RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 ALFQ53S48 1182 aa8.58□□□□□ -1.04
SCFD1-202ENST00000396629 CARD16Q5EG05 197 aa8.58□□□□□ -1.04
SCFD1-202ENST00000396629 BORAQ6PGQ7 559 aa8.58□□□□□ -1.04
SCFD1-202ENST00000396629 FAM26EQ8N5C1 309 aa8.58□□□□□ -1.04
SCFD1-202ENST00000396629 PCDH20Q8N6Y1 951 aaKnown RBP8.58□□□□□ -1.04
SCFD1-202ENST00000396629 SCG3Q8WXD2 468 aaKnown RBP8.58□□□□□ -1.04
SCFD1-202ENST00000396629 IGSF5Q9NSI5 407 aa8.58□□□□□ -1.04
SCFD1-202ENST00000396629 COX16Q9P0S2 106 aa8.58□□□□□ -1.04
SCFD1-202ENST00000396629 ARMCX3Q9UH62 379 aaPredicted RBP8.58□□□□□ -1.04
SCFD1-202ENST00000396629 ANAPC2Q9UJX6 822 aa8.58□□□□□ -1.04
SCFD1-202ENST00000396629 LRRK2Q5S007 2527 aa8.57□□□□□ -1.04
SCFD1-202ENST00000396629 USP9YO00507 2555 aaPredicted RBP8.57□□□□□ -1.04
SCFD1-202ENST00000396629 ZMPSTE24O75844 475 aa8.57□□□□□ -1.04
SCFD1-202ENST00000396629 ENDOD1O94919 500 aa8.57□□□□□ -1.04
SCFD1-202ENST00000396629 ALPIP09923 528 aa8.57□□□□□ -1.04
SCFD1-202ENST00000396629 EIF4A3P38919 411 aaKnown RBP8.57□□□□□ -1.04
SCFD1-202ENST00000396629 SYKP43405 635 aa8.57□□□□□ -1.04
SCFD1-202ENST00000396629 CCNHP51946 323 aaPredicted RBP8.57□□□□□ -1.04
SCFD1-202ENST00000396629 FKBP3Q00688 224 aaKnown RBP8.57□□□□□ -1.04
SCFD1-202ENST00000396629 GCNT1Q02742 428 aa8.57□□□□□ -1.04
SCFD1-202ENST00000396629 PPARDQ03181 441 aa8.57□□□□□ -1.04
SCFD1-202ENST00000396629 ARHGEF19Q8IW93 802 aa8.57□□□□□ -1.04
SCFD1-202ENST00000396629 PLPP6Q8IY26 295 aa8.57□□□□□ -1.04
SCFD1-202ENST00000396629 SMYD4Q8IYR2 804 aaPredicted RBP8.57□□□□□ -1.04
SCFD1-202ENST00000396629 PCDH19Q8TAB3 1148 aa8.57□□□□□ -1.04
SCFD1-202ENST00000396629 EPAS1Q99814 870 aa8.57□□□□□ -1.04
SCFD1-202ENST00000396629 EDEM3Q9BZQ6 932 aa8.57□□□□□ -1.04
SCFD1-202ENST00000396629 SIK2Q9H0K1 926 aa8.57□□□□□ -1.04
SCFD1-202ENST00000396629 SIRPGQ9P1W8 387 aa8.57□□□□□ -1.04
SCFD1-202ENST00000396629 DACH1Q9UI36 760 aa8.57□□□□□ -1.04
SCFD1-202ENST00000396629 GGT7Q9UJ14 662 aa8.57□□□□□ -1.04
SCFD1-202ENST00000396629 APPL1Q9UKG1 709 aa8.57□□□□□ -1.04
SCFD1-202ENST00000396629 GPR34Q9UPC5 381 aa8.57□□□□□ -1.04
SCFD1-202ENST00000396629 DOLKQ9UPQ8 538 aa8.57□□□□□ -1.04
SCFD1-202ENST00000396629 BLACEA4D250 179 aa8.56□□□□□ -1.04
SCFD1-202ENST00000396629 C16orf96A6NNT2 1141 aa8.56□□□□□ -1.04
SCFD1-202ENST00000396629 MED7O43513 233 aa8.56□□□□□ -1.04
SCFD1-202ENST00000396629 PNLIPP16233 465 aa8.56□□□□□ -1.04
SCFD1-202ENST00000396629 SERPINH1P50454 418 aaKnown RBP8.56□□□□□ -1.04
SCFD1-202ENST00000396629 BLKP51451 505 aa8.56□□□□□ -1.04
SCFD1-202ENST00000396629 POLE2P56282 527 aa8.56□□□□□ -1.04
SCFD1-202ENST00000396629 DNM1Q05193 864 aaKnown RBP8.56□□□□□ -1.04
SCFD1-202ENST00000396629 COBLL1Q53SF7 1204 aa8.56□□□□□ -1.04
SCFD1-202ENST00000396629 EFHC1Q5JVL4 640 aa8.56□□□□□ -1.04
SCFD1-202ENST00000396629 ARTNQ5T4W7 220 aa8.56□□□□□ -1.04
SCFD1-202ENST00000396629 ANKRD40Q6AI12 368 aa8.56□□□□□ -1.04
SCFD1-202ENST00000396629 ZNF783Q6ZMS7 281 aa8.56□□□□□ -1.04
SCFD1-202ENST00000396629 KRBA2Q6ZNG9 492 aa8.56□□□□□ -1.04
SCFD1-202ENST00000396629 RRAGAQ7L523 313 aa8.56□□□□□ -1.04
SCFD1-202ENST00000396629 CCNJLQ8IV13 435 aa8.56□□□□□ -1.04
SCFD1-202ENST00000396629 TP53I13Q8NBR0 393 aaPredicted RBP8.56□□□□□ -1.04
SCFD1-202ENST00000396629 GPR156Q8NFN8 814 aa8.56□□□□□ -1.04
SCFD1-202ENST00000396629 OR7D4Q8NG98 312 aa8.56□□□□□ -1.04
SCFD1-202ENST00000396629 ZNF606Q8WXB4 792 aa8.56□□□□□ -1.04
SCFD1-202ENST00000396629 VOPP1Q96AW1 172 aa8.56□□□□□ -1.04
SCFD1-202ENST00000396629 KREMEN1Q96MU8 473 aa8.56□□□□□ -1.04
SCFD1-202ENST00000396629 ARHGEF38Q9NXL2 777 aa8.56□□□□□ -1.04
SCFD1-202ENST00000396629 ITM2BQ9Y287 266 aa8.56□□□□□ -1.04
SCFD1-202ENST00000396629 USP9XQ93008 2570 aaPredicted RBP8.56□□□□□ -1.04
SCFD1-202ENST00000396629 UTP20O75691 2785 aaKnown RBP8.56□□□□□ -1.04
SCFD1-202ENST00000396629 IGLV3-10A0A075B6K4 115 aa8.56□□□□□ -1.04
SCFD1-202ENST00000396629 ILVBLA1L0T0 632 aa8.56□□□□□ -1.04
SCFD1-202ENST00000396629 K7ELQ4 463 aaPredicted RBP8.56□□□□□ -1.04
SCFD1-202ENST00000396629 AREL1O15033 823 aa8.56□□□□□ -1.04
SCFD1-202ENST00000396629 P4HA2O15460 535 aa8.56□□□□□ -1.04
SCFD1-202ENST00000396629 HSF2BPO75031 334 aa8.56□□□□□ -1.04
SCFD1-202ENST00000396629 ADCY5O95622 1261 aa8.56□□□□□ -1.04
SCFD1-202ENST00000396629 PRCPP42785 496 aa8.56□□□□□ -1.04
SCFD1-202ENST00000396629 PEX5P50542 639 aa8.56□□□□□ -1.04
SCFD1-202ENST00000396629 NDUFA8P51970 172 aa8.56□□□□□ -1.04
SCFD1-202ENST00000396629 HK3P52790 923 aa8.56□□□□□ -1.04
SCFD1-202ENST00000396629 MAPK10P53779 464 aa8.56□□□□□ -1.04
SCFD1-202ENST00000396629 NME3Q13232 169 aa8.56□□□□□ -1.04
SCFD1-202ENST00000396629 PDCLQ13371 301 aa8.56□□□□□ -1.04
SCFD1-202ENST00000396629 NCAPHQ15003 741 aa8.56□□□□□ -1.04
SCFD1-202ENST00000396629 ZNF805Q5CZA5 627 aa8.56□□□□□ -1.04
SCFD1-202ENST00000396629 RETSATQ6NUM9 610 aa8.56□□□□□ -1.04
SCFD1-202ENST00000396629 OGFOD3Q6PK18 319 aa8.56□□□□□ -1.04
SCFD1-202ENST00000396629 VPS36Q86VN1 386 aa8.56□□□□□ -1.04
SCFD1-202ENST00000396629 GKN2Q86XP6 184 aa8.56□□□□□ -1.04
SCFD1-202ENST00000396629 SLITRK4Q8IW52 837 aa8.56□□□□□ -1.04
SCFD1-202ENST00000396629 ISG20Q96AZ6 181 aaKnown RBP8.56□□□□□ -1.04
SCFD1-202ENST00000396629 CMKLR1Q99788 373 aa8.56□□□□□ -1.04
SCFD1-202ENST00000396629 TSG101Q99816 390 aa8.56□□□□□ -1.04
SCFD1-202ENST00000396629 ANLNQ9NQW6 1124 aa8.56□□□□□ -1.04
SCFD1-202ENST00000396629 MBNL1Q9NR56 388 aaKnown RBP8.56□□□□□ -1.04
SCFD1-202ENST00000396629 ZNF212Q9UDV6 495 aa8.56□□□□□ -1.04
SCFD1-202ENST00000396629 ANKRD36A6QL64 1941 aa8.55□□□□□ -1.04
SCFD1-202ENST00000396629 CXorf51AA0A1B0GTR3 108 aa8.55□□□□□ -1.04
SCFD1-202ENST00000396629 TMEM110-MUSTN1A8MSY1 372 aa8.55□□□□□ -1.04
SCFD1-202ENST00000396629 I6L893 689 aaPredicted RBP8.55□□□□□ -1.04
SCFD1-202ENST00000396629 NEMP1O14524 444 aa8.55□□□□□ -1.04
SCFD1-202ENST00000396629 RASGRP1O95267 797 aa8.55□□□□□ -1.04
SCFD1-202ENST00000396629 CD160O95971 181 aa8.55□□□□□ -1.04
SCFD1-202ENST00000396629 CTSEP14091 401 aa8.55□□□□□ -1.04
SCFD1-202ENST00000396629 CXCR3P49682 368 aa8.55□□□□□ -1.04
SCFD1-202ENST00000396629 DNA2P51530 1060 aa8.55□□□□□ -1.04
SCFD1-202ENST00000396629 PMS1P54277 932 aaKnown RBP8.55□□□□□ -1.04
SCFD1-202ENST00000396629 ARF5P84085 180 aa8.55□□□□□ -1.04
SCFD1-202ENST00000396629 ALG11Q2TAA5 492 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms