RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 MAGEB18Q96M61 343 aa17.59■□□□□ 0.41
MCF2L-208ENST00000397030 CENPXA8MT69 81 aa17.58■□□□□ 0.41
MCF2L-208ENST00000397030 CCNDBP1O95273 360 aa17.58■□□□□ 0.41
MCF2L-208ENST00000397030 EIF4BP23588 611 aaKnown RBP17.58■□□□□ 0.41
MCF2L-208ENST00000397030 KCNMA1Q12791 1236 aa17.58■□□□□ 0.41
MCF2L-208ENST00000397030 DEFB107AQ8IZN7 70 aa17.58■□□□□ 0.41
MCF2L-208ENST00000397030 FBXO15Q8NCQ5 510 aaPredicted RBP17.58■□□□□ 0.41
MCF2L-208ENST00000397030 STARD8Q92502 1023 aa17.58■□□□□ 0.41
MCF2L-208ENST00000397030 GINS4Q9BRT9 223 aa17.58■□□□□ 0.41
MCF2L-208ENST00000397030 LMAN2LQ9H0V9 348 aa17.58■□□□□ 0.41
MCF2L-208ENST00000397030 SLC28A2O43868 658 aa17.58■□□□□ 0.41
MCF2L-208ENST00000397030 APOBEC3HQ6NTF7 200 aaKnown RBP17.58■□□□□ 0.41
MCF2L-208ENST00000397030 ZBTB49Q6ZSB9 765 aa17.58■□□□□ 0.41
MCF2L-208ENST00000397030 TCF7L2Q9NQB0 619 aa17.58■□□□□ 0.41
MCF2L-208ENST00000397030 DNAJC11Q9NVH1 559 aa17.58■□□□□ 0.41
MCF2L-208ENST00000397030 BTRCQ9Y297 605 aa17.58■□□□□ 0.41
MCF2L-208ENST00000397030 DDR1Q08345 913 aa17.58■□□□□ 0.4
MCF2L-208ENST00000397030 DEF8Q6ZN54 512 aa17.58■□□□□ 0.4
MCF2L-208ENST00000397030 RASGRP3Q8IV61 690 aa17.58■□□□□ 0.4
MCF2L-208ENST00000397030 MTMR8Q96EF0 704 aa17.58■□□□□ 0.4
MCF2L-208ENST00000397030 TAGLN3Q9UI15 199 aa17.58■□□□□ 0.4
MCF2L-208ENST00000397030 CROTQ9UKG9 612 aa17.58■□□□□ 0.4
MCF2L-208ENST00000397030 ZNF521Q96K83 1311 aa17.58■□□□□ 0.4
MCF2L-208ENST00000397030 MDM4O15151 490 aa17.58■□□□□ 0.4
MCF2L-208ENST00000397030 ZNF155Q12901 538 aaPredicted RBP17.58■□□□□ 0.4
MCF2L-208ENST00000397030 ELOA2Q8IYF1 753 aaPredicted RBP17.58■□□□□ 0.4
MCF2L-208ENST00000397030 DMGDHQ9UI17 866 aaKnown RBP17.58■□□□□ 0.4
MCF2L-208ENST00000397030 PCDHB11Q9Y5F2 797 aa17.58■□□□□ 0.4
MCF2L-208ENST00000397030 CYP1A1P04798 512 aaPredicted RBP17.58■□□□□ 0.4
MCF2L-208ENST00000397030 CCNB1P14635 433 aa17.58■□□□□ 0.4
MCF2L-208ENST00000397030 ETS1P14921 441 aa17.58■□□□□ 0.4
MCF2L-208ENST00000397030 KCNJ5P48544 419 aa17.58■□□□□ 0.4
MCF2L-208ENST00000397030 C18orf25Q96B23 403 aaPredicted RBP17.58■□□□□ 0.4
MCF2L-208ENST00000397030 ZNF214Q9UL59 606 aaPredicted RBP17.58■□□□□ 0.4
MCF2L-208ENST00000397030 ZNF510Q9Y2H8 683 aa17.58■□□□□ 0.4
MCF2L-208ENST00000397030 H3BM21 787 aa17.57■□□□□ 0.4
MCF2L-208ENST00000397030 EIF3HO15372 352 aaKnown RBP eCLIP17.57■□□□□ 0.48e-7■■□□□ 12.1
MCF2L-208ENST00000397030 NFATC1O95644 943 aa17.57■□□□□ 0.4
MCF2L-208ENST00000397030 PIK3R1P27986 724 aa17.57■□□□□ 0.4
MCF2L-208ENST00000397030 HK2P52789 917 aa17.57■□□□□ 0.4
MCF2L-208ENST00000397030 OASLQ15646 514 aaKnown RBP17.57■□□□□ 0.4
MCF2L-208ENST00000397030 PMF1Q6P1K2 205 aa17.57■□□□□ 0.4
MCF2L-208ENST00000397030 ITFG1Q8TB96 612 aa17.57■□□□□ 0.4
MCF2L-208ENST00000397030 CLCC1Q96S66 551 aa17.57■□□□□ 0.4
MCF2L-208ENST00000397030 H3BNH8 94 aa17.57■□□□□ 0.4
MCF2L-208ENST00000397030 INHAP05111 366 aa17.57■□□□□ 0.4
MCF2L-208ENST00000397030 GP5P40197 560 aa17.57■□□□□ 0.4
MCF2L-208ENST00000397030 SCRN3Q0VDG4 424 aa17.57■□□□□ 0.4
MCF2L-208ENST00000397030 TRIM16LQ309B1 348 aa17.57■□□□□ 0.4
MCF2L-208ENST00000397030 SLAIN1Q8ND83 568 aa17.57■□□□□ 0.4
MCF2L-208ENST00000397030 ERGIC2Q96RQ1 377 aa17.57■□□□□ 0.4
MCF2L-208ENST00000397030 SEMA6AQ9H2E6 1030 aa17.57■□□□□ 0.4
MCF2L-208ENST00000397030 CHKBQ9Y259 395 aa17.57■□□□□ 0.4
MCF2L-208ENST00000397030 EML1O00423 815 aa17.57■□□□□ 0.4
MCF2L-208ENST00000397030 TPP1O14773 563 aa17.57■□□□□ 0.4
MCF2L-208ENST00000397030 SETD6Q8TBK2 473 aa17.57■□□□□ 0.4
MCF2L-208ENST00000397030 ACTRT2Q8TDY3 377 aa17.57■□□□□ 0.4
MCF2L-208ENST00000397030 ZNF483Q8TF39 744 aaPredicted RBP17.57■□□□□ 0.4
MCF2L-208ENST00000397030 WWP2O00308 870 aa17.57■□□□□ 0.4
MCF2L-208ENST00000397030 SLC31A1O15431 190 aa17.57■□□□□ 0.4
MCF2L-208ENST00000397030 PAEPP09466 180 aa17.57■□□□□ 0.4
MCF2L-208ENST00000397030 FGFR3P22607 806 aa17.57■□□□□ 0.4
MCF2L-208ENST00000397030 PLGLB1Q02325 96 aa17.57■□□□□ 0.4
MCF2L-208ENST00000397030 PHF19Q5T6S3 580 aa17.57■□□□□ 0.4
MCF2L-208ENST00000397030 EIF3MQ7L2H7 374 aaKnown RBP17.57■□□□□ 0.4
MCF2L-208ENST00000397030 OR10H5Q8NGA6 315 aa17.57■□□□□ 0.4
MCF2L-208ENST00000397030 SUN3Q8TAQ9 357 aa17.57■□□□□ 0.4
MCF2L-208ENST00000397030 ATL1Q8WXF7 558 aa17.57■□□□□ 0.4
MCF2L-208ENST00000397030 DIABLOQ9NR28 239 aa17.57■□□□□ 0.4
MCF2L-208ENST00000397030 PTGES3LE9PB15 166 aa17.57■□□□□ 0.4
MCF2L-208ENST00000397030 KPNA5O15131 536 aa17.57■□□□□ 0.4
MCF2L-208ENST00000397030 MSI1O43347 362 aaKnown RBP17.57■□□□□ 0.4
MCF2L-208ENST00000397030 ECDO95905 644 aaPredicted RBP17.57■□□□□ 0.4
MCF2L-208ENST00000397030 NT5EP21589 574 aa17.57■□□□□ 0.4
MCF2L-208ENST00000397030 RAD23AP54725 363 aa17.57■□□□□ 0.4
MCF2L-208ENST00000397030 HID1Q8IV36 788 aa17.57■□□□□ 0.4
MCF2L-208ENST00000397030 PORCNQ9H237 461 aa17.57■□□□□ 0.4
MCF2L-208ENST00000397030 IL17RBQ9NRM6 502 aa17.57■□□□□ 0.4
MCF2L-208ENST00000397030 FAM105AQ9NUU6 356 aa17.57■□□□□ 0.4
MCF2L-208ENST00000397030 INTS10Q9NVR2 710 aaKnown RBP17.57■□□□□ 0.4
MCF2L-208ENST00000397030 PSMD13Q9UNM6 376 aa17.57■□□□□ 0.4
MCF2L-208ENST00000397030 HACD1B0YJ81 288 aa17.56■□□□□ 0.4
MCF2L-208ENST00000397030 ITGA3P26006 1051 aa17.56■□□□□ 0.4
MCF2L-208ENST00000397030 SNRNP27Q8WVK2 155 aaKnown RBP17.56■□□□□ 0.4
MCF2L-208ENST00000397030 POLMQ9NP87 494 aaPredicted RBP17.56■□□□□ 0.4
MCF2L-208ENST00000397030 GRXCR2A6NFK2 248 aa17.56■□□□□ 0.4
MCF2L-208ENST00000397030 B4GALT5O43286 388 aa17.56■□□□□ 0.4
MCF2L-208ENST00000397030 MC4RP32245 332 aa17.56■□□□□ 0.4
MCF2L-208ENST00000397030 TAF5Q15542 800 aa17.56■□□□□ 0.4
MCF2L-208ENST00000397030 APTXQ7Z2E3 356 aaKnown RBP17.56■□□□□ 0.4
MCF2L-208ENST00000397030 ANKS1BQ7Z6G8 1248 aa17.56■□□□□ 0.4
MCF2L-208ENST00000397030 SAPCD2Q86UD0 394 aa17.56■□□□□ 0.4
MCF2L-208ENST00000397030 GALNT13Q8IUC8 556 aa17.56■□□□□ 0.4
MCF2L-208ENST00000397030 TTC29Q8NA56 475 aaPredicted RBP17.56■□□□□ 0.4
MCF2L-208ENST00000397030 HMGB4Q8WW32 186 aa17.56■□□□□ 0.4
MCF2L-208ENST00000397030 DTNBP1Q96EV8 351 aa17.56■□□□□ 0.4
MCF2L-208ENST00000397030 TBCBQ99426 244 aa17.56■□□□□ 0.4
MCF2L-208ENST00000397030 PHPT1Q9NRX4 125 aaPredicted RBP17.56■□□□□ 0.4
MCF2L-208ENST00000397030 UNC13BO14795 1591 aa17.56■□□□□ 0.4
MCF2L-208ENST00000397030 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms