RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 TXNDC11Q6PKC3 985 aa17.5■□□□□ 0.39
UBFD1-201ENST00000395878 IL31RAQ8NI17 732 aa17.5■□□□□ 0.39
UBFD1-201ENST00000395878 SUSD6Q92537 303 aa17.5■□□□□ 0.39
UBFD1-201ENST00000395878 FHDC1Q9C0D6 1143 aaPredicted RBP17.5■□□□□ 0.39
UBFD1-201ENST00000395878 MRPL17Q9NRX2 175 aaKnown RBP17.5■□□□□ 0.39
UBFD1-201ENST00000395878 PPLO60437 1756 aa17.5■□□□□ 0.39
UBFD1-201ENST00000395878 SLC15A5A6NIM6 579 aa17.5■□□□□ 0.39
UBFD1-201ENST00000395878 BANF1O75531 89 aa17.5■□□□□ 0.39
UBFD1-201ENST00000395878 ERCC2P18074 760 aa17.5■□□□□ 0.39
UBFD1-201ENST00000395878 JAK1P23458 1154 aa17.5■□□□□ 0.39
UBFD1-201ENST00000395878 MRPS5P82675 430 aaKnown RBP17.5■□□□□ 0.39
UBFD1-201ENST00000395878 CCDC149Q6ZUS6 474 aa17.5■□□□□ 0.39
UBFD1-201ENST00000395878 CERS5Q8N5B7 392 aa17.5■□□□□ 0.39
UBFD1-201ENST00000395878 SEMA3CQ99985 751 aa17.5■□□□□ 0.39
UBFD1-201ENST00000395878 REXO4Q9GZR2 422 aaKnown RBP17.5■□□□□ 0.39
UBFD1-201ENST00000395878 VPS45Q9NRW7 570 aa17.5■□□□□ 0.39
UBFD1-201ENST00000395878 ATP6V0D1P61421 351 aa17.5■□□□□ 0.39
UBFD1-201ENST00000395878 HSPA14Q0VDF9 509 aa17.5■□□□□ 0.39
UBFD1-201ENST00000395878 TPGS1Q6ZTW0 290 aa17.5■□□□□ 0.39
UBFD1-201ENST00000395878 DHDDSQ86SQ9 333 aa17.5■□□□□ 0.39
UBFD1-201ENST00000395878 MAGEE2Q8TD90 523 aaPredicted RBP17.5■□□□□ 0.39
UBFD1-201ENST00000395878 SLITRK2Q9H156 845 aa17.5■□□□□ 0.39
UBFD1-201ENST00000395878 HMG20AQ9NP66 347 aa17.5■□□□□ 0.39
UBFD1-201ENST00000395878 ULK1O75385 1050 aa17.5■□□□□ 0.39
UBFD1-201ENST00000395878 PBX1P40424 430 aa17.5■□□□□ 0.39
UBFD1-201ENST00000395878 MAPKAPK3Q16644 382 aa17.5■□□□□ 0.39
UBFD1-201ENST00000395878 ZNF549Q6P9A3 640 aa17.5■□□□□ 0.39
UBFD1-201ENST00000395878 FNIP1Q8TF40 1166 aa17.5■□□□□ 0.39
UBFD1-201ENST00000395878 MARK4Q96L34 752 aa17.5■□□□□ 0.39
UBFD1-201ENST00000395878 GRIP2Q9C0E4 1043 aa17.5■□□□□ 0.39
UBFD1-201ENST00000395878 ATP13A3Q9H7F0 1226 aa17.5■□□□□ 0.39
UBFD1-201ENST00000395878 RNF19AQ9NV58 838 aa17.5■□□□□ 0.39
UBFD1-201ENST00000395878 ATP6V1HQ9UI12 483 aa17.5■□□□□ 0.39
UBFD1-201ENST00000395878 EFCAB10A6NFE3 127 aa17.49■□□□□ 0.39
UBFD1-201ENST00000395878 SLC28A1O00337 649 aa17.49■□□□□ 0.39
UBFD1-201ENST00000395878 QSOX1O00391 747 aa17.49■□□□□ 0.39
UBFD1-201ENST00000395878 FGFR3P22607 806 aa17.49■□□□□ 0.39
UBFD1-201ENST00000395878 HIRAP54198 1017 aaPredicted RBP17.49■□□□□ 0.39
UBFD1-201ENST00000395878 CDC42P60953 191 aa17.49■□□□□ 0.39
UBFD1-201ENST00000395878 INSCQ1MX18 579 aa17.49■□□□□ 0.39
UBFD1-201ENST00000395878 NAIF1Q69YI7 327 aaPredicted RBP17.49■□□□□ 0.39
UBFD1-201ENST00000395878 ADAMTSL2Q86TH1 951 aa17.49■□□□□ 0.39
UBFD1-201ENST00000395878 ENKURQ8TC29 256 aa17.49■□□□□ 0.39
UBFD1-201ENST00000395878 TMEM131LA2VDJ0 1609 aa17.49■□□□□ 0.39
UBFD1-201ENST00000395878 NDUFB5O43674 189 aa17.49■□□□□ 0.39
UBFD1-201ENST00000395878 SH3BGRLO75368 114 aa17.49■□□□□ 0.39
UBFD1-201ENST00000395878 FGRP09769 529 aa17.49■□□□□ 0.39
UBFD1-201ENST00000395878 FLT3P36888 993 aa17.49■□□□□ 0.39
UBFD1-201ENST00000395878 RPL3P39023 403 aaKnown RBP17.49■□□□□ 0.39
UBFD1-201ENST00000395878 CRATP43155 626 aa17.49■□□□□ 0.39
UBFD1-201ENST00000395878 IKBKEQ14164 716 aa17.49■□□□□ 0.39
UBFD1-201ENST00000395878 ZNF57Q68EA5 555 aaPredicted RBP17.49■□□□□ 0.39
UBFD1-201ENST00000395878 TOP6BLQ8N6T0 577 aa17.49■□□□□ 0.39
UBFD1-201ENST00000395878 POP5Q969H6 163 aaKnown RBP17.49■□□□□ 0.39
UBFD1-201ENST00000395878 LGMNQ99538 433 aa17.49■□□□□ 0.39
UBFD1-201ENST00000395878 CNGB3Q9NQW8 809 aa17.49■□□□□ 0.39
UBFD1-201ENST00000395878 KLHL1Q9NR64 748 aa17.49■□□□□ 0.39
UBFD1-201ENST00000395878 CORO2BQ9UQ03 480 aa17.49■□□□□ 0.39
UBFD1-201ENST00000395878 MROH1Q8NDA8 1641 aa17.49■□□□□ 0.39
UBFD1-201ENST00000395878 TCRBV9S1A1TA0A576 114 aa17.49■□□□□ 0.39
UBFD1-201ENST00000395878 STX11O75558 287 aa17.49■□□□□ 0.39
UBFD1-201ENST00000395878 PTDSS1P48651 473 aaKnown RBP17.49■□□□□ 0.39
UBFD1-201ENST00000395878 SPIDRQ14159 915 aa17.49■□□□□ 0.39
UBFD1-201ENST00000395878 PTPRNQ16849 979 aa17.49■□□□□ 0.39
UBFD1-201ENST00000395878 B3GNT6Q6ZMB0 384 aa17.49■□□□□ 0.39
UBFD1-201ENST00000395878 TTC7BQ86TV6 843 aa17.49■□□□□ 0.39
UBFD1-201ENST00000395878 TRABD2AQ86V40 505 aa17.49■□□□□ 0.39
UBFD1-201ENST00000395878 C1orf50Q9BV19 199 aa17.49■□□□□ 0.39
UBFD1-201ENST00000395878 LHX5Q9H2C1 402 aa17.49■□□□□ 0.39
UBFD1-201ENST00000395878 PSME2Q9UL46 239 aa17.49■□□□□ 0.39
UBFD1-201ENST00000395878 TRAV19A0A0A6YYK7 116 aa17.49■□□□□ 0.39
UBFD1-201ENST00000395878 BUD23O43709 281 aaKnown RBP17.49■□□□□ 0.39
UBFD1-201ENST00000395878 MAGEC1O60732 1142 aa17.49■□□□□ 0.39
UBFD1-201ENST00000395878 CSH1P0DML2 217 aa17.49■□□□□ 0.39
UBFD1-201ENST00000395878 CSH2P0DML3 217 aa17.49■□□□□ 0.39
UBFD1-201ENST00000395878 ALOX12P18054 663 aa17.49■□□□□ 0.39
UBFD1-201ENST00000395878 ATP6V1C1P21283 382 aa17.49■□□□□ 0.39
UBFD1-201ENST00000395878 CES1P23141 567 aa17.49■□□□□ 0.39
UBFD1-201ENST00000395878 POLD2P49005 469 aa17.49■□□□□ 0.39
UBFD1-201ENST00000395878 C11orf88Q6PI97 169 aa17.49■□□□□ 0.39
UBFD1-201ENST00000395878 POTEHQ6S545 545 aa17.49■□□□□ 0.39
UBFD1-201ENST00000395878 GPRIN3Q6ZVF9 776 aa17.49■□□□□ 0.39
UBFD1-201ENST00000395878 GATAD2AQ86YP4 633 aa17.49■□□□□ 0.39
UBFD1-201ENST00000395878 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.49■□□□□ 0.39
UBFD1-201ENST00000395878 SNX15Q9NRS6 342 aa17.49■□□□□ 0.39
UBFD1-201ENST00000395878 H0YC42 278 aa17.48■□□□□ 0.39
UBFD1-201ENST00000395878 ABL2P42684 1182 aa17.48■□□□□ 0.39
UBFD1-201ENST00000395878 NDNQ99608 321 aa17.48■□□□□ 0.39
UBFD1-201ENST00000395878 FBXO10Q9UK96 956 aa17.48■□□□□ 0.39
UBFD1-201ENST00000395878 DERAQ9Y315 318 aa17.48■□□□□ 0.39
UBFD1-201ENST00000395878 TRIM43BA6NCK2 446 aa17.48■□□□□ 0.39
UBFD1-201ENST00000395878 CRYBB1P53674 252 aaPredicted RBP17.48■□□□□ 0.39
UBFD1-201ENST00000395878 TAF5Q15542 800 aa17.48■□□□□ 0.39
UBFD1-201ENST00000395878 CXCL17Q6UXB2 119 aa17.48■□□□□ 0.39
UBFD1-201ENST00000395878 ULK2Q8IYT8 1036 aa17.48■□□□□ 0.39
UBFD1-201ENST00000395878 DUSP16Q9BY84 665 aa17.48■□□□□ 0.39
UBFD1-201ENST00000395878 FBXO5Q9UKT4 447 aa17.48■□□□□ 0.39
UBFD1-201ENST00000395878 TMEM191CA6NGB0 347 aa17.48■□□□□ 0.39
UBFD1-201ENST00000395878 OTCP00480 354 aa17.48■□□□□ 0.39
UBFD1-201ENST00000395878 KCNJ2P63252 427 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms