RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 CA4P22748 312 aa15.33■□□□□ 0.04
SCAF11-204ENST00000395454 RPA3P35244 121 aaPredicted RBP15.33■□□□□ 0.04
SCAF11-204ENST00000395454 CCNFP41002 786 aa15.33■□□□□ 0.04
SCAF11-204ENST00000395454 IL9RQ01113 521 aa15.33■□□□□ 0.04
SCAF11-204ENST00000395454 FCHO2Q0JRZ9 810 aa15.33■□□□□ 0.04
SCAF11-204ENST00000395454 SPARCL1Q14515 664 aa15.33■□□□□ 0.04
SCAF11-204ENST00000395454 SPANXN3Q5MJ09 141 aa15.33■□□□□ 0.04
SCAF11-204ENST00000395454 TIFABQ6ZNK6 161 aa15.33■□□□□ 0.04
SCAF11-204ENST00000395454 TPGS1Q6ZTW0 290 aa15.33■□□□□ 0.04
SCAF11-204ENST00000395454 CPLX4Q7Z7G2 160 aa15.33■□□□□ 0.04
SCAF11-204ENST00000395454 ADHFE1Q8IWW8 467 aa15.33■□□□□ 0.04
SCAF11-204ENST00000395454 PPM1NQ8N819 430 aa15.33■□□□□ 0.04
SCAF11-204ENST00000395454 MGARPQ8TDB4 240 aa15.33■□□□□ 0.04
SCAF11-204ENST00000395454 DYDC1Q8WWB3 177 aa15.33■□□□□ 0.04
SCAF11-204ENST00000395454 MRRFQ96E11 262 aaKnown RBP15.33■□□□□ 0.04
SCAF11-204ENST00000395454 ASIC4Q96FT7 647 aa15.33■□□□□ 0.04
SCAF11-204ENST00000395454 SEC16BQ96JE7 1060 aa15.33■□□□□ 0.04
SCAF11-204ENST00000395454 DDX50Q9BQ39 737 aaKnown RBP15.33■□□□□ 0.04
SCAF11-204ENST00000395454 TRMT61BQ9BVS5 477 aaKnown RBP15.33■□□□□ 0.04
SCAF11-204ENST00000395454 NSRP1Q9H0G5 558 aaKnown RBP15.33■□□□□ 0.04
SCAF11-204ENST00000395454 EBF3Q9H4W6 596 aa15.33■□□□□ 0.04
SCAF11-204ENST00000395454 MPP6Q9NZW5 540 aa15.33■□□□□ 0.04
SCAF11-204ENST00000395454 STOML2Q9UJZ1 356 aa15.33■□□□□ 0.04
SCAF11-204ENST00000395454 AAR2Q9Y312 384 aaKnown RBP15.33■□□□□ 0.04
SCAF11-204ENST00000395454 TSPAN3O60637 253 aa15.32■□□□□ 0.04
SCAF11-204ENST00000395454 SPAG7O75391 227 aa15.32■□□□□ 0.04
SCAF11-204ENST00000395454 DHRS4L1P0CG22 281 aa15.32■□□□□ 0.04
SCAF11-204ENST00000395454 GDI1P31150 447 aa15.32■□□□□ 0.04
SCAF11-204ENST00000395454 NPY2RP49146 381 aa15.32■□□□□ 0.04
SCAF11-204ENST00000395454 NEK3P51956 506 aa15.32■□□□□ 0.04
SCAF11-204ENST00000395454 SESN2P58004 480 aaPredicted RBP15.32■□□□□ 0.04
SCAF11-204ENST00000395454 DNAJC3Q13217 504 aa15.32■□□□□ 0.04
SCAF11-204ENST00000395454 PRPSAP1Q14558 356 aa15.32■□□□□ 0.04
SCAF11-204ENST00000395454 PDK4Q16654 411 aa15.32■□□□□ 0.04
SCAF11-204ENST00000395454 LGSNQ5TDP6 509 aa15.32■□□□□ 0.04
SCAF11-204ENST00000395454 NAPEPLDQ6IQ20 393 aa15.32■□□□□ 0.04
SCAF11-204ENST00000395454 FBXL22Q6P050 247 aa15.32■□□□□ 0.04
SCAF11-204ENST00000395454 LINC00523Q86TU6 105 aa15.32■□□□□ 0.04
SCAF11-204ENST00000395454 LGI2Q8N0V4 545 aa15.32■□□□□ 0.04
SCAF11-204ENST00000395454 OR52K1Q8NGK4 314 aa15.32■□□□□ 0.04
SCAF11-204ENST00000395454 APOPT1Q96IL0 206 aa15.32■□□□□ 0.04
SCAF11-204ENST00000395454 SERAC1Q96JX3 654 aa15.32■□□□□ 0.04
SCAF11-204ENST00000395454 RPRD1AQ96P16 312 aaPredicted RBP15.32■□□□□ 0.04
SCAF11-204ENST00000395454 GLOD4Q9HC38 313 aa15.32■□□□□ 0.04
SCAF11-204ENST00000395454 FAM237BA0A1B0GVD1 139 aa15.31■□□□□ 0.04
SCAF11-204ENST00000395454 MAGEB16A2A368 324 aa15.31■□□□□ 0.04
SCAF11-204ENST00000395454 HMX2A2RU54 273 aa15.31■□□□□ 0.04
SCAF11-204ENST00000395454 LOC730098B7Z3J9 87 aa15.31■□□□□ 0.04
SCAF11-204ENST00000395454 F5H423 210 aaPredicted RBP15.31■□□□□ 0.04
SCAF11-204ENST00000395454 ANXA9O76027 345 aa15.31■□□□□ 0.04
SCAF11-204ENST00000395454 USP1O94782 785 aa15.31■□□□□ 0.04
SCAF11-204ENST00000395454 MT-ND3P03897 115 aa15.31■□□□□ 0.04
SCAF11-204ENST00000395454 POLBP06746 335 aa15.31■□□□□ 0.04
SCAF11-204ENST00000395454 TAC1P20366 129 aa15.31■□□□□ 0.04
SCAF11-204ENST00000395454 PAPOLAP51003 745 aaKnown RBP15.31■□□□□ 0.04
SCAF11-204ENST00000395454 ZP2Q05996 745 aa15.31■□□□□ 0.04
SCAF11-204ENST00000395454 HNRNPDQ14103 355 aaKnown RBP15.31■□□□□ 0.04
SCAF11-204ENST00000395454 ITIH4Q14624 930 aa15.31■□□□□ 0.04
SCAF11-204ENST00000395454 ANO4Q32M45 955 aa15.31■□□□□ 0.04
SCAF11-204ENST00000395454 ALFQ53S48 1182 aa15.31■□□□□ 0.04
SCAF11-204ENST00000395454 MICALCLQ6ZW33 695 aa15.31■□□□□ 0.04
SCAF11-204ENST00000395454 ADGRG2Q8IZP9 1017 aa15.31■□□□□ 0.04
SCAF11-204ENST00000395454 CACNA2D3Q8IZS8 1091 aa15.31■□□□□ 0.04
SCAF11-204ENST00000395454 OTUB2Q96DC9 234 aa15.31■□□□□ 0.04
SCAF11-204ENST00000395454 ASB2Q96Q27 587 aa15.31■□□□□ 0.04
SCAF11-204ENST00000395454 FAM83CQ9BQN1 747 aa15.31■□□□□ 0.04
SCAF11-204ENST00000395454 IL22Q9GZX6 179 aa15.31■□□□□ 0.04
SCAF11-204ENST00000395454 FAM107BQ9H098 131 aa15.31■□□□□ 0.04
SCAF11-204ENST00000395454 BFARQ9NZS9 450 aa15.31■□□□□ 0.04
SCAF11-204ENST00000395454 PRKAG3Q9UGI9 489 aa15.31■□□□□ 0.04
SCAF11-204ENST00000395454 IPO11Q9UI26 975 aaKnown RBP15.31■□□□□ 0.04
SCAF11-204ENST00000395454 KRT38O76015 456 aa15.31■□□□□ 0.04
SCAF11-204ENST00000395454 FOXN2P32314 431 aa15.31■□□□□ 0.04
SCAF11-204ENST00000395454 ADRA1AP35348 466 aa15.31■□□□□ 0.04
SCAF11-204ENST00000395454 ETV4P43268 484 aa15.31■□□□□ 0.04
SCAF11-204ENST00000395454 MAPKAPK2P49137 400 aa15.31■□□□□ 0.04
SCAF11-204ENST00000395454 CRADDP78560 199 aa15.31■□□□□ 0.04
SCAF11-204ENST00000395454 SLC1A5Q15758 541 aa15.31■□□□□ 0.04
SCAF11-204ENST00000395454 EML3Q32P44 896 aa15.31■□□□□ 0.04
SCAF11-204ENST00000395454 CTAGE3PQ8IX95 158 aa15.31■□□□□ 0.04
SCAF11-204ENST00000395454 FAM217AQ8IXS0 508 aa15.31■□□□□ 0.04
SCAF11-204ENST00000395454 CFAP52Q8N1V2 620 aa15.31■□□□□ 0.04
SCAF11-204ENST00000395454 CPXM2Q8N436 756 aa15.31■□□□□ 0.04
SCAF11-204ENST00000395454 TEX26Q8N6G2 289 aa15.31■□□□□ 0.04
SCAF11-204ENST00000395454 KIAA1958Q8N8K9 716 aa15.31■□□□□ 0.04
SCAF11-204ENST00000395454 DDI1Q8WTU0 396 aa15.31■□□□□ 0.04
SCAF11-204ENST00000395454 ATP2A3Q93084 1043 aa15.31■□□□□ 0.04
SCAF11-204ENST00000395454 IGSF8Q969P0 613 aa15.31■□□□□ 0.04
SCAF11-204ENST00000395454 NXPE3Q969Y0 559 aa15.31■□□□□ 0.04
SCAF11-204ENST00000395454 MYEOVQ96EZ4 313 aa15.31■□□□□ 0.04
SCAF11-204ENST00000395454 PRICKLE1Q96MT3 831 aaPredicted RBP15.31■□□□□ 0.04
SCAF11-204ENST00000395454 BRD9Q9H8M2 597 aa15.31■□□□□ 0.04
SCAF11-204ENST00000395454 MLXIPLQ9NP71 852 aa15.31■□□□□ 0.04
SCAF11-204ENST00000395454 PLK2Q9NYY3 685 aa15.31■□□□□ 0.04
SCAF11-204ENST00000395454 GRID1Q9ULK0 1009 aa15.31■□□□□ 0.04
SCAF11-204ENST00000395454 ZCWPW2A0A1B0GU75 182 aa15.3■□□□□ 0.04
SCAF11-204ENST00000395454 TYW5A2RUC4 315 aaKnown RBP15.3■□□□□ 0.04
SCAF11-204ENST00000395454 TCP11X1B4DZS4 312 aa15.3■□□□□ 0.04
SCAF11-204ENST00000395454 TRIM49D1C9J1S8 452 aa15.3■□□□□ 0.04
SCAF11-204ENST00000395454 SNX3O60493 162 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms