RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 C1GALT1C1Q96EU7 318 aa13.52□□□□□ -0.24
USP49-203ENST00000394253 DDIT4Q9NX09 232 aa13.52□□□□□ -0.24
USP49-203ENST00000394253 GTF3C4Q9UKN8 822 aa13.52□□□□□ -0.24
USP49-203ENST00000394253 RAB26Q9ULW5 256 aa13.52□□□□□ -0.24
USP49-203ENST00000394253 FAM196BA6NMK8 535 aa13.52□□□□□ -0.25
USP49-203ENST00000394253 TRDMT1O14717 391 aaKnown RBP13.52□□□□□ -0.25
USP49-203ENST00000394253 GIMD1P0DJR0 217 aa13.52□□□□□ -0.25
USP49-203ENST00000394253 ZNF7P17097 686 aaPredicted RBP13.52□□□□□ -0.25
USP49-203ENST00000394253 SNX32Q86XE0 403 aa13.52□□□□□ -0.25
USP49-203ENST00000394253 FAIM2Q9BWQ8 316 aa13.52□□□□□ -0.25
USP49-203ENST00000394253 ZFYVE28Q9HCC9 887 aa13.52□□□□□ -0.25
USP49-203ENST00000394253 TTC34A8MYJ7 566 aa13.52□□□□□ -0.25
USP49-203ENST00000394253 M0QX08 132 aa13.52□□□□□ -0.25
USP49-203ENST00000394253 PRR29P0C7W0 189 aa13.52□□□□□ -0.25
USP49-203ENST00000394253 MYBL2P10244 700 aa13.52□□□□□ -0.25
USP49-203ENST00000394253 ING5Q8WYH8 240 aa13.52□□□□□ -0.25
USP49-203ENST00000394253 RNF31Q96EP0 1072 aa13.52□□□□□ -0.25
USP49-203ENST00000394253 AGPAT5Q9NUQ2 364 aa13.52□□□□□ -0.25
USP49-203ENST00000394253 EVA1BQ9NVM1 165 aa13.52□□□□□ -0.25
USP49-203ENST00000394253 ABT1Q9ULW3 272 aaKnown RBP13.52□□□□□ -0.25
USP49-203ENST00000394253 ZNF518AQ6AHZ1 1483 aa13.52□□□□□ -0.25
USP49-203ENST00000394253 TRMUO75648 421 aaKnown RBP13.52□□□□□ -0.25
USP49-203ENST00000394253 YES1P07947 543 aa13.52□□□□□ -0.25
USP49-203ENST00000394253 OR56A5P0C7T3 313 aa13.52□□□□□ -0.25
USP49-203ENST00000394253 AXLP30530 894 aa13.52□□□□□ -0.25
USP49-203ENST00000394253 POLR2LP62875 67 aaKnown RBP13.52□□□□□ -0.25
USP49-203ENST00000394253 BRSK2Q8IWQ3 736 aa13.52□□□□□ -0.25
USP49-203ENST00000394253 SPERTQ8NA61 448 aa13.52□□□□□ -0.25
USP49-203ENST00000394253 ZNF75CPQ92670 426 aaPredicted RBP13.52□□□□□ -0.25
USP49-203ENST00000394253 GREM2Q9H772 168 aa13.52□□□□□ -0.25
USP49-203ENST00000394253 AAASQ9NRG9 546 aa13.52□□□□□ -0.25
USP49-203ENST00000394253 LEF1Q9UJU2 399 aaPredicted RBP13.52□□□□□ -0.25
USP49-203ENST00000394253 PDE2AO00408 941 aaPredicted RBP13.52□□□□□ -0.25
USP49-203ENST00000394253 LSM8O95777 96 aaKnown RBP13.52□□□□□ -0.25
USP49-203ENST00000394253 TFRCP02786 760 aaKnown RBP13.52□□□□□ -0.25
USP49-203ENST00000394253 FTH1P02794 183 aa13.52□□□□□ -0.25
USP49-203ENST00000394253 PGAM1P18669 254 aa13.52□□□□□ -0.25
USP49-203ENST00000394253 PBLDP30039 288 aaPredicted RBP13.52□□□□□ -0.25
USP49-203ENST00000394253 SEPHS1P49903 392 aa13.52□□□□□ -0.25
USP49-203ENST00000394253 SYT12Q8IV01 421 aa13.52□□□□□ -0.25
USP49-203ENST00000394253 SLC47A1Q96FL8 570 aa13.52□□□□□ -0.25
USP49-203ENST00000394253 VPS45Q9NRW7 570 aa13.52□□□□□ -0.25
USP49-203ENST00000394253 PCYT1BQ9Y5K3 369 aaPredicted RBP13.52□□□□□ -0.25
USP49-203ENST00000394253 CDC42BPBQ9Y5S2 1711 aa13.52□□□□□ -0.25
USP49-203ENST00000394253 E7ENX8 843 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 PRKD3O94806 890 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 NAMPTP43490 491 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 OXCT1P55809 520 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 ELF3P78545 371 aaPredicted RBP13.51□□□□□ -0.25
USP49-203ENST00000394253 HGH1Q9BTY7 390 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 PLA2G4CQ9UP65 541 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 NPHP3-ACAD11A0A0J9YXS1 232 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 AIPO00170 330 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 KAT7O95251 611 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 GYPCP04921 128 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 PGRP06401 933 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 HMBSP08397 361 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 USP17L8P0C7I0 530 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 ALADP13716 330 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 GADD45AP24522 165 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 GPD2P43304 727 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 CCDC28AQ8IWP9 274 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 NXPE2Q96DL1 559 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 KIAA1683Q9H0B3 1180 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 TMBIM6P55061 237 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 RTL4Q6ZR62 310 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 RC3H2Q9HBD1 1191 aaKnown RBP13.51□□□□□ -0.25
USP49-203ENST00000394253 FER1L6Q2WGJ9 1857 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 FAM228BP0C875 321 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 RPL14P50914 215 aaKnown RBP13.51□□□□□ -0.25
USP49-203ENST00000394253 SLC7A2P52569 658 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 CDH17Q12864 832 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 RAB12Q6IQ22 244 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 ANKRD13AQ8IZ07 590 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 SPATA9Q9BWV2 254 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 TTLL2Q9BWV7 592 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 MAN2B2Q9Y2E5 1009 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 ZBTB14O43829 449 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 LRG1P02750 347 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 PPIBP23284 216 aaKnown RBP13.51□□□□□ -0.25
USP49-203ENST00000394253 TBC1D21Q8IYX1 336 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 ZNF518BQ9C0D4 1074 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 BCS1LQ9Y276 419 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 USP17L15C9J2P7 530 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 USP17L13C9JLJ4 530 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 USP17L11C9JVI0 530 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 USP17L18D6R9N7 530 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 USP17L22D6RA61 530 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 USP17L17D6RBQ6 530 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 USP17L19D6RCP7 530 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 USP17L20D6RJB6 530 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 I3L521 148 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 USP17L24Q0WX57 530 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 USP17L6PQ6QN14 398 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 POU5F2Q8N7G0 328 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 TCP10LQ8TDR4 215 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 DAGLAQ9Y4D2 1042 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 CDC42BPGQ6DT37 1551 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 SLC28A1O00337 649 aa13.51□□□□□ -0.25
USP49-203ENST00000394253 NOS2P35228 1153 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms