RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 MYLK3Q32MK0 819 aa14.79□□□□□ -0.04
SEC13-208ENST00000397109 SETMARQ53H47 684 aaPredicted RBP14.79□□□□□ -0.04
SEC13-208ENST00000397109 KIAA1328Q86T90 577 aa14.79□□□□□ -0.04
SEC13-208ENST00000397109 ACRBPQ8NEB7 543 aa14.79□□□□□ -0.04
SEC13-208ENST00000397109 ZNF564Q8TBZ8 553 aaPredicted RBP14.79□□□□□ -0.04
SEC13-208ENST00000397109 ARHGEF26Q96DR7 871 aa14.79□□□□□ -0.04
SEC13-208ENST00000397109 SERAC1Q96JX3 654 aa14.79□□□□□ -0.04
SEC13-208ENST00000397109 GDAP1L1Q96MZ0 367 aa14.79□□□□□ -0.04
SEC13-208ENST00000397109 SLC6A18Q96N87 628 aa14.79□□□□□ -0.04
SEC13-208ENST00000397109 OSBPL1AQ9BXW6 950 aa14.79□□□□□ -0.04
SEC13-208ENST00000397109 PACSIN1Q9BY11 444 aa14.79□□□□□ -0.04
SEC13-208ENST00000397109 KLC2Q9H0B6 622 aa14.79□□□□□ -0.04
SEC13-208ENST00000397109 ZDHHC6Q9H6R6 413 aa14.79□□□□□ -0.04
SEC13-208ENST00000397109 EBF2Q9HAK2 575 aa14.79□□□□□ -0.04
SEC13-208ENST00000397109 LZTFL1Q9NQ48 299 aa14.79□□□□□ -0.04
SEC13-208ENST00000397109 AASDHPPTQ9NRN7 309 aa14.79□□□□□ -0.04
SEC13-208ENST00000397109 CWC15Q9P013 229 aaKnown RBP14.79□□□□□ -0.04
SEC13-208ENST00000397109 UBA2Q9UBT2 640 aaPredicted RBP14.79□□□□□ -0.04
SEC13-208ENST00000397109 PCDHA13Q9Y5I0 950 aa14.79□□□□□ -0.04
SEC13-208ENST00000397109 IGSF6O95976 241 aa14.78□□□□□ -0.04
SEC13-208ENST00000397109 CD59P13987 128 aa14.78□□□□□ -0.04
SEC13-208ENST00000397109 IL1R2P27930 398 aa14.78□□□□□ -0.04
SEC13-208ENST00000397109 MAGEA1P43355 309 aa14.78□□□□□ -0.04
SEC13-208ENST00000397109 TAS2R38P59533 333 aa14.78□□□□□ -0.04
SEC13-208ENST00000397109 RHOAP61586 193 aa14.78□□□□□ -0.04
SEC13-208ENST00000397109 ZNF805Q5CZA5 627 aa14.78□□□□□ -0.04
SEC13-208ENST00000397109 N4BP2L1Q5TBK1 243 aaPredicted RBP14.78□□□□□ -0.04
SEC13-208ENST00000397109 NAPEPLDQ6IQ20 393 aa14.78□□□□□ -0.04
SEC13-208ENST00000397109 FBXL19Q6PCT2 694 aa14.78□□□□□ -0.04
SEC13-208ENST00000397109 LEKR1Q6ZMV7 388 aa14.78□□□□□ -0.04
SEC13-208ENST00000397109 RNF10Q8N5U6 811 aaKnown RBP14.78□□□□□ -0.04
SEC13-208ENST00000397109 DEFB124Q8NES8 71 aa14.78□□□□□ -0.04
SEC13-208ENST00000397109 RAB7BQ96AH8 199 aa14.78□□□□□ -0.04
SEC13-208ENST00000397109 BTBD6Q96KE9 485 aa14.78□□□□□ -0.04
SEC13-208ENST00000397109 SLC39A8Q9C0K1 460 aa14.78□□□□□ -0.04
SEC13-208ENST00000397109 CTTNBP2NLQ9P2B4 639 aa14.78□□□□□ -0.04
SEC13-208ENST00000397109 MFHAS1Q9Y4C4 1052 aa14.78□□□□□ -0.04
SEC13-208ENST00000397109 PCDHGB2Q9Y5G2 931 aa14.78□□□□□ -0.04
SEC13-208ENST00000397109 SNX11Q9Y5W9 270 aa14.78□□□□□ -0.04
SEC13-208ENST00000397109 CTAGE9A4FU28 777 aa14.77□□□□□ -0.04
SEC13-208ENST00000397109 PRAMEF26H0Y7S4 382 aa14.77□□□□□ -0.04
SEC13-208ENST00000397109 KRIT1O00522 736 aa14.77□□□□□ -0.04
SEC13-208ENST00000397109 AP1G1O43747 822 aa14.77□□□□□ -0.04
SEC13-208ENST00000397109 MAGEC1O60732 1142 aa14.77□□□□□ -0.04
SEC13-208ENST00000397109 PRAMEF11O60813 436 aa14.77□□□□□ -0.04
SEC13-208ENST00000397109 RNGTTO60942 597 aaKnown RBP14.77□□□□□ -0.04
SEC13-208ENST00000397109 MTA2O94776 668 aa14.77□□□□□ -0.04
SEC13-208ENST00000397109 RARAP10276 462 aa14.77□□□□□ -0.04
SEC13-208ENST00000397109 ADRB3P13945 408 aa14.77□□□□□ -0.04
SEC13-208ENST00000397109 MAT2AP31153 395 aaKnown RBP14.77□□□□□ -0.04
SEC13-208ENST00000397109 CTSKP43235 329 aa14.77□□□□□ -0.04
SEC13-208ENST00000397109 PAPOLAP51003 745 aaKnown RBP14.77□□□□□ -0.04
SEC13-208ENST00000397109 OVGP1Q12889 678 aa14.77□□□□□ -0.04
SEC13-208ENST00000397109 DPYSQ14117 519 aa14.77□□□□□ -0.04
SEC13-208ENST00000397109 SUZ12Q15022 739 aaKnown RBP14.77□□□□□ -0.04
SEC13-208ENST00000397109 SMTNL2Q2TAL5 461 aa14.77□□□□□ -0.04
SEC13-208ENST00000397109 KCNT1Q5JUK3 1230 aa14.77□□□□□ -0.04
SEC13-208ENST00000397109 AFMIDQ63HM1 303 aa14.77□□□□□ -0.04
SEC13-208ENST00000397109 POLNQ7Z5Q5 900 aa14.77□□□□□ -0.04
SEC13-208ENST00000397109 IQCHQ86VS3 1027 aa14.77□□□□□ -0.04
SEC13-208ENST00000397109 HORMAD1Q86X24 394 aa14.77□□□□□ -0.04
SEC13-208ENST00000397109 MFSD2AQ8NA29 543 aa14.77□□□□□ -0.04
SEC13-208ENST00000397109 HSPH1Q92598 858 aa14.77□□□□□ -0.04
SEC13-208ENST00000397109 CELF6Q96J87 481 aaKnown RBP14.77□□□□□ -0.04
SEC13-208ENST00000397109 TM7SF3Q9NS93 570 aa14.77□□□□□ -0.04
SEC13-208ENST00000397109 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.77□□□□□ -0.04
SEC13-208ENST00000397109 TRPM6Q9BX84 2022 aa14.77□□□□□ -0.04
SEC13-208ENST00000397109 DOCK9Q9BZ29 2069 aa14.77□□□□□ -0.05
SEC13-208ENST00000397109 PLXNA2O75051 1894 aa14.77□□□□□ -0.05
SEC13-208ENST00000397109 A0A0A6YYK5 440 aaPredicted RBP14.76□□□□□ -0.05
SEC13-208ENST00000397109 A0A1W2PQU0 124 aa14.76□□□□□ -0.05
SEC13-208ENST00000397109 A0A1W2PR77 199 aa14.76□□□□□ -0.05
SEC13-208ENST00000397109 BTNL10A8MVZ5 291 aa14.76□□□□□ -0.05
SEC13-208ENST00000397109 PCDH8O95206 1070 aa14.76□□□□□ -0.05
SEC13-208ENST00000397109 SSR1P43307 286 aaKnown RBP14.76□□□□□ -0.05
SEC13-208ENST00000397109 HADHBP55084 474 aaKnown RBP14.76□□□□□ -0.05
SEC13-208ENST00000397109 SLC25A11Q02978 314 aaKnown RBP14.76□□□□□ -0.05
SEC13-208ENST00000397109 STAT4Q14765 748 aa14.76□□□□□ -0.05
SEC13-208ENST00000397109 GRM3Q14832 879 aa14.76□□□□□ -0.05
SEC13-208ENST00000397109 ZNF423Q2M1K9 1284 aa14.76□□□□□ -0.05
SEC13-208ENST00000397109 ZNF569Q5MCW4 686 aa14.76□□□□□ -0.05
SEC13-208ENST00000397109 ATXN7L2Q5T6C5 722 aaPredicted RBP14.76□□□□□ -0.05
SEC13-208ENST00000397109 ARHGAP12Q8IWW6 846 aa14.76□□□□□ -0.05
SEC13-208ENST00000397109 OR6K2Q8NGY2 324 aa14.76□□□□□ -0.05
SEC13-208ENST00000397109 RFFLQ8WZ73 363 aa14.76□□□□□ -0.05
SEC13-208ENST00000397109 FEM1CQ96JP0 617 aa14.76□□□□□ -0.05
SEC13-208ENST00000397109 CPEB1Q9BZB8 566 aaKnown RBP14.76□□□□□ -0.05
SEC13-208ENST00000397109 IL21RQ9HBE5 538 aa14.76□□□□□ -0.05
SEC13-208ENST00000397109 PDFQ9HBH1 243 aa14.76□□□□□ -0.05
SEC13-208ENST00000397109 RCOR3Q9P2K3 495 aaPredicted RBP14.76□□□□□ -0.05
SEC13-208ENST00000397109 FNDC3AQ9Y2H6 1198 aaKnown RBP14.76□□□□□ -0.05
SEC13-208ENST00000397109 C16orf96A6NNT2 1141 aa14.76□□□□□ -0.05
SEC13-208ENST00000397109 J3KR12 359 aa14.76□□□□□ -0.05
SEC13-208ENST00000397109 TLR4O00206 839 aa14.76□□□□□ -0.05
SEC13-208ENST00000397109 RNF103O00237 685 aa14.76□□□□□ -0.05
SEC13-208ENST00000397109 GIPC1O14908 333 aa14.76□□□□□ -0.05
SEC13-208ENST00000397109 SH3BP5O60239 455 aa14.76□□□□□ -0.05
SEC13-208ENST00000397109 URI1O94763 535 aaPredicted RBP14.76□□□□□ -0.05
SEC13-208ENST00000397109 PROSCO94903 275 aa14.76□□□□□ -0.05
SEC13-208ENST00000397109 WNT1P04628 370 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms