RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 PAICSP22234 425 aaKnown RBP15.78■□□□□ 0.12
GNE-202ENST00000396594 DNAJB1P25685 340 aa15.78■□□□□ 0.12
GNE-202ENST00000396594 GPR1P46091 355 aa15.78■□□□□ 0.12
GNE-202ENST00000396594 GLRBP48167 497 aa15.78■□□□□ 0.12
GNE-202ENST00000396594 SEC24CP53992 1094 aa15.78■□□□□ 0.12
GNE-202ENST00000396594 ITGADQ13349 1161 aa15.78■□□□□ 0.12
GNE-202ENST00000396594 NOMO1Q15155 1222 aa15.78■□□□□ 0.12
GNE-202ENST00000396594 ATP13A4Q4VNC1 1196 aa15.78■□□□□ 0.12
GNE-202ENST00000396594 C11orf96Q7Z7L8 435 aa15.78■□□□□ 0.12
GNE-202ENST00000396594 DDHD1Q8NEL9 900 aa15.78■□□□□ 0.12
GNE-202ENST00000396594 IL1RL2Q9HB29 575 aa15.78■□□□□ 0.12
GNE-202ENST00000396594 LRCH1Q9Y2L9 728 aa15.78■□□□□ 0.12
GNE-202ENST00000396594 SNX13Q9Y5W8 968 aa15.78■□□□□ 0.12
GNE-202ENST00000396594 GALNT4Q8N4A0 578 aa15.77■□□□□ 0.12
GNE-202ENST00000396594 C12orf50Q8NA57 414 aaPredicted RBP15.77■□□□□ 0.12
GNE-202ENST00000396594 C7orf57Q8NEG2 295 aa15.77■□□□□ 0.12
GNE-202ENST00000396594 CCDC28BQ9BUN5 200 aa15.77■□□□□ 0.12
GNE-202ENST00000396594 ROGDIQ9GZN7 287 aa15.77■□□□□ 0.12
GNE-202ENST00000396594 RIBC2Q9H4K1 309 aa15.77■□□□□ 0.12
GNE-202ENST00000396594 ZDHHC6Q9H6R6 413 aa15.77■□□□□ 0.12
GNE-202ENST00000396594 CYP4F12Q9HCS2 524 aa15.77■□□□□ 0.12
GNE-202ENST00000396594 PHPT1Q9NRX4 125 aaPredicted RBP15.77■□□□□ 0.12
GNE-202ENST00000396594 FBXO10Q9UK96 956 aa15.77■□□□□ 0.12
GNE-202ENST00000396594 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.77■□□□□ 0.12
GNE-202ENST00000396594 TBL1XO60907 577 aa15.77■□□□□ 0.12
GNE-202ENST00000396594 MMP8P22894 467 aa15.77■□□□□ 0.12
GNE-202ENST00000396594 HSD17B2P37059 387 aa15.77■□□□□ 0.12
GNE-202ENST00000396594 ASMTP46597 345 aa15.77■□□□□ 0.12
GNE-202ENST00000396594 COPZ1P61923 177 aa15.77■□□□□ 0.12
GNE-202ENST00000396594 BOP1Q14137 746 aaKnown RBP15.77■□□□□ 0.12
GNE-202ENST00000396594 DUPD1Q68J44 220 aa15.77■□□□□ 0.12
GNE-202ENST00000396594 AAGABQ6PD74 315 aa15.77■□□□□ 0.12
GNE-202ENST00000396594 LAYNQ6UX15 382 aa15.77■□□□□ 0.12
GNE-202ENST00000396594 SAMD14Q8IZD0 417 aaPredicted RBP15.77■□□□□ 0.12
GNE-202ENST00000396594 LNX1Q8TBB1 728 aaPredicted RBP15.77■□□□□ 0.12
GNE-202ENST00000396594 NKD2Q969F2 451 aaPredicted RBP15.77■□□□□ 0.12
GNE-202ENST00000396594 SMURF2Q9HAU4 748 aa15.77■□□□□ 0.12
GNE-202ENST00000396594 VPS4AQ9UN37 437 aa15.77■□□□□ 0.12
GNE-202ENST00000396594 SATB2Q9UPW6 733 aa15.77■□□□□ 0.12
GNE-202ENST00000396594 KCNE2Q9Y6J6 123 aa15.77■□□□□ 0.12
GNE-202ENST00000396594 E9PBE3 544 aa15.77■□□□□ 0.11
GNE-202ENST00000396594 MYL12AP19105 171 aa15.77■□□□□ 0.11
GNE-202ENST00000396594 CCDC185Q8N715 623 aa15.77■□□□□ 0.11
GNE-202ENST00000396594 MDM1Q8TC05 714 aa15.77■□□□□ 0.11
GNE-202ENST00000396594 ELMO1Q92556 727 aa15.77■□□□□ 0.11
GNE-202ENST00000396594 MED8Q96G25 268 aa15.77■□□□□ 0.11
GNE-202ENST00000396594 RIPOR3Q96MK2 946 aa15.77■□□□□ 0.11
GNE-202ENST00000396594 RHOJQ9H4E5 214 aa15.77■□□□□ 0.11
GNE-202ENST00000396594 PAPOLBQ9NRJ5 636 aaKnown RBP15.77■□□□□ 0.11
GNE-202ENST00000396594 ANAPC2Q9UJX6 822 aa15.77■□□□□ 0.11
GNE-202ENST00000396594 TIMM13Q9Y5L4 95 aaPredicted RBP15.77■□□□□ 0.11
GNE-202ENST00000396594 NCF1BA6NI72 391 aaPredicted RBP15.77■□□□□ 0.11
GNE-202ENST00000396594 NCF1CA8MVU1 366 aaPredicted RBP15.77■□□□□ 0.11
GNE-202ENST00000396594 DGKIO75912 1065 aa15.77■□□□□ 0.11
GNE-202ENST00000396594 NCF1P14598 390 aaPredicted RBP15.77■□□□□ 0.11
GNE-202ENST00000396594 L1CAMP32004 1257 aa15.77■□□□□ 0.11
GNE-202ENST00000396594 PDK4Q16654 411 aa15.77■□□□□ 0.11
GNE-202ENST00000396594 CAMK1DQ8IU85 385 aa15.77■□□□□ 0.11
GNE-202ENST00000396594 ZNF786Q8N393 782 aa15.77■□□□□ 0.11
GNE-202ENST00000396594 ZNF599Q96NL3 588 aa15.77■□□□□ 0.11
GNE-202ENST00000396594 NTPCRQ9BSD7 190 aaKnown RBP15.77■□□□□ 0.11
GNE-202ENST00000396594 TMEM109Q9BVC6 243 aa15.77■□□□□ 0.11
GNE-202ENST00000396594 RAB11FIP5Q9BXF6 653 aa15.77■□□□□ 0.11
GNE-202ENST00000396594 CCNB1IP1Q9NPC3 277 aa15.77■□□□□ 0.11
GNE-202ENST00000396594 XRN1Q8IZH2 1706 aaKnown RBP15.76■□□□□ 0.11
GNE-202ENST00000396594 LDOC1O95751 146 aaPredicted RBP15.76■□□□□ 0.11
GNE-202ENST00000396594 ZNF682O95780 498 aa15.76■□□□□ 0.11
GNE-202ENST00000396594 ST13P50502 369 aaKnown RBP15.76■□□□□ 0.11
GNE-202ENST00000396594 CDH8P55286 799 aa15.76■□□□□ 0.11
GNE-202ENST00000396594 MRPS15P82914 257 aaKnown RBP15.76■□□□□ 0.11
GNE-202ENST00000396594 BEX3Q00994 111 aa15.76■□□□□ 0.11
GNE-202ENST00000396594 ZC3H12AQ5D1E8 599 aaKnown RBP15.76■□□□□ 0.11
GNE-202ENST00000396594 DNAJB7Q7Z6W7 309 aaPredicted RBP15.76■□□□□ 0.11
GNE-202ENST00000396594 CLP1Q92989 425 aaKnown RBP15.76■□□□□ 0.11
GNE-202ENST00000396594 COPS8Q99627 209 aa15.76■□□□□ 0.11
GNE-202ENST00000396594 PDGFDQ9GZP0 370 aaPredicted RBP15.76■□□□□ 0.11
GNE-202ENST00000396594 SH3BP4Q9P0V3 963 aa15.76■□□□□ 0.11
GNE-202ENST00000396594 DUSP12Q9UNI6 340 aa15.76■□□□□ 0.11
GNE-202ENST00000396594 AVILO75366 819 aa15.76■□□□□ 0.11
GNE-202ENST00000396594 NAA30Q147X3 362 aaPredicted RBP15.76■□□□□ 0.11
GNE-202ENST00000396594 RERGQ96A58 199 aaPredicted RBP15.76■□□□□ 0.11
GNE-202ENST00000396594 MYO19Q96H55 970 aa15.76■□□□□ 0.11
GNE-202ENST00000396594 SPATA17Q96L03 361 aa15.76■□□□□ 0.11
GNE-202ENST00000396594 ADI1Q9BV57 179 aa15.76■□□□□ 0.11
GNE-202ENST00000396594 REEP1Q9H902 201 aa15.76■□□□□ 0.11
GNE-202ENST00000396594 CACNA2D2Q9NY47 1150 aa15.76■□□□□ 0.11
GNE-202ENST00000396594 F8VP50 259 aa15.76■□□□□ 0.11
GNE-202ENST00000396594 TSPAN3O60637 253 aa15.76■□□□□ 0.11
GNE-202ENST00000396594 COX7A2P14406 83 aa15.76■□□□□ 0.11
GNE-202ENST00000396594 PSMB4P28070 264 aa15.76■□□□□ 0.11
GNE-202ENST00000396594 SOX10P56693 466 aa15.76■□□□□ 0.11
GNE-202ENST00000396594 FAAP100Q0VG06 881 aa15.76■□□□□ 0.11
GNE-202ENST00000396594 RAP1GAP2Q684P5 730 aa15.76■□□□□ 0.11
GNE-202ENST00000396594 TRIM40Q6P9F5 258 aa15.76■□□□□ 0.11
GNE-202ENST00000396594 STYXQ8WUJ0 223 aa15.76■□□□□ 0.11
GNE-202ENST00000396594 CDH19Q9H159 772 aa15.76■□□□□ 0.11
GNE-202ENST00000396594 GLOD4Q9HC38 313 aa15.76■□□□□ 0.11
GNE-202ENST00000396594 DDX20Q9UHI6 824 aaKnown RBP15.76■□□□□ 0.11
GNE-202ENST00000396594 CNTNAP1P78357 1384 aa15.76■□□□□ 0.11
GNE-202ENST00000396594 SLC22A2O15244 555 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms