RNA–Protein interactions for RNA: ENST00000392003.6

COL6A3-204, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2 BASIC

Gene COL6A3, Length 3,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-204ENST00000392003 WDR60Q8WVS4 1066 aa9.76□□□□□ -0.85
COL6A3-204ENST00000392003 RTP3Q9BQQ7 232 aa9.76□□□□□ -0.85
COL6A3-204ENST00000392003 C1orf21Q9H246 121 aa9.76□□□□□ -0.85
COL6A3-204ENST00000392003 RBM22Q9NW64 420 aaKnown RBP eCLIP9.76□□□□□ -0.85
COL6A3-204ENST00000392003 STX18Q9P2W9 335 aaKnown RBP9.76□□□□□ -0.85
COL6A3-204ENST00000392003 ZNF212Q9UDV6 495 aa9.76□□□□□ -0.85
COL6A3-204ENST00000392003 TDRKHQ9Y2W6 561 aaKnown RBP9.76□□□□□ -0.85
COL6A3-204ENST00000392003 SIN3BO75182 1162 aa9.76□□□□□ -0.85
COL6A3-204ENST00000392003 AMHP03971 560 aa9.76□□□□□ -0.85
COL6A3-204ENST00000392003 SP100P23497 879 aaPredicted RBP9.76□□□□□ -0.85
COL6A3-204ENST00000392003 MAGEA12P43365 314 aa9.76□□□□□ -0.85
COL6A3-204ENST00000392003 KPNA2P52292 529 aaKnown RBP9.76□□□□□ -0.85
COL6A3-204ENST00000392003 YWHAHQ04917 246 aaPredicted RBP9.76□□□□□ -0.85
COL6A3-204ENST00000392003 SEPT6Q14141 434 aa9.76□□□□□ -0.85
COL6A3-204ENST00000392003 GRM3Q14832 879 aa9.76□□□□□ -0.85
COL6A3-204ENST00000392003 POU6F1Q14863 301 aa9.76□□□□□ -0.85
COL6A3-204ENST00000392003 DLG2Q15700 870 aa9.76□□□□□ -0.85
COL6A3-204ENST00000392003 AGAP9Q5VTM2 703 aa9.76□□□□□ -0.85
COL6A3-204ENST00000392003 TMEM214Q6NUQ4 689 aaKnown RBP9.76□□□□□ -0.85
COL6A3-204ENST00000392003 LRRC74BQ6ZQY2 392 aa9.76□□□□□ -0.85
COL6A3-204ENST00000392003 BHLHA9Q7RTU4 235 aa9.76□□□□□ -0.85
COL6A3-204ENST00000392003 BPHLQ86WA6 291 aaPredicted RBP9.76□□□□□ -0.85
COL6A3-204ENST00000392003 SPATA22Q8NHS9 363 aa9.76□□□□□ -0.85
COL6A3-204ENST00000392003 FCRL2Q96LA5 508 aaPredicted RBP9.76□□□□□ -0.85
COL6A3-204ENST00000392003 FCRL5Q96RD9 977 aa9.76□□□□□ -0.85
COL6A3-204ENST00000392003 LBHD1Q9BQE6 289 aaPredicted RBP9.76□□□□□ -0.85
COL6A3-204ENST00000392003 KIFC1Q9BW19 673 aa9.76□□□□□ -0.85
COL6A3-204ENST00000392003 CDH19Q9H159 772 aa9.76□□□□□ -0.85
COL6A3-204ENST00000392003 ENTPD7Q9NQZ7 604 aa9.76□□□□□ -0.85
COL6A3-204ENST00000392003 SH3GLB1Q9Y371 365 aa9.76□□□□□ -0.85
COL6A3-204ENST00000392003 NUP205Q92621 2012 aa9.76□□□□□ -0.85
COL6A3-204ENST00000392003 LINC00854A0A1B0GVQ3 168 aa9.76□□□□□ -0.85
COL6A3-204ENST00000392003 MATN3O15232 486 aa9.76□□□□□ -0.85
COL6A3-204ENST00000392003 MGEA5O60502 916 aa9.76□□□□□ -0.85
COL6A3-204ENST00000392003 PMPCBO75439 489 aa9.76□□□□□ -0.85
COL6A3-204ENST00000392003 TADA2AO75478 443 aa9.76□□□□□ -0.85
COL6A3-204ENST00000392003 TYMPP19971 482 aa9.76□□□□□ -0.85
COL6A3-204ENST00000392003 SLC12A1Q13621 1099 aa9.76□□□□□ -0.85
COL6A3-204ENST00000392003 ZNF354CQ86Y25 554 aa9.76□□□□□ -0.85
COL6A3-204ENST00000392003 POU5F2Q8N7G0 328 aa9.76□□□□□ -0.85
COL6A3-204ENST00000392003 TDRD5Q8NAT2 981 aaKnown RBP9.76□□□□□ -0.85
COL6A3-204ENST00000392003 BHMTQ93088 406 aa9.76□□□□□ -0.85
COL6A3-204ENST00000392003 ZNF778Q96MU6 729 aa9.76□□□□□ -0.85
COL6A3-204ENST00000392003 ACE2Q9BYF1 805 aaPredicted RBP9.76□□□□□ -0.85
COL6A3-204ENST00000392003 TMLHEQ9NVH6 421 aa9.76□□□□□ -0.85
COL6A3-204ENST00000392003 SFMBT1Q9UHJ3 866 aa9.76□□□□□ -0.85
COL6A3-204ENST00000392003 RUVBL2Q9Y230 463 aaKnown RBP9.76□□□□□ -0.85
COL6A3-204ENST00000392003 ACOT9Q9Y305 439 aa9.76□□□□□ -0.85
COL6A3-204ENST00000392003 M0QZQ0 153 aa9.75□□□□□ -0.85
COL6A3-204ENST00000392003 VAPBO95292 243 aa9.75□□□□□ -0.85
COL6A3-204ENST00000392003 BAG2O95816 211 aa9.75□□□□□ -0.85
COL6A3-204ENST00000392003 INHAP05111 366 aa9.75□□□□□ -0.85
COL6A3-204ENST00000392003 GMPRP36959 345 aa9.75□□□□□ -0.85
COL6A3-204ENST00000392003 SLC5A3P53794 718 aa9.75□□□□□ -0.85
COL6A3-204ENST00000392003 IRF9Q00978 393 aa9.75□□□□□ -0.85
COL6A3-204ENST00000392003 POTEHQ6S545 545 aa9.75□□□□□ -0.85
COL6A3-204ENST00000392003 RIPOR1Q6ZS17 1223 aa9.75□□□□□ -0.85
COL6A3-204ENST00000392003 LRRC49Q8IUZ0 686 aa9.75□□□□□ -0.85
COL6A3-204ENST00000392003 DCP1BQ8IZD4 617 aaKnown RBP9.75□□□□□ -0.85
COL6A3-204ENST00000392003 CNTD1Q8N815 330 aa9.75□□□□□ -0.85
COL6A3-204ENST00000392003 HHIPL1Q96JK4 782 aa9.75□□□□□ -0.85
COL6A3-204ENST00000392003 SUSD3Q96L08 255 aa9.75□□□□□ -0.85
COL6A3-204ENST00000392003 SERPINB11Q96P15 392 aa9.75□□□□□ -0.85
COL6A3-204ENST00000392003 SORT1Q99523 831 aa9.75□□□□□ -0.85
COL6A3-204ENST00000392003 GPR22Q99680 433 aa9.75□□□□□ -0.85
COL6A3-204ENST00000392003 ATAD3AQ9NVI7 634 aa9.75□□□□□ -0.85
COL6A3-204ENST00000392003 ABI2Q9NYB9 513 aaPredicted RBP9.75□□□□□ -0.85
COL6A3-204ENST00000392003 SHROOM3Q8TF72 1996 aa9.75□□□□□ -0.85
COL6A3-204ENST00000392003 MEI4A8MW99 385 aa9.75□□□□□ -0.85
COL6A3-204ENST00000392003 DDHD2O94830 711 aa9.75□□□□□ -0.85
COL6A3-204ENST00000392003 SLC2A3P11169 496 aa9.75□□□□□ -0.85
COL6A3-204ENST00000392003 ACADSP16219 412 aa9.75□□□□□ -0.85
COL6A3-204ENST00000392003 GSTT1P30711 240 aa9.75□□□□□ -0.85
COL6A3-204ENST00000392003 ITKQ08881 620 aa9.75□□□□□ -0.85
COL6A3-204ENST00000392003 MGAT3Q09327 533 aa9.75□□□□□ -0.85
COL6A3-204ENST00000392003 CRY1Q16526 586 aa9.75□□□□□ -0.85
COL6A3-204ENST00000392003 FAM209AQ5JX71 171 aa9.75□□□□□ -0.85
COL6A3-204ENST00000392003 UBE2Q1Q7Z7E8 422 aa9.75□□□□□ -0.85
COL6A3-204ENST00000392003 KLHDC9Q8NEP7 349 aa9.75□□□□□ -0.85
COL6A3-204ENST00000392003 OR10T2Q8NGX3 314 aa9.75□□□□□ -0.85
COL6A3-204ENST00000392003 AGR3Q8TD06 166 aa9.75□□□□□ -0.85
COL6A3-204ENST00000392003 TMEM209Q96SK2 561 aa9.75□□□□□ -0.85
COL6A3-204ENST00000392003 SLC39A8Q9C0K1 460 aa9.75□□□□□ -0.85
COL6A3-204ENST00000392003 SMOC2Q9H3U7 446 aa9.75□□□□□ -0.85
COL6A3-204ENST00000392003 HSFX1Q9UBD0 423 aa9.75□□□□□ -0.85
COL6A3-204ENST00000392003 ZNF638Q14966 1978 aaKnown RBP9.75□□□□□ -0.85
COL6A3-204ENST00000392003 PHGDHO43175 533 aaKnown RBP9.75□□□□□ -0.85
COL6A3-204ENST00000392003 MSI1O43347 362 aaKnown RBP9.75□□□□□ -0.85
COL6A3-204ENST00000392003 FKBP6O75344 327 aa9.75□□□□□ -0.85
COL6A3-204ENST00000392003 MT-CYBP00156 380 aaPredicted RBP9.75□□□□□ -0.85
COL6A3-204ENST00000392003 F7P08709 466 aaPredicted RBP9.75□□□□□ -0.85
COL6A3-204ENST00000392003 COL6A2P12110 1019 aa9.75□□□□□ -0.85
COL6A3-204ENST00000392003 AVPR1AP37288 418 aa9.75□□□□□ -0.85
COL6A3-204ENST00000392003 POLD2P49005 469 aa9.75□□□□□ -0.85
COL6A3-204ENST00000392003 EPHB1P54762 984 aa9.75□□□□□ -0.85
COL6A3-204ENST00000392003 ACAD11Q709F0 780 aa9.75□□□□□ -0.85
COL6A3-204ENST00000392003 LRRTM3Q86VH5 581 aa9.75□□□□□ -0.85
COL6A3-204ENST00000392003 ZC3HC1Q86WB0 502 aaKnown RBP9.75□□□□□ -0.85
COL6A3-204ENST00000392003 REM2Q8IYK8 340 aaPredicted RBP9.75□□□□□ -0.85
COL6A3-204ENST00000392003 PTCD2Q8WV60 388 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms