RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 CLTBP09497 229 aa16.67■□□□□ 0.26
SNX9-201ENST00000392185 IL10P22301 178 aa16.67■□□□□ 0.26
SNX9-201ENST00000392185 USP45Q70EL2 814 aa16.67■□□□□ 0.26
SNX9-201ENST00000392185 METTL6Q8TCB7 284 aa16.67■□□□□ 0.26
SNX9-201ENST00000392185 THUMPD3Q9BV44 507 aaKnown RBP16.67■□□□□ 0.26
SNX9-201ENST00000392185 MRPL46Q9H2W6 279 aaKnown RBP16.67■□□□□ 0.26
SNX9-201ENST00000392185 EFCAB1Q9HAE3 211 aa16.67■□□□□ 0.26
SNX9-201ENST00000392185 SEMA4BQ9NPR2 832 aaPredicted RBP16.67■□□□□ 0.26
SNX9-201ENST00000392185 TMEM51Q9NW97 253 aa16.67■□□□□ 0.26
SNX9-201ENST00000392185 ZMYM5Q9UJ78 669 aa16.67■□□□□ 0.26
SNX9-201ENST00000392185 A0A1B0GUL6 1792 aa16.67■□□□□ 0.26
SNX9-201ENST00000392185 CCDC85CA6NKD9 419 aa16.67■□□□□ 0.26
SNX9-201ENST00000392185 UBDO15205 165 aa16.67■□□□□ 0.26
SNX9-201ENST00000392185 GCATO75600 419 aa16.67■□□□□ 0.26
SNX9-201ENST00000392185 LYPLA1O75608 230 aaPredicted RBP16.67■□□□□ 0.26
SNX9-201ENST00000392185 THRAP10827 490 aa16.67■□□□□ 0.26
SNX9-201ENST00000392185 CDH13P55290 713 aa16.67■□□□□ 0.26
SNX9-201ENST00000392185 IL2P60568 153 aa16.67■□□□□ 0.26
SNX9-201ENST00000392185 LRRC74AQ0VAA2 488 aa16.67■□□□□ 0.26
SNX9-201ENST00000392185 TRIP4Q15650 581 aaPredicted RBP16.67■□□□□ 0.26
SNX9-201ENST00000392185 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.67■□□□□ 0.26
SNX9-201ENST00000392185 CES5AQ6NT32 575 aa16.67■□□□□ 0.26
SNX9-201ENST00000392185 PKN3Q6P5Z2 889 aa16.67■□□□□ 0.26
SNX9-201ENST00000392185 ZNF572Q7Z3I7 529 aaPredicted RBP16.67■□□□□ 0.26
SNX9-201ENST00000392185 DNAJB7Q7Z6W7 309 aaPredicted RBP16.67■□□□□ 0.26
SNX9-201ENST00000392185 IFNLR1Q8IU57 520 aaPredicted RBP16.67■□□□□ 0.26
SNX9-201ENST00000392185 SLC22A9Q8IVM8 553 aa16.67■□□□□ 0.26
SNX9-201ENST00000392185 SYTL1Q8IYJ3 562 aa16.67■□□□□ 0.26
SNX9-201ENST00000392185 KREMEN2Q8NCW0 462 aa16.67■□□□□ 0.26
SNX9-201ENST00000392185 PIWIL2Q8TC59 973 aaKnown RBP16.67■□□□□ 0.26
SNX9-201ENST00000392185 MYLK2Q9H1R3 596 aa16.67■□□□□ 0.26
SNX9-201ENST00000392185 PIF1Q9H611 641 aa16.67■□□□□ 0.26
SNX9-201ENST00000392185 MSRAQ9UJ68 235 aa16.67■□□□□ 0.26
SNX9-201ENST00000392185 TTC24A2A3L6 582 aaPredicted RBP16.66■□□□□ 0.26
SNX9-201ENST00000392185 MEI4A8MW99 385 aa16.66■□□□□ 0.26
SNX9-201ENST00000392185 ENPP3O14638 875 aa16.66■□□□□ 0.26
SNX9-201ENST00000392185 SLC9A3R1O14745 358 aaPredicted RBP16.66■□□□□ 0.26
SNX9-201ENST00000392185 F7P08709 466 aaPredicted RBP16.66■□□□□ 0.26
SNX9-201ENST00000392185 PROZP22891 400 aa16.66■□□□□ 0.26
SNX9-201ENST00000392185 GCKP35557 465 aa16.66■□□□□ 0.26
SNX9-201ENST00000392185 NAB1Q13506 487 aa16.66■□□□□ 0.26
SNX9-201ENST00000392185 TXNDC8Q6A555 127 aa16.66■□□□□ 0.26
SNX9-201ENST00000392185 FAM151BQ6UXP7 276 aa16.66■□□□□ 0.26
SNX9-201ENST00000392185 EFL1Q7Z2Z2 1120 aaKnown RBP16.66■□□□□ 0.26
SNX9-201ENST00000392185 CYP4X1Q8N118 509 aa16.66■□□□□ 0.26
SNX9-201ENST00000392185 GALNT4Q8N4A0 578 aa16.66■□□□□ 0.26
SNX9-201ENST00000392185 KDM4CQ9H3R0 1056 aa16.66■□□□□ 0.26
SNX9-201ENST00000392185 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.66■□□□□ 0.26
SNX9-201ENST00000392185 MYH7BA7E2Y1 1941 aa16.66■□□□□ 0.26
SNX9-201ENST00000392185 FGF1P05230 155 aa16.66■□□□□ 0.26
SNX9-201ENST00000392185 TSHRP16473 764 aa16.66■□□□□ 0.26
SNX9-201ENST00000392185 DRD4P21917 467 aa16.66■□□□□ 0.26
SNX9-201ENST00000392185 FLOT2Q14254 428 aa16.66■□□□□ 0.26
SNX9-201ENST00000392185 QPCTQ16769 361 aa16.66■□□□□ 0.26
SNX9-201ENST00000392185 TRAPPC5Q8IUR0 188 aa16.66■□□□□ 0.26
SNX9-201ENST00000392185 TEKT5Q96M29 485 aa16.66■□□□□ 0.26
SNX9-201ENST00000392185 GBA3Q9H227 469 aa16.66■□□□□ 0.26
SNX9-201ENST00000392185 TNKS2Q9H2K2 1166 aa16.66■□□□□ 0.26
SNX9-201ENST00000392185 ELOVL6Q9H5J4 265 aa16.66■□□□□ 0.26
SNX9-201ENST00000392185 VRTNQ9H8Y1 702 aa16.66■□□□□ 0.26
SNX9-201ENST00000392185 NOD2Q9HC29 1040 aa16.66■□□□□ 0.26
SNX9-201ENST00000392185 VPS45Q9NRW7 570 aa16.66■□□□□ 0.26
SNX9-201ENST00000392185 MYH9P35579 1960 aaKnown RBP16.66■□□□□ 0.26
SNX9-201ENST00000392185 A0A1W2PRU2 124 aa16.66■□□□□ 0.26
SNX9-201ENST00000392185 UGT2B4P06133 528 aa16.66■□□□□ 0.26
SNX9-201ENST00000392185 HLA-DPA1P20036 260 aa16.66■□□□□ 0.26
SNX9-201ENST00000392185 CCNCP24863 283 aa16.66■□□□□ 0.26
SNX9-201ENST00000392185 OLIG2Q13516 323 aa16.66■□□□□ 0.26
SNX9-201ENST00000392185 MARCH8Q5T0T0 291 aa16.66■□□□□ 0.26
SNX9-201ENST00000392185 NCBP2-AS2Q69YL0 99 aa16.66■□□□□ 0.26
SNX9-201ENST00000392185 UNC5BQ8IZJ1 945 aa16.66■□□□□ 0.26
SNX9-201ENST00000392185 PTGR2Q8N8N7 351 aaPredicted RBP16.66■□□□□ 0.26
SNX9-201ENST00000392185 ST13P5Q8NFI4 369 aaPredicted RBP16.66■□□□□ 0.26
SNX9-201ENST00000392185 MED8Q96G25 268 aa16.66■□□□□ 0.26
SNX9-201ENST00000392185 FAR2Q96K12 515 aa16.66■□□□□ 0.26
SNX9-201ENST00000392185 HTATIP2Q9BUP3 242 aa16.66■□□□□ 0.26
SNX9-201ENST00000392185 ASPSCR1Q9BZE9 553 aa16.66■□□□□ 0.26
SNX9-201ENST00000392185 GPR62Q9BZJ7 368 aa16.66■□□□□ 0.26
SNX9-201ENST00000392185 CCDC167Q9P0B6 97 aa16.66■□□□□ 0.26
SNX9-201ENST00000392185 RAD54BQ9Y620 910 aa16.66■□□□□ 0.26
SNX9-201ENST00000392185 PAPPAQ13219 1627 aa16.65■□□□□ 0.26
SNX9-201ENST00000392185 ATP6AP2A0A1C7CYW4 349 aa16.65■□□□□ 0.26
SNX9-201ENST00000392185 H2AFYO75367 372 aaKnown RBP16.65■□□□□ 0.26
SNX9-201ENST00000392185 ATP6AP2O75787 350 aa16.65■□□□□ 0.26
SNX9-201ENST00000392185 LTA4HP09960 611 aaKnown RBP16.65■□□□□ 0.26
SNX9-201ENST00000392185 CALB2P22676 271 aa16.65■□□□□ 0.26
SNX9-201ENST00000392185 CDK7P50613 346 aa16.65■□□□□ 0.26
SNX9-201ENST00000392185 SEMG2Q02383 582 aa16.65■□□□□ 0.26
SNX9-201ENST00000392185 DEFB107AQ8IZN7 70 aa16.65■□□□□ 0.26
SNX9-201ENST00000392185 SYNDIG1Q9H7V2 258 aa16.65■□□□□ 0.26
SNX9-201ENST00000392185 COG4Q9H9E3 785 aa16.65■□□□□ 0.26
SNX9-201ENST00000392185 CARNS1A5YM72 827 aa16.65■□□□□ 0.26
SNX9-201ENST00000392185 ZBTB42B2RXF5 422 aa16.65■□□□□ 0.26
SNX9-201ENST00000392185 MATN3O15232 486 aa16.65■□□□□ 0.26
SNX9-201ENST00000392185 HNRNPLP14866 589 aaKnown RBP eCLIP16.65■□□□□ 0.262e-7■■■■■ 28.5
SNX9-201ENST00000392185 CCNG1P51959 295 aa16.65■□□□□ 0.26
SNX9-201ENST00000392185 RAB10P61026 200 aa16.65■□□□□ 0.26
SNX9-201ENST00000392185 CYLC2Q14093 348 aaPredicted RBP16.65■□□□□ 0.26
SNX9-201ENST00000392185 SCIMPQ6UWF3 145 aa16.65■□□□□ 0.26
SNX9-201ENST00000392185 GPSM1Q86YR5 675 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms