RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 PCID2Q5JVF3 399 aa19.88■□□□□ 0.77
SHANK1-203ENST00000391813 C12orf56Q8IXR9 622 aa19.88■□□□□ 0.77
SHANK1-203ENST00000391813 DSELQ8IZU8 1212 aa19.88■□□□□ 0.77
SHANK1-203ENST00000391813 MRPL48Q96GC5 212 aaKnown RBP19.88■□□□□ 0.77
SHANK1-203ENST00000391813 ZNF670Q9BS34 389 aa19.88■□□□□ 0.77
SHANK1-203ENST00000391813 VAV3Q9UKW4 847 aa19.88■□□□□ 0.77
SHANK1-203ENST00000391813 TGFB1I1O43294 461 aa19.87■□□□□ 0.77
SHANK1-203ENST00000391813 NRP2O60462 931 aa19.87■□□□□ 0.77
SHANK1-203ENST00000391813 CHI3L1P36222 383 aaPredicted RBP19.87■□□□□ 0.77
SHANK1-203ENST00000391813 ARL10Q8N8L6 244 aa19.87■□□□□ 0.77
SHANK1-203ENST00000391813 WDR36Q8NI36 951 aaKnown RBP19.87■□□□□ 0.77
SHANK1-203ENST00000391813 C10orf82Q8WW14 230 aa19.87■□□□□ 0.77
SHANK1-203ENST00000391813 MRPL9Q9BYD2 267 aaKnown RBP19.87■□□□□ 0.77
SHANK1-203ENST00000391813 TMEM216Q9P0N5 145 aa19.87■□□□□ 0.77
SHANK1-203ENST00000391813 LSM3P62310 102 aaKnown RBP19.87■□□□□ 0.77
SHANK1-203ENST00000391813 ARHGEF7Q14155 803 aa19.87■□□□□ 0.77
SHANK1-203ENST00000391813 C6orf52Q5T4I8 152 aa19.87■□□□□ 0.77
SHANK1-203ENST00000391813 MARC1Q5VT66 337 aa19.87■□□□□ 0.77
SHANK1-203ENST00000391813 KIAA0408Q6ZU52 694 aa19.87■□□□□ 0.77
SHANK1-203ENST00000391813 ERI1Q8IV48 349 aaKnown RBP19.87■□□□□ 0.77
SHANK1-203ENST00000391813 AHI1Q8N157 1196 aa19.87■□□□□ 0.77
SHANK1-203ENST00000391813 NKX2-3Q8TAU0 364 aa19.87■□□□□ 0.77
SHANK1-203ENST00000391813 RPRD1AQ96P16 312 aaPredicted RBP19.87■□□□□ 0.77
SHANK1-203ENST00000391813 CIB1Q99828 191 aa19.87■□□□□ 0.77
SHANK1-203ENST00000391813 MUC13Q9H3R2 512 aa19.87■□□□□ 0.77
SHANK1-203ENST00000391813 NOL11Q9H8H0 719 aaKnown RBP19.87■□□□□ 0.77
SHANK1-203ENST00000391813 SNX15Q9NRS6 342 aa19.87■□□□□ 0.77
SHANK1-203ENST00000391813 PCDHB12Q9Y5F1 795 aa19.87■□□□□ 0.77
SHANK1-203ENST00000391813 NRXN3Q9Y4C0 1643 aa19.87■□□□□ 0.77
SHANK1-203ENST00000391813 A0A087WZ62 844 aa19.87■□□□□ 0.77
SHANK1-203ENST00000391813 CCNKO75909 580 aa19.87■□□□□ 0.77
SHANK1-203ENST00000391813 HMBSP08397 361 aa19.87■□□□□ 0.77
SHANK1-203ENST00000391813 S100A3P33764 101 aa19.87■□□□□ 0.77
SHANK1-203ENST00000391813 CRTC3Q6UUV7 619 aa19.87■□□□□ 0.77
SHANK1-203ENST00000391813 VSTM1Q6UX27 236 aa19.87■□□□□ 0.77
SHANK1-203ENST00000391813 GPR142Q7Z601 462 aa19.87■□□□□ 0.77
SHANK1-203ENST00000391813 FDXACB1Q9BRP7 624 aaPredicted RBP19.87■□□□□ 0.77
SHANK1-203ENST00000391813 PIAS1O75925 651 aa19.87■□□□□ 0.77
SHANK1-203ENST00000391813 ZBTB11O95625 1053 aaPredicted RBP19.87■□□□□ 0.77
SHANK1-203ENST00000391813 CCR1P32246 355 aa19.87■□□□□ 0.77
SHANK1-203ENST00000391813 AQP4P55087 323 aa19.87■□□□□ 0.77
SHANK1-203ENST00000391813 ST8SIA6P61647 398 aa19.87■□□□□ 0.77
SHANK1-203ENST00000391813 LAMTOR4Q0VGL1 99 aa19.87■□□□□ 0.77
SHANK1-203ENST00000391813 PRKG2Q13237 762 aa19.87■□□□□ 0.77
SHANK1-203ENST00000391813 CYP1B1Q16678 543 aa19.87■□□□□ 0.77
SHANK1-203ENST00000391813 PROSER1Q86XN7 944 aa19.87■□□□□ 0.77
SHANK1-203ENST00000391813 DEPDC4Q8N2C3 294 aa19.87■□□□□ 0.77
SHANK1-203ENST00000391813 DRAXINQ8NBI3 349 aaPredicted RBP19.87■□□□□ 0.77
SHANK1-203ENST00000391813 ZDHHC18Q9NUE0 388 aa19.87■□□□□ 0.77
SHANK1-203ENST00000391813 YDJCA8MPS7 323 aa19.86■□□□□ 0.77
SHANK1-203ENST00000391813 ANKRD63C9JTQ0 380 aa19.86■□□□□ 0.77
SHANK1-203ENST00000391813 RGS14O43566 566 aa19.86■□□□□ 0.77
SHANK1-203ENST00000391813 PQBP1O60828 265 aaKnown RBP19.86■□□□□ 0.77
SHANK1-203ENST00000391813 LGR5O75473 907 aa19.86■□□□□ 0.77
SHANK1-203ENST00000391813 TRUB2O95900 331 aaKnown RBP19.86■□□□□ 0.77
SHANK1-203ENST00000391813 VTNP04004 478 aa19.86■□□□□ 0.77
SHANK1-203ENST00000391813 ZNF286BP0CG31 522 aa19.86■□□□□ 0.77
SHANK1-203ENST00000391813 NELFEP18615 380 aaKnown RBP19.86■□□□□ 0.77
SHANK1-203ENST00000391813 ITGALP20701 1170 aa19.86■□□□□ 0.77
SHANK1-203ENST00000391813 ARHGAP36Q6ZRI8 547 aa19.86■□□□□ 0.77
SHANK1-203ENST00000391813 MARK4Q96L34 752 aa19.86■□□□□ 0.77
SHANK1-203ENST00000391813 GPATCH1Q9BRR8 931 aaKnown RBP19.86■□□□□ 0.77
SHANK1-203ENST00000391813 PNMA8BQ9ULN7 279 aaPredicted RBP19.86■□□□□ 0.77
SHANK1-203ENST00000391813 ZNF142P52746 1687 aaPredicted RBP19.86■□□□□ 0.77
SHANK1-203ENST00000391813 TK2O00142 265 aa19.86■□□□□ 0.77
SHANK1-203ENST00000391813 WNT7AO00755 349 aa19.86■□□□□ 0.77
SHANK1-203ENST00000391813 EGFRP00533 1210 aa19.86■□□□□ 0.77
SHANK1-203ENST00000391813 CCR3P51677 355 aa19.86■□□□□ 0.77
SHANK1-203ENST00000391813 USP4Q13107 963 aa19.86■□□□□ 0.77
SHANK1-203ENST00000391813 PHKG1Q16816 387 aa19.86■□□□□ 0.77
SHANK1-203ENST00000391813 MTX3Q5HYI7 312 aa19.86■□□□□ 0.77
SHANK1-203ENST00000391813 ANKS1BQ7Z6G8 1248 aa19.86■□□□□ 0.77
SHANK1-203ENST00000391813 STARD8Q92502 1023 aa19.86■□□□□ 0.77
SHANK1-203ENST00000391813 TBL1YQ9BQ87 522 aa19.86■□□□□ 0.77
SHANK1-203ENST00000391813 LMO7Q8WWI1 1683 aa19.86■□□□□ 0.77
SHANK1-203ENST00000391813 SF3B1O75533 1304 aaKnown RBP eCLIP19.86■□□□□ 0.77
SHANK1-203ENST00000391813 STX11O75558 287 aa19.86■□□□□ 0.77
SHANK1-203ENST00000391813 CLCN5P51795 746 aa19.86■□□□□ 0.77
SHANK1-203ENST00000391813 NFE2Q16621 373 aaPredicted RBP19.86■□□□□ 0.77
SHANK1-203ENST00000391813 BTN2A2Q8WVV5 523 aa19.86■□□□□ 0.77
SHANK1-203ENST00000391813 TNPO3Q9Y5L0 923 aaKnown RBP19.86■□□□□ 0.77
SHANK1-203ENST00000391813 TCF3P15923 654 aa19.86■□□□□ 0.77
SHANK1-203ENST00000391813 ADCYAP1R1P41586 468 aa19.86■□□□□ 0.77
SHANK1-203ENST00000391813 ZBTB46Q86UZ6 589 aa19.86■□□□□ 0.77
SHANK1-203ENST00000391813 SCAIQ8N9R8 606 aa19.86■□□□□ 0.77
SHANK1-203ENST00000391813 OR2T34Q8NGX1 318 aa19.86■□□□□ 0.77
SHANK1-203ENST00000391813 OR2T3Q8NH03 318 aa19.86■□□□□ 0.77
SHANK1-203ENST00000391813 DNAJB14Q8TBM8 379 aa19.86■□□□□ 0.77
SHANK1-203ENST00000391813 STAG3L4Q8TBR4 150 aa19.86■□□□□ 0.77
SHANK1-203ENST00000391813 FAM136AQ96C01 138 aa19.86■□□□□ 0.77
SHANK1-203ENST00000391813 OSMRQ99650 979 aa19.86■□□□□ 0.77
SHANK1-203ENST00000391813 SH3BP1Q9Y3L3 701 aa19.86■□□□□ 0.77
SHANK1-203ENST00000391813 TRPV2Q9Y5S1 764 aa19.86■□□□□ 0.77
SHANK1-203ENST00000391813 ADRB2P07550 413 aa19.85■□□□□ 0.77
SHANK1-203ENST00000391813 TSPAN19P0C672 248 aa19.85■□□□□ 0.77
SHANK1-203ENST00000391813 ALOX15P16050 662 aaPredicted RBP19.85■□□□□ 0.77
SHANK1-203ENST00000391813 CCNFP41002 786 aa19.85■□□□□ 0.77
SHANK1-203ENST00000391813 SLC16A1P53985 500 aa19.85■□□□□ 0.77
SHANK1-203ENST00000391813 OLR1P78380 273 aa19.85■□□□□ 0.77
SHANK1-203ENST00000391813 ZFP69Q49AA0 526 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms