RNA–Protein interactions for RNA: ENST00000390484.1

TRAJ54-201, Transcript of T cell receptor alpha joining 54, humanhuman

APPRIS P1 BASIC

Gene TRAJ54, Length 60 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ54-201ENST00000390484 PIP5K1BO14986 540 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 SYN3O14994 580 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 ZBTB5O15062 677 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 KIAA0391O15091 583 aaKnown RBP-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 NPC1O15118 1278 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 SCAMP1O15126 338 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 MDM4O15151 490 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 LDLRAD4O15165 306 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 SMAD9O15198 467 aaKnown RBP-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 PMM2O15305 246 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 EIF3DO15371 548 aaKnown RBP eCLIP-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 SLC16A5O15375 505 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 HDAC3O15379 428 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 YY2O15391 372 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 CD3EAPO15446 510 aaKnown RBP-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 PLA2G10O15496 165 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 NUPL2O15504 423 aaKnown RBP-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 SOCS1O15524 211 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 CYP27B1O15528 508 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 PDPK1O15530 556 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 LINC01565O15544 149 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 P2RX6O15547 441 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 KCNN4O15554 427 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 PRPF4O43172 522 aaKnown RBP eCLIP-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 ADAM12O43184 909 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 CRXO43186 299 aaPredicted RBP-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 PHF1O43189 567 aaPredicted RBP-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 GPR39O43194 453 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 KLK10O43240 276 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 PRODHO43272 600 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 SART1O43290 800 aaKnown RBP-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 CCP110O43303 1012 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 SEC14L5O43304 696 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 ZSCAN12O43309 604 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 CA12O43570 354 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 DNPH1O43598 174 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 DCXO43602 365 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 HCRTO43612 131 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 HCRTR1O43613 425 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 SNAI2O43623 268 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 NCK2O43639 380 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 TSPAN6O43657 245 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 PLRG1O43660 514 aaKnown RBP-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 PRC1O43663 620 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 PLPP2O43688 288 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 SYNGR3O43761 229 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 LIASO43766 372 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 NUDT21O43809 227 aaKnown RBP-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 RRP9O43818 475 aaKnown RBP-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 IDH3BO43837 385 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 CD5LO43866 347 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 GAS2O43903 313 aaKnown RBP-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 PEX1O43933 1283 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 AKR1B10O60218 316 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 HS6ST1O60243 411 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 ZEB2O60315 1214 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 PIP5K1CO60331 668 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 MARCH6O60337 910 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 KDM1AO60341 852 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 GPR137BO60478 399 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 ZIC3O60481 467 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 ACSL4O60488 711 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 SORBS3O60504 671 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 SYNCRIPO60506 623 aaKnown RBP-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 EIF4EBP3O60516 100 aaPredicted RBP-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 PLOD3O60568 738 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 TLR5O60602 858 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 KPNA6O60684 536 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 UGDHO60701 494 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 TPST2O60704 377 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 CTNND1O60716 968 aaKnown RBP-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 SLC24A1O60721 1099 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 CDC14BO60729 498 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 MAGEC1O60732 1142 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 HCN1O60741 890 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 CYTIPO60759 359 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 USO1O60763 962 aaKnown RBP-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 HNRNPCL1O60812 293 aaKnown RBP-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 PAGE4O60829 102 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 PRAF2O60831 178 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 ZG16O60844 167 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 SHOX2O60902 331 aaPredicted RBP-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 SMPD2O60906 423 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 B4GALT2O60909 372 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 IGSF3O75054 1194 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 WDR1O75083 606 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 ATP9AO75110 1047 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 MFAP3LO75121 409 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 CAND2O75155 1236 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 SOCS5O75159 536 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 SS18L1O75177 396 aaPredicted RBP-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 NPIPB7O75200 414 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 NDUFS7O75251 213 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 GADD45BO75293 160 aaPredicted RBP-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 RTN2O75298 545 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 NDUFS2O75306 463 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 ZNF253O75346 499 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 VPS4BO75351 444 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 PTP4A3O75365 173 aa-0.07□□□□□ -2.42
TRAJ54-201ENST00000390484 PRPF40AO75400 957 aaKnown RBP-0.07□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms