RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 MFSD4BQ5TF39 518 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 C15orf52Q6ZUT6 534 aaKnown RBP13.24□□□□□ -0.29
LCA5-202ENST00000392959 LRRC49Q8IUZ0 686 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 IL31RAQ8NI17 732 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 LRRN4Q8WUT4 740 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 PPP3R2Q96LZ3 170 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 MRIQ9BWK5 157 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 CLEC4MQ9H2X3 399 aaPredicted RBP13.24□□□□□ -0.29
LCA5-202ENST00000392959 FANCEQ9HB96 536 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 KLHL1Q9NR64 748 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 RSL24D1Q9UHA3 163 aaKnown RBP13.24□□□□□ -0.29
LCA5-202ENST00000392959 EFR3BQ9Y2G0 817 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 AGLP35573 1532 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 RIC1Q4ADV7 1423 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 DYRK3O43781 588 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 SEC24AO95486 1093 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 PTPN3P26045 913 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 ADCYAP1R1P41586 468 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 PSEN2P49810 448 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 PTPRNQ16849 979 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 KLHL17Q6TDP4 642 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 GCNT7Q6ZNI0 430 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 ECHDC2Q86YB7 292 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 JOSD2Q8TAC2 188 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 BBS4Q96RK4 519 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 ATP6V1HQ9UI12 483 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 HES2Q9Y543 173 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 GMPPBQ9Y5P6 360 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 DYTNA2CJ06 578 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 TRAFD1O14545 582 aaPredicted RBP13.24□□□□□ -0.29
LCA5-202ENST00000392959 ABLIM1O14639 778 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 STX11O75558 287 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 NUP62P37198 522 aaPredicted RBP13.24□□□□□ -0.29
LCA5-202ENST00000392959 POLD2P49005 469 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 TUFMP49411 452 aaKnown RBP13.24□□□□□ -0.29
LCA5-202ENST00000392959 STX4Q12846 297 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 SLC9A5Q14940 896 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 ARMC3Q5W041 872 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 CLYBLQ8N0X4 340 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 CDYL2Q8N8U2 506 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 ARRDC4Q8NCT1 418 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 ST13P5Q8NFI4 369 aaPredicted RBP13.24□□□□□ -0.29
LCA5-202ENST00000392959 SLC44A1Q8WWI5 657 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 PLEKHG4BQ96PX9 1271 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 STARD7Q9NQZ5 370 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 VPS51Q9UID3 782 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 SHOX2O60902 331 aaPredicted RBP13.24□□□□□ -0.29
LCA5-202ENST00000392959 IFNGR2P38484 337 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 SLC7A2P52569 658 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 PRKCQQ04759 706 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 HSPA14Q0VDF9 509 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 LLGL2Q6P1M3 1020 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 FAM84AQ96KN4 292 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 FGFBP2Q9BYJ0 223 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 CDH19Q9H159 772 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 UBAP1Q9NZ09 502 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 RPS6KA6Q9UK32 745 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 VAV3Q9UKW4 847 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 PSMD13Q9UNM6 376 aa13.24□□□□□ -0.29
LCA5-202ENST00000392959 PDHXO00330 501 aa13.23□□□□□ -0.29
LCA5-202ENST00000392959 ADCY6O43306 1168 aa13.23□□□□□ -0.29
LCA5-202ENST00000392959 NOL4O94818 638 aa13.23□□□□□ -0.29
LCA5-202ENST00000392959 UQCRBP14927 111 aa13.23□□□□□ -0.29
LCA5-202ENST00000392959 ETS2P15036 469 aa13.23□□□□□ -0.29
LCA5-202ENST00000392959 MATKP42679 507 aa13.23□□□□□ -0.29
LCA5-202ENST00000392959 GUCA1AP43080 201 aaPredicted RBP13.23□□□□□ -0.29
LCA5-202ENST00000392959 PLCL1Q15111 1095 aa13.23□□□□□ -0.29
LCA5-202ENST00000392959 SLC1A5Q15758 541 aa13.23□□□□□ -0.29
LCA5-202ENST00000392959 CELF3Q5SZQ8 465 aaKnown RBP13.23□□□□□ -0.29
LCA5-202ENST00000392959 FITM2Q8N6M3 262 aa13.23□□□□□ -0.29
LCA5-202ENST00000392959 MTFMTQ96DP5 389 aaKnown RBP13.23□□□□□ -0.29
LCA5-202ENST00000392959 COQ7Q99807 217 aa13.23□□□□□ -0.29
LCA5-202ENST00000392959 IKZF4Q9H2S9 585 aa13.23□□□□□ -0.29
LCA5-202ENST00000392959 RAD18Q9NS91 495 aa13.23□□□□□ -0.29
LCA5-202ENST00000392959 EHD3Q9NZN3 535 aa13.23□□□□□ -0.29
LCA5-202ENST00000392959 GSTK1Q9Y2Q3 226 aa13.23□□□□□ -0.29
LCA5-202ENST00000392959 AZIN1O14977 448 aa13.23□□□□□ -0.29
LCA5-202ENST00000392959 FGRP09769 529 aa13.23□□□□□ -0.29
LCA5-202ENST00000392959 POLR2LP62875 67 aaKnown RBP13.23□□□□□ -0.29
LCA5-202ENST00000392959 EVX2Q03828 476 aa13.23□□□□□ -0.29
LCA5-202ENST00000392959 NR1D2Q14995 579 aa13.23□□□□□ -0.29
LCA5-202ENST00000392959 PERM1Q5SV97 790 aa13.23□□□□□ -0.29
LCA5-202ENST00000392959 POTEHQ6S545 545 aa13.23□□□□□ -0.29
LCA5-202ENST00000392959 KIAA0408Q6ZU52 694 aa13.23□□□□□ -0.29
LCA5-202ENST00000392959 ZNF513Q8N8E2 541 aaPredicted RBP13.23□□□□□ -0.29
LCA5-202ENST00000392959 OR52K2Q8NGK3 314 aa13.23□□□□□ -0.29
LCA5-202ENST00000392959 C18orf25Q96B23 403 aaPredicted RBP13.23□□□□□ -0.29
LCA5-202ENST00000392959 DGCR14Q96DF8 476 aaKnown RBP13.23□□□□□ -0.29
LCA5-202ENST00000392959 SEMA3CQ99985 751 aa13.23□□□□□ -0.29
LCA5-202ENST00000392959 ASB8Q9H765 288 aa13.23□□□□□ -0.29
LCA5-202ENST00000392959 CLK4Q9HAZ1 481 aaKnown RBP13.23□□□□□ -0.29
LCA5-202ENST00000392959 GBA2Q9HCG7 927 aaPredicted RBP13.23□□□□□ -0.29
LCA5-202ENST00000392959 PCDH18Q9HCL0 1135 aa13.23□□□□□ -0.29
LCA5-202ENST00000392959 SNX6Q9UNH7 406 aa13.23□□□□□ -0.29
LCA5-202ENST00000392959 BTRCQ9Y297 605 aa13.23□□□□□ -0.29
LCA5-202ENST00000392959 PLLPQ9Y342 182 aa13.23□□□□□ -0.29
LCA5-202ENST00000392959 SF3B1O75533 1304 aaKnown RBP eCLIP13.23□□□□□ -0.29
LCA5-202ENST00000392959 IL6P05231 212 aa13.23□□□□□ -0.29
LCA5-202ENST00000392959 C2P06681 752 aa13.23□□□□□ -0.29
LCA5-202ENST00000392959 VAV1P15498 845 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms