RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 FRMD6Q96NE9 622 aa14.1□□□□□ -0.15
COL4A3-202ENST00000396578 MRPL57Q9BQC6 102 aaKnown RBP14.1□□□□□ -0.15
COL4A3-202ENST00000396578 FBXO10Q9UK96 956 aa14.1□□□□□ -0.15
COL4A3-202ENST00000396578 TFECO14948 347 aaPredicted RBP14.09□□□□□ -0.15
COL4A3-202ENST00000396578 IL18Q14116 193 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 TNFAIP8L3Q5GJ75 292 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 UTS2BQ765I0 119 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 FAIM2Q9BWQ8 316 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 RSPH9Q9H1X1 276 aaPredicted RBP14.09□□□□□ -0.15
COL4A3-202ENST00000396578 PXMP2Q9NR77 195 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 SPG21Q9NZD8 308 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 UNC13BO14795 1591 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.09□□□□□ -0.15
COL4A3-202ENST00000396578 KCNK1O00180 336 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 SLC28A1O00337 649 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 AREL1O15033 823 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 CACNA1FO60840 1977 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 ANXA5P08758 320 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 CCNYL3P0C7X3 344 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 CHRNA5P30532 468 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 CLK3P49761 638 aaKnown RBP14.09□□□□□ -0.15
COL4A3-202ENST00000396578 TOB1P50616 345 aaPredicted RBP14.09□□□□□ -0.15
COL4A3-202ENST00000396578 PTPN5P54829 565 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 DPYSQ14117 519 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 HKDC1Q2TB90 917 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 RD3Q7Z3Z2 195 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 PSTKQ8IV42 348 aaKnown RBP14.09□□□□□ -0.15
COL4A3-202ENST00000396578 RHOBTB2Q9BYZ6 727 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 SLC39A8Q9C0K1 460 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 SENP6Q9GZR1 1112 aaPredicted RBP14.09□□□□□ -0.15
COL4A3-202ENST00000396578 SASH3O75995 380 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 NR2F1P10589 423 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 HOXB6P17509 224 aaKnown RBP14.09□□□□□ -0.15
COL4A3-202ENST00000396578 RPL9P32969 192 aaKnown RBP14.09□□□□□ -0.15
COL4A3-202ENST00000396578 OVOS1Q6IE37 1185 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 PTCD2Q8WV60 388 aaKnown RBP14.09□□□□□ -0.15
COL4A3-202ENST00000396578 OXCT2Q9BYC2 517 aaPredicted RBP14.09□□□□□ -0.15
COL4A3-202ENST00000396578 MORF4L1Q9UBU8 362 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 GIT1Q9Y2X7 761 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 DHRS7Q9Y394 339 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 OR10H3O60404 316 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 TSPAN3O60637 253 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 VBP1P61758 197 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 TROAPQ12815 778 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 TRAPPC5Q8IUR0 188 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 FAR1Q8WVX9 515 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 MBOAT7Q96N66 472 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 ZNF607Q96SK3 696 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 SYT15Q9BQS2 421 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 TDRD1Q9BXT4 1180 aaKnown RBP14.09□□□□□ -0.15
COL4A3-202ENST00000396578 MADDQ8WXG6 1647 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 PCP4L1A6NKN8 68 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 MAGEB3O15480 346 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 TAS2R41P59536 307 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 XIAPP98170 497 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 SCRN3Q0VDG4 424 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 TTMPQ5BVD1 217 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 NKAPQ8N5F7 415 aaKnown RBP14.09□□□□□ -0.15
COL4A3-202ENST00000396578 KBTBD7Q8WVZ9 684 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 KANSL3Q9P2N6 904 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 MICAL3Q7RTP6 2002 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 ARHGEF33A8MVX0 844 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 KRT33AO76009 404 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 IDO1P14902 403 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 LIPMQ5VYY2 423 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 SLCO6A1Q86UG4 719 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 CREG2Q8IUH2 290 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 ZFP14Q9HCL3 533 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 DPP7Q9UHL4 492 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 HACL1Q9UJ83 578 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 SNCAIPQ9Y6H5 919 aa14.09□□□□□ -0.15
COL4A3-202ENST00000396578 ALDH2P05091 517 aa14.08□□□□□ -0.15
COL4A3-202ENST00000396578 PAEPP09466 180 aa14.08□□□□□ -0.15
COL4A3-202ENST00000396578 FCGRTP55899 365 aa14.08□□□□□ -0.15
COL4A3-202ENST00000396578 PDK4Q16654 411 aa14.08□□□□□ -0.15
COL4A3-202ENST00000396578 DNAAF5Q86Y56 855 aa14.08□□□□□ -0.15
COL4A3-202ENST00000396578 KIAA0895Q8NCT3 520 aa14.08□□□□□ -0.15
COL4A3-202ENST00000396578 ATL1Q8WXF7 558 aa14.08□□□□□ -0.15
COL4A3-202ENST00000396578 FNDC11Q9BVV2 318 aa14.08□□□□□ -0.15
COL4A3-202ENST00000396578 TLR10Q9BXR5 811 aa14.08□□□□□ -0.15
COL4A3-202ENST00000396578 SLC4A5Q9BY07 1137 aa14.08□□□□□ -0.15
COL4A3-202ENST00000396578 CKLFQ9UBR5 152 aa14.08□□□□□ -0.15
COL4A3-202ENST00000396578 EFR3BQ9Y2G0 817 aa14.08□□□□□ -0.15
COL4A3-202ENST00000396578 ZMYM2Q9UBW7 1377 aa14.08□□□□□ -0.15
COL4A3-202ENST00000396578 LYNP07948 512 aa14.08□□□□□ -0.16
COL4A3-202ENST00000396578 PRKAR2AP13861 404 aaKnown RBP14.08□□□□□ -0.16
COL4A3-202ENST00000396578 SLC6A2P23975 617 aa14.08□□□□□ -0.16
COL4A3-202ENST00000396578 KCNJ2P63252 427 aa14.08□□□□□ -0.16
COL4A3-202ENST00000396578 ARL10Q8N8L6 244 aa14.08□□□□□ -0.16
COL4A3-202ENST00000396578 ITCHQ96J02 903 aa14.08□□□□□ -0.16
COL4A3-202ENST00000396578 TCF12Q99081 682 aa14.08□□□□□ -0.16
COL4A3-202ENST00000396578 CHCHD6Q9BRQ6 235 aa14.08□□□□□ -0.16
COL4A3-202ENST00000396578 ZNF221Q9UK13 617 aa14.08□□□□□ -0.16
COL4A3-202ENST00000396578 SETBP1Q9Y6X0 1596 aa14.08□□□□□ -0.16
COL4A3-202ENST00000396578 GAKO14976 1311 aa14.08□□□□□ -0.16
COL4A3-202ENST00000396578 RLN1P04808 185 aa14.08□□□□□ -0.16
COL4A3-202ENST00000396578 MIPP30301 263 aa14.08□□□□□ -0.16
COL4A3-202ENST00000396578 C4orf19Q8IY42 314 aa14.08□□□□□ -0.16
COL4A3-202ENST00000396578 TCAIMQ8N3R3 496 aa14.08□□□□□ -0.16
COL4A3-202ENST00000396578 MCFD2Q8NI22 146 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms