RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 MAGEH1Q9H213 219 aa19.56■□□□□ 0.72
LMNB1-202ENST00000395354 PPANQ9NQ55 473 aaKnown RBP19.56■□□□□ 0.72
LMNB1-202ENST00000395354 SHROOM3Q8TF72 1996 aa19.55■□□□□ 0.72
LMNB1-202ENST00000395354 CLDN11O75508 207 aa19.55■□□□□ 0.72
LMNB1-202ENST00000395354 KRT37O76014 449 aa19.55■□□□□ 0.72
LMNB1-202ENST00000395354 FAM107AO95990 144 aa19.55■□□□□ 0.72
LMNB1-202ENST00000395354 CNTFP26441 200 aa19.55■□□□□ 0.72
LMNB1-202ENST00000395354 GDI1P31150 447 aa19.55■□□□□ 0.72
LMNB1-202ENST00000395354 ZP2Q05996 745 aa19.55■□□□□ 0.72
LMNB1-202ENST00000395354 MPP3Q13368 585 aa19.55■□□□□ 0.72
LMNB1-202ENST00000395354 CRYMQ14894 314 aa19.55■□□□□ 0.72
LMNB1-202ENST00000395354 PDGFRLQ15198 375 aa19.55■□□□□ 0.72
LMNB1-202ENST00000395354 TRIM68Q6AZZ1 485 aa19.55■□□□□ 0.72
LMNB1-202ENST00000395354 TMEM135Q86UB9 458 aa19.55■□□□□ 0.72
LMNB1-202ENST00000395354 CTAGE3PQ8IX95 158 aa19.55■□□□□ 0.72
LMNB1-202ENST00000395354 CPXM2Q8N436 756 aa19.55■□□□□ 0.72
LMNB1-202ENST00000395354 SLC44A3Q8N4M1 653 aa19.55■□□□□ 0.72
LMNB1-202ENST00000395354 CDKL2Q92772 493 aa19.55■□□□□ 0.72
LMNB1-202ENST00000395354 MTBPQ96DY7 904 aa19.55■□□□□ 0.72
LMNB1-202ENST00000395354 ASIC4Q96FT7 647 aa19.55■□□□□ 0.72
LMNB1-202ENST00000395354 FAM237BA0A1B0GVD1 139 aa19.54■□□□□ 0.72
LMNB1-202ENST00000395354 FOXO6A8MYZ6 492 aa19.54■□□□□ 0.72
LMNB1-202ENST00000395354 TSPAN3O60637 253 aa19.54■□□□□ 0.72
LMNB1-202ENST00000395354 USP1O94782 785 aa19.54■□□□□ 0.72
LMNB1-202ENST00000395354 ASGR2P07307 311 aa19.54■□□□□ 0.72
LMNB1-202ENST00000395354 ZSCAN26Q16670 478 aa19.54■□□□□ 0.72
LMNB1-202ENST00000395354 EML3Q32P44 896 aa19.54■□□□□ 0.72
LMNB1-202ENST00000395354 TPGS1Q6ZTW0 290 aa19.54■□□□□ 0.72
LMNB1-202ENST00000395354 MARK2Q7KZI7 788 aaKnown RBP19.54■□□□□ 0.72
LMNB1-202ENST00000395354 TMA16Q96EY4 203 aaKnown RBP19.54■□□□□ 0.72
LMNB1-202ENST00000395354 MYEOVQ96EZ4 313 aa19.54■□□□□ 0.72
LMNB1-202ENST00000395354 ZNF419Q96HQ0 510 aaPredicted RBP19.54■□□□□ 0.72
LMNB1-202ENST00000395354 TBL1YQ9BQ87 522 aa19.54■□□□□ 0.72
LMNB1-202ENST00000395354 EBF3Q9H4W6 596 aa19.54■□□□□ 0.72
LMNB1-202ENST00000395354 VPS45Q9NRW7 570 aa19.54■□□□□ 0.72
LMNB1-202ENST00000395354 HAUS2Q9NVX0 235 aa19.54■□□□□ 0.72
LMNB1-202ENST00000395354 MYO18AQ92614 2054 aaKnown RBP19.54■□□□□ 0.72
LMNB1-202ENST00000395354 A0A1W2PPM1 405 aa19.53■□□□□ 0.72
LMNB1-202ENST00000395354 CXorf49A8MYA2 514 aaPredicted RBP19.53■□□□□ 0.72
LMNB1-202ENST00000395354 J3KR12 359 aa19.53■□□□□ 0.72
LMNB1-202ENST00000395354 TYROBPO43914 113 aa19.53■□□□□ 0.72
LMNB1-202ENST00000395354 PRAMEF11O60813 436 aa19.53■□□□□ 0.72
LMNB1-202ENST00000395354 KRT38O76015 456 aa19.53■□□□□ 0.72
LMNB1-202ENST00000395354 MT-ND3P03897 115 aa19.53■□□□□ 0.72
LMNB1-202ENST00000395354 SNRPAP09012 282 aaKnown RBP19.53■□□□□ 0.72
LMNB1-202ENST00000395354 ADRA1AP35348 466 aa19.53■□□□□ 0.72
LMNB1-202ENST00000395354 CRADDP78560 199 aa19.53■□□□□ 0.72
LMNB1-202ENST00000395354 MPP2Q14168 576 aa19.53■□□□□ 0.72
LMNB1-202ENST00000395354 TRMT10BQ6PF06 316 aaKnown RBP19.53■□□□□ 0.72
LMNB1-202ENST00000395354 CIR1Q86X95 450 aaPredicted RBP19.53■□□□□ 0.72
LMNB1-202ENST00000395354 TMEM25Q86YD3 366 aa19.53■□□□□ 0.72
LMNB1-202ENST00000395354 IRF7Q92985 503 aa19.53■□□□□ 0.72
LMNB1-202ENST00000395354 CHMP6Q96FZ7 201 aa19.53■□□□□ 0.72
LMNB1-202ENST00000395354 IMP4Q96G21 291 aaKnown RBP19.53■□□□□ 0.72
LMNB1-202ENST00000395354 CCT8L2Q96SF2 557 aa19.53■□□□□ 0.72
LMNB1-202ENST00000395354 SPHK2Q9NRA0 654 aa19.53■□□□□ 0.72
LMNB1-202ENST00000395354 SMYD2Q9NRG4 433 aa19.53■□□□□ 0.72
LMNB1-202ENST00000395354 SOX13Q9UN79 622 aa19.53■□□□□ 0.72
LMNB1-202ENST00000395354 FAM169AQ9Y6X4 670 aa19.53■□□□□ 0.72
LMNB1-202ENST00000395354 MYOFQ9NZM1 2061 aa19.53■□□□□ 0.72
LMNB1-202ENST00000395354 UNC80Q8N2C7 3258 aa19.53■□□□□ 0.72
LMNB1-202ENST00000395354 GFRA2O00451 464 aa19.53■□□□□ 0.72
LMNB1-202ENST00000395354 NDUFAB1O14561 156 aa19.53■□□□□ 0.72
LMNB1-202ENST00000395354 USP12O75317 370 aa19.53■□□□□ 0.72
LMNB1-202ENST00000395354 ARSAP15289 507 aa19.53■□□□□ 0.72
LMNB1-202ENST00000395354 KRT4P19013 534 aa19.53■□□□□ 0.72
LMNB1-202ENST00000395354 SEC24CP53992 1094 aa19.53■□□□□ 0.72
LMNB1-202ENST00000395354 MGAT5Q09328 741 aa19.53■□□□□ 0.72
LMNB1-202ENST00000395354 NIPAL4Q0D2K0 466 aa19.53■□□□□ 0.72
LMNB1-202ENST00000395354 LY6G5CQ5SRR4 150 aa19.53■□□□□ 0.72
LMNB1-202ENST00000395354 TMCO4Q5TGY1 634 aa19.53■□□□□ 0.72
LMNB1-202ENST00000395354 SETD3Q86TU7 594 aaPredicted RBP19.53■□□□□ 0.72
LMNB1-202ENST00000395354 CFAP52Q8N1V2 620 aa19.53■□□□□ 0.72
LMNB1-202ENST00000395354 ANKRD42Q8N9B4 389 aa19.53■□□□□ 0.72
LMNB1-202ENST00000395354 SPATA22Q8NHS9 363 aa19.53■□□□□ 0.72
LMNB1-202ENST00000395354 DENND1AQ8TEH3 1009 aa19.53■□□□□ 0.72
LMNB1-202ENST00000395354 DDI1Q8WTU0 396 aa19.53■□□□□ 0.72
LMNB1-202ENST00000395354 PTCD2Q8WV60 388 aaKnown RBP19.53■□□□□ 0.72
LMNB1-202ENST00000395354 DYDC1Q8WWB3 177 aa19.53■□□□□ 0.72
LMNB1-202ENST00000395354 ATP2A3Q93084 1043 aa19.53■□□□□ 0.72
LMNB1-202ENST00000395354 BRD9Q9H8M2 597 aa19.53■□□□□ 0.72
LMNB1-202ENST00000395354 RPS6KL1Q9Y6S9 549 aa19.53■□□□□ 0.72
LMNB1-202ENST00000395354 TCF20Q9UGU0 1960 aaKnown RBP19.52■□□□□ 0.72
LMNB1-202ENST00000395354 A0A1B0GVM2 712 aa19.52■□□□□ 0.71
LMNB1-202ENST00000395354 ILVBLA1L0T0 632 aa19.52■□□□□ 0.71
LMNB1-202ENST00000395354 TCAF2A6NFQ2 919 aa19.52■□□□□ 0.71
LMNB1-202ENST00000395354 C19orf67A6NJJ6 358 aa19.52■□□□□ 0.71
LMNB1-202ENST00000395354 PIAS1O75925 651 aa19.52■□□□□ 0.71
LMNB1-202ENST00000395354 ZWINTO95229 277 aa19.52■□□□□ 0.71
LMNB1-202ENST00000395354 NFATC1O95644 943 aa19.52■□□□□ 0.71
LMNB1-202ENST00000395354 CYBBP04839 570 aa19.52■□□□□ 0.71
LMNB1-202ENST00000395354 RPS24P62847 133 aaKnown RBP19.52■□□□□ 0.71
LMNB1-202ENST00000395354 GNA12Q03113 381 aa19.52■□□□□ 0.71
LMNB1-202ENST00000395354 DNAJC3Q13217 504 aa19.52■□□□□ 0.71
LMNB1-202ENST00000395354 DHCR24Q15392 516 aa19.52■□□□□ 0.71
LMNB1-202ENST00000395354 MPPE1Q53F39 396 aa19.52■□□□□ 0.71
LMNB1-202ENST00000395354 ZNF354CQ86Y25 554 aa19.52■□□□□ 0.71
LMNB1-202ENST00000395354 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.52■□□□□ 0.715e-8■■■■■ 60.8
LMNB1-202ENST00000395354 CKAP2Q8WWK9 683 aa19.52■□□□□ 0.71
LMNB1-202ENST00000395354 PRICKLE1Q96MT3 831 aaPredicted RBP19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms