RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 ZNF460Q14592 562 aa25.88■■□□□ 1.73
SMARCD3-203ENST00000392811 ACCSLQ4AC99 568 aa25.88■■□□□ 1.73
SMARCD3-203ENST00000392811 ZYG11AQ6WRX3 759 aa25.88■■□□□ 1.73
SMARCD3-203ENST00000392811 TTC8Q8TAM2 541 aa25.88■■□□□ 1.73
SMARCD3-203ENST00000392811 RDH11Q8TC12 318 aa25.88■■□□□ 1.73
SMARCD3-203ENST00000392811 C2orf15Q8WU43 125 aaKnown RBP25.88■■□□□ 1.73
SMARCD3-203ENST00000392811 GATA5Q9BWX5 397 aaPredicted RBP25.88■■□□□ 1.73
SMARCD3-203ENST00000392811 RNPEPL1Q9HAU8 725 aa25.88■■□□□ 1.73
SMARCD3-203ENST00000392811 NOP53Q9NZM5 478 aaKnown RBP25.88■■□□□ 1.73
SMARCD3-203ENST00000392811 FBXO5Q9UKT4 447 aa25.88■■□□□ 1.73
SMARCD3-203ENST00000392811 SORCS3Q9UPU3 1222 aa25.88■■□□□ 1.73
SMARCD3-203ENST00000392811 ENTPD5O75356 428 aa25.87■■□□□ 1.73
SMARCD3-203ENST00000392811 H2AFYO75367 372 aaKnown RBP25.87■■□□□ 1.73
SMARCD3-203ENST00000392811 GLRBP48167 497 aa25.87■■□□□ 1.73
SMARCD3-203ENST00000392811 KDSRQ06136 332 aa25.87■■□□□ 1.73
SMARCD3-203ENST00000392811 SERINC3Q13530 473 aa25.87■■□□□ 1.73
SMARCD3-203ENST00000392811 PARP15Q460N3 678 aa25.87■■□□□ 1.73
SMARCD3-203ENST00000392811 VWA5B1Q5TIE3 1220 aa25.87■■□□□ 1.73
SMARCD3-203ENST00000392811 NEPROQ6NW34 567 aa25.87■■□□□ 1.73
SMARCD3-203ENST00000392811 LCA5Q86VQ0 697 aa25.87■■□□□ 1.73
SMARCD3-203ENST00000392811 ZNF781Q8N8C0 355 aa25.87■■□□□ 1.73
SMARCD3-203ENST00000392811 FBXO27Q8NI29 283 aa25.87■■□□□ 1.73
SMARCD3-203ENST00000392811 RANBP9Q96S59 729 aa25.87■■□□□ 1.73
SMARCD3-203ENST00000392811 ACOT9Q9Y305 439 aa25.87■■□□□ 1.73
SMARCD3-203ENST00000392811 ADAM12O43184 909 aa25.87■■□□□ 1.73
SMARCD3-203ENST00000392811 COL6A2P12110 1019 aa25.87■■□□□ 1.73
SMARCD3-203ENST00000392811 TACR2P21452 398 aa25.87■■□□□ 1.73
SMARCD3-203ENST00000392811 OR1E1P30953 314 aa25.87■■□□□ 1.73
SMARCD3-203ENST00000392811 ACVRL1P37023 503 aa25.87■■□□□ 1.73
SMARCD3-203ENST00000392811 ETFBP38117 255 aa25.87■■□□□ 1.73
SMARCD3-203ENST00000392811 CD151P48509 253 aa25.87■■□□□ 1.73
SMARCD3-203ENST00000392811 KCNQ1P51787 676 aa25.87■■□□□ 1.73
SMARCD3-203ENST00000392811 MSLNQ13421 630 aaPredicted RBP25.87■■□□□ 1.73
SMARCD3-203ENST00000392811 TSTD2Q5T7W7 516 aa25.87■■□□□ 1.73
SMARCD3-203ENST00000392811 SNX30Q5VWJ9 437 aa25.87■■□□□ 1.73
SMARCD3-203ENST00000392811 ARRDC2Q8TBH0 407 aa25.87■■□□□ 1.73
SMARCD3-203ENST00000392811 SCLYQ96I15 445 aa25.87■■□□□ 1.73
SMARCD3-203ENST00000392811 SCYL1Q96KG9 808 aa25.87■■□□□ 1.73
SMARCD3-203ENST00000392811 SPECC1L-ADORA2AF8WAN1 911 aa25.86■■□□□ 1.73
SMARCD3-203ENST00000392811 STMN1P16949 149 aa25.86■■□□□ 1.73
SMARCD3-203ENST00000392811 USP4Q13107 963 aa25.86■■□□□ 1.73
SMARCD3-203ENST00000392811 ACBD5Q5T8D3 534 aaPredicted RBP25.86■■□□□ 1.73
SMARCD3-203ENST00000392811 ARMC3Q5W041 872 aa25.86■■□□□ 1.73
SMARCD3-203ENST00000392811 TADA1Q96BN2 335 aa25.86■■□□□ 1.73
SMARCD3-203ENST00000392811 ELMO2Q96JJ3 720 aa25.86■■□□□ 1.73
SMARCD3-203ENST00000392811 NUDCD1Q96RS6 583 aa25.86■■□□□ 1.73
SMARCD3-203ENST00000392811 SEZ6LQ9BYH1 1024 aa25.86■■□□□ 1.73
SMARCD3-203ENST00000392811 CDH19Q9H159 772 aa25.86■■□□□ 1.73
SMARCD3-203ENST00000392811 SCN5AQ14524 2016 aa25.86■■□□□ 1.73
SMARCD3-203ENST00000392811 AOC1P19801 751 aa25.85■■□□□ 1.73
SMARCD3-203ENST00000392811 DNAJB1P25685 340 aa25.85■■□□□ 1.73
SMARCD3-203ENST00000392811 MAPKAPK2P49137 400 aa25.85■■□□□ 1.73
SMARCD3-203ENST00000392811 TMPRSS6Q8IU80 811 aa25.85■■□□□ 1.73
SMARCD3-203ENST00000392811 FSTL5Q8N475 847 aaPredicted RBP25.85■■□□□ 1.73
SMARCD3-203ENST00000392811 GPATCH11Q8N954 259 aa25.85■■□□□ 1.73
SMARCD3-203ENST00000392811 RBM15BQ8NDT2 890 aaKnown RBP25.85■■□□□ 1.73
SMARCD3-203ENST00000392811 FBXO22Q8NEZ5 403 aa25.85■■□□□ 1.73
SMARCD3-203ENST00000392811 STYXQ8WUJ0 223 aa25.85■■□□□ 1.73
SMARCD3-203ENST00000392811 TTLL2Q9BWV7 592 aa25.85■■□□□ 1.73
SMARCD3-203ENST00000392811 MMADHCQ9H3L0 296 aaPredicted RBP25.85■■□□□ 1.73
SMARCD3-203ENST00000392811 UXTQ9UBK9 157 aaPredicted RBP25.85■■□□□ 1.73
SMARCD3-203ENST00000392811 AURKAO14965 403 aa25.85■■□□□ 1.73
SMARCD3-203ENST00000392811 NUMBP49757 651 aa25.85■■□□□ 1.73
SMARCD3-203ENST00000392811 KPNA1P52294 538 aaPredicted RBP25.85■■□□□ 1.73
SMARCD3-203ENST00000392811 YBEYP58557 167 aaPredicted RBP25.85■■□□□ 1.73
SMARCD3-203ENST00000392811 TAS2R39P59534 338 aa25.85■■□□□ 1.73
SMARCD3-203ENST00000392811 LBRQ14739 615 aaKnown RBP25.85■■□□□ 1.73
SMARCD3-203ENST00000392811 LRRC8EQ6NSJ5 796 aa25.85■■□□□ 1.73
SMARCD3-203ENST00000392811 SH3TC2Q8TF17 1288 aa25.85■■□□□ 1.73
SMARCD3-203ENST00000392811 PQBP1O60828 265 aaKnown RBP25.84■■□□□ 1.73
SMARCD3-203ENST00000392811 DIAPH2O60879 1101 aa25.84■■□□□ 1.73
SMARCD3-203ENST00000392811 CRABP2P29373 138 aa25.84■■□□□ 1.73
SMARCD3-203ENST00000392811 DLG1Q12959 904 aa25.84■■□□□ 1.73
SMARCD3-203ENST00000392811 SIRPB2Q5JXA9 342 aa25.84■■□□□ 1.73
SMARCD3-203ENST00000392811 LIPMQ5VYY2 423 aa25.84■■□□□ 1.73
SMARCD3-203ENST00000392811 CNSTQ6PJW8 725 aa25.84■■□□□ 1.73
SMARCD3-203ENST00000392811 LGI2Q8N0V4 545 aa25.84■■□□□ 1.73
SMARCD3-203ENST00000392811 CFAP52Q8N1V2 620 aa25.84■■□□□ 1.73
SMARCD3-203ENST00000392811 NXNL1Q96CM4 212 aa25.84■■□□□ 1.73
SMARCD3-203ENST00000392811 MOCOSQ96EN8 888 aa25.84■■□□□ 1.73
SMARCD3-203ENST00000392811 GPR78Q96P69 363 aa25.84■■□□□ 1.73
SMARCD3-203ENST00000392811 BPTFQ12830 3046 aa25.83■■□□□ 1.73
SMARCD3-203ENST00000392811 TARM1B6A8C7 271 aa25.83■■□□□ 1.73
SMARCD3-203ENST00000392811 GJB3O75712 270 aa25.83■■□□□ 1.73
SMARCD3-203ENST00000392811 RPL17P18621 184 aaKnown RBP25.83■■□□□ 1.73
SMARCD3-203ENST00000392811 PGM1P36871 562 aa25.83■■□□□ 1.73
SMARCD3-203ENST00000392811 KIAA0408Q6ZU52 694 aa25.83■■□□□ 1.73
SMARCD3-203ENST00000392811 LRRC43Q8N309 656 aa25.83■■□□□ 1.73
SMARCD3-203ENST00000392811 OR13J1Q8NGT2 312 aa25.83■■□□□ 1.73
SMARCD3-203ENST00000392811 COG4Q9H9E3 785 aa25.83■■□□□ 1.73
SMARCD3-203ENST00000392811 ACSS2Q9NR19 701 aa25.83■■□□□ 1.73
SMARCD3-203ENST00000392811 F5H5T6 163 aa25.83■■□□□ 1.73
SMARCD3-203ENST00000392811 PRAMEF11O60813 436 aa25.83■■□□□ 1.73
SMARCD3-203ENST00000392811 KLHL2O95198 593 aa25.83■■□□□ 1.73
SMARCD3-203ENST00000392811 GRIA4P48058 902 aa25.83■■□□□ 1.73
SMARCD3-203ENST00000392811 ZNF789Q5FWF6 425 aa25.83■■□□□ 1.73
SMARCD3-203ENST00000392811 SPATA6LQ8N4H0 392 aa25.83■■□□□ 1.73
SMARCD3-203ENST00000392811 ENDOVQ8N8Q3 282 aaKnown RBP25.83■■□□□ 1.73
SMARCD3-203ENST00000392811 TDRD5Q8NAT2 981 aaKnown RBP25.83■■□□□ 1.73
SMARCD3-203ENST00000392811 ZNF296Q8WUU4 475 aaPredicted RBP25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms