RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 KDELR3O43731 214 aa17.75■□□□□ 0.43
SNRPA1-202ENST00000394082 CSO75390 466 aaKnown RBP17.75■□□□□ 0.43
SNRPA1-202ENST00000394082 PLEKP08567 350 aaPredicted RBP17.75■□□□□ 0.43
SNRPA1-202ENST00000394082 UNGP13051 313 aaPredicted RBP17.75■□□□□ 0.43
SNRPA1-202ENST00000394082 JUNDP17535 347 aa17.75■□□□□ 0.43
SNRPA1-202ENST00000394082 SUOXP51687 545 aa17.75■□□□□ 0.43
SNRPA1-202ENST00000394082 JAM2P57087 298 aa17.75■□□□□ 0.43
SNRPA1-202ENST00000394082 FMO1Q01740 532 aa17.75■□□□□ 0.43
SNRPA1-202ENST00000394082 PDE1CQ14123 709 aaPredicted RBP17.75■□□□□ 0.43
SNRPA1-202ENST00000394082 C15orf59Q2T9L4 293 aaPredicted RBP17.75■□□□□ 0.43
SNRPA1-202ENST00000394082 HSP90AA4PQ58FG1 418 aa17.75■□□□□ 0.43
SNRPA1-202ENST00000394082 ZNF542PQ5EBM4 170 aa17.75■□□□□ 0.43
SNRPA1-202ENST00000394082 RWDD4Q6NW29 188 aaKnown RBP17.75■□□□□ 0.43
SNRPA1-202ENST00000394082 WDR48Q8TAF3 677 aa17.75■□□□□ 0.43
SNRPA1-202ENST00000394082 ENOX1Q8TC92 643 aaKnown RBP17.75■□□□□ 0.43
SNRPA1-202ENST00000394082 IFI44Q8TCB0 444 aa17.75■□□□□ 0.43
SNRPA1-202ENST00000394082 BOCQ9BWV1 1114 aa17.75■□□□□ 0.43
SNRPA1-202ENST00000394082 C1QTNF7Q9BXJ2 289 aa17.75■□□□□ 0.43
SNRPA1-202ENST00000394082 DKK3Q9UBP4 350 aa17.75■□□□□ 0.43
SNRPA1-202ENST00000394082 KLF15Q9UIH9 416 aa17.75■□□□□ 0.43
SNRPA1-202ENST00000394082 FAM72CH0Y354 149 aa17.74■□□□□ 0.43
SNRPA1-202ENST00000394082 NEMP1O14524 444 aa17.74■□□□□ 0.43
SNRPA1-202ENST00000394082 SPINT1O43278 529 aa17.74■□□□□ 0.43
SNRPA1-202ENST00000394082 USP12O75317 370 aa17.74■□□□□ 0.43
SNRPA1-202ENST00000394082 TCEA3O75764 348 aa17.74■□□□□ 0.43
SNRPA1-202ENST00000394082 NEBLO76041 1014 aa17.74■□□□□ 0.43
SNRPA1-202ENST00000394082 CHRNB2P17787 502 aa17.74■□□□□ 0.43
SNRPA1-202ENST00000394082 SOX5P35711 763 aa17.74■□□□□ 0.43
SNRPA1-202ENST00000394082 HDAC4P56524 1084 aa17.74■□□□□ 0.43
SNRPA1-202ENST00000394082 YBEYP58557 167 aaPredicted RBP17.74■□□□□ 0.43
SNRPA1-202ENST00000394082 GABREP78334 506 aa17.74■□□□□ 0.43
SNRPA1-202ENST00000394082 RAD51Q06609 339 aa17.74■□□□□ 0.43
SNRPA1-202ENST00000394082 PTP4A2Q12974 167 aa17.74■□□□□ 0.43
SNRPA1-202ENST00000394082 EIF2B5Q13144 721 aaKnown RBP17.74■□□□□ 0.43
SNRPA1-202ENST00000394082 CDO1Q16878 200 aa17.74■□□□□ 0.43
SNRPA1-202ENST00000394082 ISXQ2M1V0 245 aa17.74■□□□□ 0.43
SNRPA1-202ENST00000394082 FAM72AQ5TYM5 149 aa17.74■□□□□ 0.43
SNRPA1-202ENST00000394082 FAM72DQ6L9T8 149 aa17.74■□□□□ 0.43
SNRPA1-202ENST00000394082 FAM72BQ86X60 149 aa17.74■□□□□ 0.43
SNRPA1-202ENST00000394082 MAPK15Q8TD08 544 aa17.74■□□□□ 0.43
SNRPA1-202ENST00000394082 GPT2Q8TD30 523 aa17.74■□□□□ 0.43
SNRPA1-202ENST00000394082 HCAR2Q8TDS4 363 aa17.74■□□□□ 0.43
SNRPA1-202ENST00000394082 SLC20A1Q8WUM9 679 aa17.74■□□□□ 0.43
SNRPA1-202ENST00000394082 WBP1Q96G27 269 aa17.74■□□□□ 0.43
SNRPA1-202ENST00000394082 GDAP1L1Q96MZ0 367 aa17.74■□□□□ 0.43
SNRPA1-202ENST00000394082 LGMNQ99538 433 aa17.74■□□□□ 0.43
SNRPA1-202ENST00000394082 IL12RB2Q99665 862 aa17.74■□□□□ 0.43
SNRPA1-202ENST00000394082 DPH1Q9BZG8 443 aa17.74■□□□□ 0.43
SNRPA1-202ENST00000394082 TTYH3Q9C0H2 523 aa17.74■□□□□ 0.43
SNRPA1-202ENST00000394082 NUP62CLQ9H1M0 184 aa17.74■□□□□ 0.43
SNRPA1-202ENST00000394082 ASCL3Q9NQ33 180 aa17.74■□□□□ 0.43
SNRPA1-202ENST00000394082 CHMP5Q9NZZ3 219 aa17.74■□□□□ 0.43
SNRPA1-202ENST00000394082 SPASTQ9UBP0 616 aa17.74■□□□□ 0.43
SNRPA1-202ENST00000394082 DNAI1Q9UI46 699 aa17.74■□□□□ 0.43
SNRPA1-202ENST00000394082 SSUH2Q9Y2M2 353 aa17.74■□□□□ 0.43
SNRPA1-202ENST00000394082 ACTL7AQ9Y615 435 aa17.74■□□□□ 0.43
SNRPA1-202ENST00000394082 CAPN8A6NHC0 703 aa17.73■□□□□ 0.43
SNRPA1-202ENST00000394082 LMO7DNF2Z398 122 aa17.73■□□□□ 0.43
SNRPA1-202ENST00000394082 KRIT1O00522 736 aa17.73■□□□□ 0.43
SNRPA1-202ENST00000394082 GFPT2O94808 682 aa17.73■□□□□ 0.43
SNRPA1-202ENST00000394082 MPOP05164 745 aa17.73■□□□□ 0.43
SNRPA1-202ENST00000394082 UGT2B4P06133 528 aa17.73■□□□□ 0.43
SNRPA1-202ENST00000394082 KRT3P12035 628 aa17.73■□□□□ 0.43
SNRPA1-202ENST00000394082 MLLT3P42568 568 aaPredicted RBP17.73■□□□□ 0.43
SNRPA1-202ENST00000394082 RPIAP49247 311 aa17.73■□□□□ 0.43
SNRPA1-202ENST00000394082 AIF1P55008 147 aa17.73■□□□□ 0.43
SNRPA1-202ENST00000394082 CCDC173Q0VFZ6 552 aa17.73■□□□□ 0.43
SNRPA1-202ENST00000394082 RAB6CQ53S08 254 aa17.73■□□□□ 0.43
SNRPA1-202ENST00000394082 CDKAL1Q5VV42 579 aa17.73■□□□□ 0.43
SNRPA1-202ENST00000394082 GDPD4Q6W3E5 623 aa17.73■□□□□ 0.43
SNRPA1-202ENST00000394082 TTC7BQ86TV6 843 aa17.73■□□□□ 0.43
SNRPA1-202ENST00000394082 PHF13Q86YI8 300 aaPredicted RBP17.73■□□□□ 0.43
SNRPA1-202ENST00000394082 RYBPQ8N488 228 aaPredicted RBP17.73■□□□□ 0.43
SNRPA1-202ENST00000394082 RTL3Q8N8U3 475 aaKnown RBP17.73■□□□□ 0.43
SNRPA1-202ENST00000394082 JOSD2Q8TAC2 188 aa17.73■□□□□ 0.43
SNRPA1-202ENST00000394082 FAM172AQ8WUF8 416 aa17.73■□□□□ 0.43
SNRPA1-202ENST00000394082 SNRNP27Q8WVK2 155 aaKnown RBP17.73■□□□□ 0.43
SNRPA1-202ENST00000394082 GLMNQ92990 594 aa17.73■□□□□ 0.43
SNRPA1-202ENST00000394082 NAT6Q93015 286 aa17.73■□□□□ 0.43
SNRPA1-202ENST00000394082 KLHL32Q96NJ5 620 aa17.73■□□□□ 0.43
SNRPA1-202ENST00000394082 CPEB1Q9BZB8 566 aaKnown RBP17.73■□□□□ 0.43
SNRPA1-202ENST00000394082 RAB6CQ9H0N0 254 aa17.73■□□□□ 0.43
SNRPA1-202ENST00000394082 THSD1Q9NS62 852 aa17.73■□□□□ 0.43
SNRPA1-202ENST00000394082 PCDHGA8Q9Y5G5 932 aa17.73■□□□□ 0.43
SNRPA1-202ENST00000394082 CFAP46Q8IYW2 2715 aa17.73■□□□□ 0.43
SNRPA1-202ENST00000394082 WASH4PA8MWX3 477 aa17.72■□□□□ 0.43
SNRPA1-202ENST00000394082 ERVH48-1M5A8F1 160 aa17.72■□□□□ 0.43
SNRPA1-202ENST00000394082 C1QL1O75973 258 aa17.72■□□□□ 0.43
SNRPA1-202ENST00000394082 TM7SF2O76062 418 aa17.72■□□□□ 0.43
SNRPA1-202ENST00000394082 TPM2P07951 284 aa17.72■□□□□ 0.43
SNRPA1-202ENST00000394082 GKP32189 559 aa17.72■□□□□ 0.43
SNRPA1-202ENST00000394082 PEX5P50542 639 aa17.72■□□□□ 0.43
SNRPA1-202ENST00000394082 THOP1P52888 689 aa17.72■□□□□ 0.43
SNRPA1-202ENST00000394082 TMPRSS3P57727 454 aa17.72■□□□□ 0.43
SNRPA1-202ENST00000394082 POLR2FP61218 127 aaKnown RBP17.72■□□□□ 0.43
SNRPA1-202ENST00000394082 NR0B2Q15466 257 aa17.72■□□□□ 0.43
SNRPA1-202ENST00000394082 TPRG1LQ5T0D9 272 aa17.72■□□□□ 0.43
SNRPA1-202ENST00000394082 BROXQ5VW32 411 aa17.72■□□□□ 0.43
SNRPA1-202ENST00000394082 SLFN11Q7Z7L1 901 aa17.72■□□□□ 0.43
SNRPA1-202ENST00000394082 SDR16C5Q8N3Y7 309 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms