7
TSPAN4-207ENST00000397411 CTNNA1P35221 906 aaKnown RBP25.68■■□□□ 1.7
TSPAN4-207ENST00000397411 CDKN2BP42772 138 aa25.68■■□□□ 1.7
TSPAN4-207ENST00000397411 MAPK8P45983 427 aa25.68■■□□□ 1.7
TSPAN4-207ENST00000397411 MARCKSL1P49006 195 aa25.68■■□□□ 1.7
TSPAN4-207ENST00000397411 SLC10A2Q12908 348 aaPredicted RBP25.68■■□□□ 1.7
TSPAN4-207ENST00000397411 TCEAL6Q6IPX3 200 aa25.68■■□□□ 1.7
TSPAN4-207ENST00000397411 BZW1Q7L1Q6 419 aaKnown RBP25.68■■□□□ 1.7
TSPAN4-207ENST00000397411 PARS2Q7L3T8 475 aaKnown RBP25.68■■□□□ 1.7
TSPAN4-207ENST00000397411 TTC7BQ86TV6 843 aa25.68■■□□□ 1.7
TSPAN4-207ENST00000397411 ZCCHC9Q8N567 271 aaKnown RBP25.68■■□□□ 1.7
TSPAN4-207ENST00000397411 PLD5Q8N7P1 536 aa25.68■■□□□ 1.7
TSPAN4-207ENST00000397411 TCEAL3Q969E4 200 aa25.68■■□□□ 1.7
TSPAN4-207ENST00000397411 TSGA13Q96PP4 275 aa25.68■■□□□ 1.7
TSPAN4-207ENST00000397411 SUV39H2Q9H5I1 410 aa25.68■■□□□ 1.7
TSPAN4-207ENST00000397411 ATP13A3Q9H7F0 1226 aa25.68■■□□□ 1.7
TSPAN4-207ENST00000397411 PREBQ9HCU5 417 aa25.68■■□□□ 1.7
TSPAN4-207ENST00000397411 SCUBE2Q9NQ36 999 aa25.68■■□□□ 1.7
TSPAN4-207ENST00000397411 DTLQ9NZJ0 730 aa25.68■■□□□ 1.7
TSPAN4-207ENST00000397411 MATN3O15232 486 aa25.67■■□□□ 1.7
TSPAN4-207ENST00000397411 BCAT2O15382 392 aaPredicted RBP25.67■■□□□ 1.7
TSPAN4-207ENST00000397411 CST8O60676 142 aa25.67■■□□□ 1.7
TSPAN4-207ENST00000397411 RNGTTO60942 597 aaKnown RBP25.67■■□□□ 1.7
TSPAN4-207ENST00000397411 CTNNA2P26232 953 aa25.67■■□□□ 1.7
TSPAN4-207ENST00000397411 SERPINA4P29622 427 aa25.67■■□□□ 1.7
TSPAN4-207ENST00000397411 MAT2AP31153 395 aaKnown RBP25.67■■□□□ 1.7
TSPAN4-207ENST00000397411 RWDD2BP57060 319 aa25.67■■□□□ 1.7
TSPAN4-207ENST00000397411 IRX4P78413 519 aa25.67■■□□□ 1.7
TSPAN4-207ENST00000397411 BCL2L1Q07817 233 aa25.67■■□□□ 1.7
TSPAN4-207ENST00000397411 PDK1Q15118 436 aa25.67■■□□□ 1.7
TSPAN4-207ENST00000397411 CCDC181Q5TID7 509 aa25.67■■□□□ 1.7
TSPAN4-207ENST00000397411 UBL4BQ8N7F7 174 aa25.67■■□□□ 1.7
TSPAN4-207ENST00000397411 LRRC57Q8N9N7 239 aa25.67■■□□□ 1.7
TSPAN4-207ENST00000397411 RAB7BQ96AH8 199 aa25.67■■□□□ 1.7
TSPAN4-207ENST00000397411 TUBGCP5Q96RT8 1024 aa25.67■■□□□ 1.7
TSPAN4-207ENST00000397411 NT5MQ9NPB1 228 aa25.67■■□□□ 1.7
TSPAN4-207ENST00000397411 PPP1R12AO14974 1030 aaPredicted RBP25.66■■□□□ 1.7
TSPAN4-207ENST00000397411 PIGNO95427 931 aa25.66■■□□□ 1.7
TSPAN4-207ENST00000397411 IGHV4-34P06331 123 aa25.66■■□□□ 1.7
TSPAN4-207ENST00000397411 SERPINF2P08697 491 aa25.66■■□□□ 1.7
TSPAN4-207ENST00000397411 RGRP47804 291 aa25.66■■□□□ 1.7
TSPAN4-207ENST00000397411 CCZ1BP86790 482 aa25.66■■□□□ 1.7
TSPAN4-207ENST00000397411 CCZ1P86791 482 aaPredicted RBP25.66■■□□□ 1.7
TSPAN4-207ENST00000397411 AP1B1Q10567 949 aa25.66■■□□□ 1.7
TSPAN4-207ENST00000397411 HNRNPDQ14103 355 aaKnown RBP25.66■■□□□ 1.7
TSPAN4-207ENST00000397411 PEAR1Q5VY43 1037 aaPredicted RBP25.66■■□□□ 1.7
TSPAN4-207ENST00000397411 NEK5Q6P3R8 708 aa25.66■■□□□ 1.7
TSPAN4-207ENST00000397411 SLC23A3Q6PIS1 610 aa25.66■■□□□ 1.7
TSPAN4-207ENST00000397411 NPNTQ6UXI9 565 aa25.66■■□□□ 1.7
TSPAN4-207ENST00000397411 NT5DC3Q86UY8 548 aa25.66■■□□□ 1.7
TSPAN4-207ENST00000397411 CCDC13Q8IYE1 715 aa25.66■■□□□ 1.7
TSPAN4-207ENST00000397411 LRRN4Q8WUT4 740 aa25.66■■□□□ 1.7
TSPAN4-207ENST00000397411 FAM131CQ96AQ9 280 aa25.66■■□□□ 1.7
TSPAN4-207ENST00000397411 FEM1CQ96JP0 617 aa25.66■■□□□ 1.7
TSPAN4-207ENST00000397411 ZNF641Q96N77 438 aaPredicted RBP25.66■■□□□ 1.7
TSPAN4-207ENST00000397411 HEMGNQ9BXL5 484 aa25.66■■□□□ 1.7
TSPAN4-207ENST00000397411 RBM22Q9NW64 420 aaKnown RBP eCLIP25.66■■□□□ 1.7
TSPAN4-207ENST00000397411 MYO15AQ9UKN7 3530 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms