RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 YY1AP1Q9H869 796 aa11.68□□□□□ -0.54
PDXDC1-202ENST00000396410 NDFIP2Q9NV92 336 aa11.68□□□□□ -0.54
PDXDC1-202ENST00000396410 UXTQ9UBK9 157 aaPredicted RBP11.68□□□□□ -0.54
PDXDC1-202ENST00000396410 NT5C1B-RDH14C9J2C7 533 aa11.68□□□□□ -0.54
PDXDC1-202ENST00000396410 BUD23O43709 281 aaKnown RBP11.68□□□□□ -0.54
PDXDC1-202ENST00000396410 SMIM24O75264 130 aa11.68□□□□□ -0.54
PDXDC1-202ENST00000396410 FKBP6O75344 327 aa11.68□□□□□ -0.54
PDXDC1-202ENST00000396410 UPP2O95045 317 aa11.68□□□□□ -0.54
PDXDC1-202ENST00000396410 COL6A2P12110 1019 aa11.68□□□□□ -0.54
PDXDC1-202ENST00000396410 GM2AP17900 193 aa11.68□□□□□ -0.54
PDXDC1-202ENST00000396410 PLK1P53350 603 aa11.68□□□□□ -0.54
PDXDC1-202ENST00000396410 STX1BP61266 288 aa11.68□□□□□ -0.54
PDXDC1-202ENST00000396410 POU4F1Q01851 419 aa11.68□□□□□ -0.54
PDXDC1-202ENST00000396410 PEX6Q13608 980 aa11.68□□□□□ -0.54
PDXDC1-202ENST00000396410 SLC9B1Q4ZJI4 515 aa11.68□□□□□ -0.54
PDXDC1-202ENST00000396410 RABGAP1LQ5R372 815 aa11.68□□□□□ -0.54
PDXDC1-202ENST00000396410 SCD5Q86SK9 330 aa11.68□□□□□ -0.54
PDXDC1-202ENST00000396410 CIR1Q86X95 450 aaPredicted RBP11.68□□□□□ -0.54
PDXDC1-202ENST00000396410 SNX32Q86XE0 403 aa11.68□□□□□ -0.54
PDXDC1-202ENST00000396410 LGI2Q8N0V4 545 aa11.68□□□□□ -0.54
PDXDC1-202ENST00000396410 EFCAB3Q8N7B9 438 aa11.68□□□□□ -0.54
PDXDC1-202ENST00000396410 FAM136AQ96C01 138 aa11.68□□□□□ -0.54
PDXDC1-202ENST00000396410 TMA16Q96EY4 203 aaKnown RBP11.68□□□□□ -0.54
PDXDC1-202ENST00000396410 OXCT2Q9BYC2 517 aaPredicted RBP11.68□□□□□ -0.54
PDXDC1-202ENST00000396410 NMRK1Q9NWW6 199 aa11.68□□□□□ -0.54
PDXDC1-202ENST00000396410 DNAJB4Q9UDY4 337 aa11.68□□□□□ -0.54
PDXDC1-202ENST00000396410 SCML2Q9UQR0 700 aa11.68□□□□□ -0.54
PDXDC1-202ENST00000396410 H7C4K7 107 aa11.68□□□□□ -0.54
PDXDC1-202ENST00000396410 GIPC1O14908 333 aa11.68□□□□□ -0.54
PDXDC1-202ENST00000396410 ADAMTS4O75173 837 aa11.68□□□□□ -0.54
PDXDC1-202ENST00000396410 RBP1P09455 135 aa11.68□□□□□ -0.54
PDXDC1-202ENST00000396410 CCDC166P0CW27 439 aa11.68□□□□□ -0.54
PDXDC1-202ENST00000396410 AOC1P19801 751 aa11.68□□□□□ -0.54
PDXDC1-202ENST00000396410 GRAMD1BQ3KR37 738 aa11.68□□□□□ -0.54
PDXDC1-202ENST00000396410 SETD3Q86TU7 594 aaPredicted RBP11.68□□□□□ -0.54
PDXDC1-202ENST00000396410 ENDOVQ8N8Q3 282 aaKnown RBP11.68□□□□□ -0.54
PDXDC1-202ENST00000396410 FBXO27Q8NI29 283 aa11.68□□□□□ -0.54
PDXDC1-202ENST00000396410 CCDC126Q96EE4 140 aa11.68□□□□□ -0.54
PDXDC1-202ENST00000396410 ZNF570Q96NI8 536 aa11.68□□□□□ -0.54
PDXDC1-202ENST00000396410 MRPL57Q9BQC6 102 aaKnown RBP11.68□□□□□ -0.54
PDXDC1-202ENST00000396410 POLR1EQ9GZS1 481 aaKnown RBP11.68□□□□□ -0.54
PDXDC1-202ENST00000396410 UPF3AQ9H1J1 476 aaKnown RBP11.68□□□□□ -0.54
PDXDC1-202ENST00000396410 CRYL1Q9Y2S2 319 aa11.68□□□□□ -0.54
PDXDC1-202ENST00000396410 J3KR12 359 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 PFDN6O15212 129 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 GLP2RO95838 553 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 NDST2P52849 883 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 SLC10A7Q0GE19 358 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 PDAP1Q13442 181 aaKnown RBP11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 LAMB3Q13751 1172 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 RPS6KA2Q15349 733 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 RALGPS1Q5JS13 557 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 ARHGAP12Q8IWW6 846 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 MOCOSQ96EN8 888 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 IL12RB2Q99665 862 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 SEMA3CQ99985 751 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 VPS45Q9NRW7 570 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 STX18Q9P2W9 335 aaKnown RBP11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 RALGAPA2Q2PPJ7 1873 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 TTC24A2A3L6 582 aaPredicted RBP11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 CAPN14A8MX76 684 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 SUPT7LO94864 414 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 IRF1P10914 325 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 ATP6V1C1P21283 382 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 PSEN1P49768 467 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 TAS2R39P59534 338 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 KLF10Q13118 480 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 CAPRIN2Q6IMN6 1127 aaKnown RBP11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 MRNIPQ6NTE8 343 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 BEND5Q7L4P6 421 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 SCML4Q8N228 414 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 PYDC1Q8WXC3 89 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 MARK4Q96L34 752 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 CINPQ9BW66 212 aaPredicted RBP11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.67□□□□□ -0.544e-6■□□□□ 9.4
PDXDC1-202ENST00000396410 ZCWPW1Q9H0M4 648 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 RGS18Q9NS28 235 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 ADA2Q9NZK5 511 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 SLC7A8Q9UHI5 535 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 OR6C75A6NL08 312 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 F8W8V4 182 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 CCL22O00626 93 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 SYN3O14994 580 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 ACADSP16219 412 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 CTGFP29279 349 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 SLC11A2P49281 568 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 HDAC10Q969S8 669 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 SPDL1Q96EA4 605 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 TBKBP1A7MCY6 615 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 TLR5O60602 858 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 CNTN5O94779 1100 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 SERPINF2P08697 491 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 HNRNPLP14866 589 aaKnown RBP eCLIP11.67□□□□□ -0.541e-6■■■□□ 15.2
PDXDC1-202ENST00000396410 ANPEPP15144 967 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 TFEBP19484 476 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 ATP5F1P24539 256 aaPredicted RBP11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 POLD2P49005 469 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 CLCN5P51795 746 aa11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 ATXN3P54252 364 aaPredicted RBP11.67□□□□□ -0.54
PDXDC1-202ENST00000396410 DUSP4Q13115 394 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms