RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 VPS50Q96JG6 964 aa11.79□□□□□ -0.52
UBE2D3-209ENST00000394804 ASB2Q96Q27 587 aa11.79□□□□□ -0.52
UBE2D3-209ENST00000394804 ADNPQ9H2P0 1102 aa11.79□□□□□ -0.52
UBE2D3-209ENST00000394804 ALG9Q9H6U8 611 aa11.79□□□□□ -0.52
UBE2D3-209ENST00000394804 DSEQ9UL01 958 aa11.79□□□□□ -0.52
UBE2D3-209ENST00000394804 PDHXO00330 501 aa11.79□□□□□ -0.52
UBE2D3-209ENST00000394804 FAM189A1O60320 539 aa11.79□□□□□ -0.52
UBE2D3-209ENST00000394804 ZNF23P17027 643 aa11.79□□□□□ -0.52
UBE2D3-209ENST00000394804 PSEN2P49810 448 aa11.79□□□□□ -0.52
UBE2D3-209ENST00000394804 AMIGO2Q86SJ2 522 aa11.79□□□□□ -0.52
UBE2D3-209ENST00000394804 DCP1BQ8IZD4 617 aaKnown RBP11.79□□□□□ -0.52
UBE2D3-209ENST00000394804 TEKT5Q96M29 485 aa11.79□□□□□ -0.52
UBE2D3-209ENST00000394804 WDR83Q9BRX9 315 aaKnown RBP11.79□□□□□ -0.52
UBE2D3-209ENST00000394804 SYTL2Q9HCH5 934 aa11.79□□□□□ -0.52
UBE2D3-209ENST00000394804 ATXN10Q9UBB4 475 aa11.79□□□□□ -0.52
UBE2D3-209ENST00000394804 MRPL42Q9Y6G3 142 aaKnown RBP11.79□□□□□ -0.52
UBE2D3-209ENST00000394804 RTN3O95197 1032 aaPredicted RBP11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 HMOX2P30519 316 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 LILRA4P59901 499 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 MPP1Q00013 466 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 DPYSQ14117 519 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 IMPG1Q17R60 797 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 FUT11Q495W5 492 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 C6orf52Q5T4I8 152 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 DCLRE1AQ6PJP8 1040 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 MOB2Q70IA6 237 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 TAS2R42Q7RTR8 314 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 TFAP2DQ7Z6R9 452 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 TMEM130Q8N3G9 435 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 SKA2Q8WVK7 121 aaPredicted RBP11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 LENG1Q96BZ8 264 aaPredicted RBP11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 ULK4Q96C45 1275 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 RPRD1AQ96P16 312 aaPredicted RBP11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 CD274Q9NZQ7 290 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 SF3B1O75533 1304 aaKnown RBP eCLIP11.78□□□□□ -0.522e-6■■■■■ 58.5
UBE2D3-209ENST00000394804 A0A0G2JLL6 359 aaPredicted RBP11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 C16orf96A6NNT2 1141 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 KCNU1A8MYU2 1149 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 INPP4BO15327 924 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 LRIG2O94898 1065 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 XRCC1P18887 633 aaPredicted RBP11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 CYP3A5P20815 502 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 MTTPP55157 894 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 RAD51Q06609 339 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 NIPAL4Q0D2K0 466 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 ILF2Q12905 390 aaKnown RBP11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 PAFAH1B3Q15102 231 aaKnown RBP11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 SYPL2Q5VXT5 272 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 TMEM198Q66K66 360 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 PRRT2Q7Z6L0 340 aaPredicted RBP11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 CAMK1DQ8IU85 385 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 CLVS1Q8IUQ0 354 aaPredicted RBP11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 HASPINQ8TF76 798 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 LZICQ8WZA0 190 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 NTAN1Q96AB6 310 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 CCDC97Q96F63 343 aaPredicted RBP11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 TINF2Q9BSI4 451 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 C9orf16Q9BUW7 83 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 CCDC90BQ9GZT6 254 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 PNPLA3Q9NST1 481 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 RBPJLQ9UBG7 517 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 MTF2Q9Y483 593 aaPredicted RBP11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 AK5Q9Y6K8 562 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 TYW5A2RUC4 315 aaKnown RBP11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 CLOCKO15516 846 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 HCRTO43612 131 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 MMP3P08254 477 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 HOXB8P17481 243 aaPredicted RBP11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 IL4RP24394 825 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 DAOAP59103 153 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 HERC3Q15034 1050 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 DUSP28Q4G0W2 176 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 PPM1LQ5SGD2 360 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 OVOS1Q6IE37 1185 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 TLK2Q86UE8 772 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 CUZD1Q86UP6 607 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 PLD6Q8N2A8 252 aaKnown RBP11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 EGFL8Q99944 293 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 TRMOQ9BU70 441 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 ZCWPW1Q9H0M4 648 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 PIGVQ9NUD9 493 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 PTTG2Q9NZH5 202 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 TSR3Q9UJK0 312 aaKnown RBP11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 BLOC1S6Q9UL45 172 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 IPPQ9Y573 584 aa11.78□□□□□ -0.52
UBE2D3-209ENST00000394804 SMIM35A0A1B0GVV1 85 aa11.77□□□□□ -0.52
UBE2D3-209ENST00000394804 ATP6AP2A0A1C7CYW4 349 aa11.77□□□□□ -0.52
UBE2D3-209ENST00000394804 SYCE1LA8MT33 242 aa11.77□□□□□ -0.52
UBE2D3-209ENST00000394804 NRP2O60462 931 aa11.77□□□□□ -0.52
UBE2D3-209ENST00000394804 RNASEH1O60930 286 aaKnown RBP11.77□□□□□ -0.52
UBE2D3-209ENST00000394804 ATP6AP2O75787 350 aa11.77□□□□□ -0.52
UBE2D3-209ENST00000394804 BAIAP3O94812 1187 aa11.77□□□□□ -0.52
UBE2D3-209ENST00000394804 AMHP03971 560 aa11.77□□□□□ -0.52
UBE2D3-209ENST00000394804 CYP2B6P20813 491 aa11.77□□□□□ -0.52
UBE2D3-209ENST00000394804 SLC7A2P52569 658 aa11.77□□□□□ -0.52
UBE2D3-209ENST00000394804 OLIG2Q13516 323 aa11.77□□□□□ -0.52
UBE2D3-209ENST00000394804 SNX17Q15036 470 aa11.77□□□□□ -0.52
UBE2D3-209ENST00000394804 PTCD2Q8WV60 388 aaKnown RBP11.77□□□□□ -0.52
UBE2D3-209ENST00000394804 SERPINB11Q96P15 392 aa11.77□□□□□ -0.52
UBE2D3-209ENST00000394804 FBXW11Q9UKB1 542 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms