RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 SCYL1Q96KG9 808 aa14.09□□□□□ -0.15
NUP98-204ENST00000397004 KIFC1Q9BW19 673 aa14.09□□□□□ -0.15
NUP98-204ENST00000397004 NR1H2P55055 460 aa14.09□□□□□ -0.15
NUP98-204ENST00000397004 NOMO2Q5JPE7 1267 aa14.09□□□□□ -0.15
NUP98-204ENST00000397004 B3GALNT2Q8NCR0 500 aa14.09□□□□□ -0.15
NUP98-204ENST00000397004 TSPAN14Q8NG11 270 aa14.09□□□□□ -0.15
NUP98-204ENST00000397004 EME1Q96AY2 570 aa14.09□□□□□ -0.15
NUP98-204ENST00000397004 DUSP16Q9BY84 665 aa14.09□□□□□ -0.15
NUP98-204ENST00000397004 TRIM8Q9BZR9 551 aa14.09□□□□□ -0.15
NUP98-204ENST00000397004 CYP4F12Q9HCS2 524 aa14.09□□□□□ -0.15
NUP98-204ENST00000397004 TRPC7Q9HCX4 862 aa14.09□□□□□ -0.15
NUP98-204ENST00000397004 AP4S1Q9Y587 144 aa14.09□□□□□ -0.15
NUP98-204ENST00000397004 H3BNH8 94 aa14.08□□□□□ -0.16
NUP98-204ENST00000397004 CYP2C8P10632 490 aa14.08□□□□□ -0.16
NUP98-204ENST00000397004 TSPAN8P19075 237 aa14.08□□□□□ -0.16
NUP98-204ENST00000397004 POU6F1Q14863 301 aa14.08□□□□□ -0.16
NUP98-204ENST00000397004 TMEM259Q4ZIN3 620 aa14.08□□□□□ -0.16
NUP98-204ENST00000397004 KLHL35Q6PF15 583 aa14.08□□□□□ -0.16
NUP98-204ENST00000397004 LAYNQ6UX15 382 aa14.08□□□□□ -0.16
NUP98-204ENST00000397004 RETREG3Q86VR2 466 aa14.08□□□□□ -0.16
NUP98-204ENST00000397004 FUNDC1Q8IVP5 155 aa14.08□□□□□ -0.16
NUP98-204ENST00000397004 ZMIZ2Q8NF64 920 aa14.08□□□□□ -0.16
NUP98-204ENST00000397004 TEKT5Q96M29 485 aa14.08□□□□□ -0.16
NUP98-204ENST00000397004 RHOBTB2Q9BYZ6 727 aa14.08□□□□□ -0.16
NUP98-204ENST00000397004 IGSF5Q9NSI5 407 aa14.08□□□□□ -0.16
NUP98-204ENST00000397004 CCDC167Q9P0B6 97 aa14.08□□□□□ -0.16
NUP98-204ENST00000397004 TRIM38O00635 465 aa14.08□□□□□ -0.16
NUP98-204ENST00000397004 GPR32O75388 356 aa14.08□□□□□ -0.16
NUP98-204ENST00000397004 ZNF23P17027 643 aa14.08□□□□□ -0.16
NUP98-204ENST00000397004 ADCYAP1R1P41586 468 aa14.08□□□□□ -0.16
NUP98-204ENST00000397004 CHRNA4P43681 627 aa14.08□□□□□ -0.16
NUP98-204ENST00000397004 PLK1P53350 603 aa14.08□□□□□ -0.16
NUP98-204ENST00000397004 RHDQ02161 417 aa14.08□□□□□ -0.16
NUP98-204ENST00000397004 EPHX4Q8IUS5 362 aa14.08□□□□□ -0.16
NUP98-204ENST00000397004 HERC6Q8IVU3 1022 aa14.08□□□□□ -0.16
NUP98-204ENST00000397004 GPC2Q8N158 579 aa14.08□□□□□ -0.16
NUP98-204ENST00000397004 FIBCD1Q8N539 461 aa14.08□□□□□ -0.16
NUP98-204ENST00000397004 OTUD5Q96G74 571 aa14.08□□□□□ -0.16
NUP98-204ENST00000397004 C3orf30Q96M34 536 aa14.08□□□□□ -0.16
NUP98-204ENST00000397004 OLFM1Q99784 485 aa14.08□□□□□ -0.16
NUP98-204ENST00000397004 EBF1Q9UH73 591 aa14.08□□□□□ -0.16
NUP98-204ENST00000397004 SARDHQ9UL12 918 aa14.08□□□□□ -0.16
NUP98-204ENST00000397004 SCN4AP35499 1836 aa14.08□□□□□ -0.16
NUP98-204ENST00000397004 TCRBV3S1A0A5B6 114 aa14.08□□□□□ -0.16
NUP98-204ENST00000397004 SLC22A2O15244 555 aa14.08□□□□□ -0.16
NUP98-204ENST00000397004 STRNO43815 780 aa14.08□□□□□ -0.16
NUP98-204ENST00000397004 PSMC3P17980 439 aa14.08□□□□□ -0.16
NUP98-204ENST00000397004 SLC1A2P43004 574 aa14.08□□□□□ -0.16
NUP98-204ENST00000397004 MAP3K7CLP57077 242 aa14.08□□□□□ -0.16
NUP98-204ENST00000397004 ANKDD1AQ495B1 522 aa14.08□□□□□ -0.16
NUP98-204ENST00000397004 REP15Q6BDI9 236 aa14.08□□□□□ -0.16
NUP98-204ENST00000397004 IL31Q6EBC2 164 aa14.08□□□□□ -0.16
NUP98-204ENST00000397004 TRIM67Q6ZTA4 783 aa14.08□□□□□ -0.16
NUP98-204ENST00000397004 ARMCX2Q7L311 632 aa14.08□□□□□ -0.16
NUP98-204ENST00000397004 CNOT11Q9UKZ1 510 aaKnown RBP14.08□□□□□ -0.16
NUP98-204ENST00000397004 PTGDR2Q9Y5Y4 395 aa14.08□□□□□ -0.16
NUP98-204ENST00000397004 HTRA2O43464 458 aaPredicted RBP14.07□□□□□ -0.16
NUP98-204ENST00000397004 TIPRLO75663 272 aa14.07□□□□□ -0.16
NUP98-204ENST00000397004 AFF1P51825 1210 aaKnown RBP14.07□□□□□ -0.16
NUP98-204ENST00000397004 GALNT2Q10471 571 aa14.07□□□□□ -0.16
NUP98-204ENST00000397004 APOBEC3FQ8IUX4 373 aaKnown RBP14.07□□□□□ -0.16
NUP98-204ENST00000397004 NDFIP2Q9NV92 336 aa14.07□□□□□ -0.16
NUP98-204ENST00000397004 GIMAP2Q9UG22 337 aa14.07□□□□□ -0.16
NUP98-204ENST00000397004 SNX13Q9Y5W8 968 aa14.07□□□□□ -0.16
NUP98-204ENST00000397004 A0A0G2JLL6 359 aaPredicted RBP14.07□□□□□ -0.16
NUP98-204ENST00000397004 ATP6AP2A0A1C7CYW4 349 aa14.07□□□□□ -0.16
NUP98-204ENST00000397004 PPP6CO00743 305 aa14.07□□□□□ -0.16
NUP98-204ENST00000397004 H2AFYO75367 372 aaKnown RBP14.07□□□□□ -0.16
NUP98-204ENST00000397004 ATP6AP2O75787 350 aa14.07□□□□□ -0.16
NUP98-204ENST00000397004 H6PDO95479 791 aa14.07□□□□□ -0.16
NUP98-204ENST00000397004 SLC12A1Q13621 1099 aa14.07□□□□□ -0.16
NUP98-204ENST00000397004 IHHQ14623 411 aa14.07□□□□□ -0.16
NUP98-204ENST00000397004 PRRT2Q7Z6L0 340 aaPredicted RBP14.07□□□□□ -0.16
NUP98-204ENST00000397004 RDH11Q8TC12 318 aa14.07□□□□□ -0.16
NUP98-204ENST00000397004 ANKRD49Q8WVL7 239 aa14.07□□□□□ -0.16
NUP98-204ENST00000397004 DLG3Q92796 817 aa14.07□□□□□ -0.16
NUP98-204ENST00000397004 HDAC11Q96DB2 347 aa14.07□□□□□ -0.16
NUP98-204ENST00000397004 OSMRQ99650 979 aa14.07□□□□□ -0.16
NUP98-204ENST00000397004 ULBP1Q9BZM6 244 aa14.07□□□□□ -0.16
NUP98-204ENST00000397004 ATXN3LQ9H3M9 355 aa14.07□□□□□ -0.16
NUP98-204ENST00000397004 POMKQ9H5K3 350 aa14.07□□□□□ -0.16
NUP98-204ENST00000397004 ELP3Q9H9T3 547 aa14.07□□□□□ -0.16
NUP98-204ENST00000397004 PLEKHA5Q9HAU0 1116 aa14.07□□□□□ -0.16
NUP98-204ENST00000397004 GDAP2Q9NXN4 497 aa14.07□□□□□ -0.16
NUP98-204ENST00000397004 CNOT6Q9ULM6 557 aaKnown RBP14.07□□□□□ -0.16
NUP98-204ENST00000397004 ARHGAP10A1A4S6 786 aa14.07□□□□□ -0.16
NUP98-204ENST00000397004 C9JVG2 144 aa14.07□□□□□ -0.16
NUP98-204ENST00000397004 ATP6V1B2P21281 511 aa14.07□□□□□ -0.16
NUP98-204ENST00000397004 TKTL1P51854 596 aa14.07□□□□□ -0.16
NUP98-204ENST00000397004 PDAP1Q13442 181 aaKnown RBP14.07□□□□□ -0.16
NUP98-204ENST00000397004 TMEM207Q6UWW9 146 aa14.07□□□□□ -0.16
NUP98-204ENST00000397004 KDELC2Q7Z4H8 507 aa14.07□□□□□ -0.16
NUP98-204ENST00000397004 EDEM1Q92611 657 aa14.07□□□□□ -0.16
NUP98-204ENST00000397004 UHRF1Q96T88 793 aaPredicted RBP14.07□□□□□ -0.16
NUP98-204ENST00000397004 HNRNPABQ99729 332 aaKnown RBP14.07□□□□□ -0.16
NUP98-204ENST00000397004 KATNBL1Q9H079 304 aa14.07□□□□□ -0.16
NUP98-204ENST00000397004 Q9H521 79 aa14.07□□□□□ -0.16
NUP98-204ENST00000397004 CAAP1Q9H8G2 361 aa14.07□□□□□ -0.16
NUP98-204ENST00000397004 CRTAC1Q9NQ79 661 aa14.07□□□□□ -0.16
NUP98-204ENST00000397004 SUCOQ9UBS9 1254 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms