RNA–Protein interactions for RNA: ENST00000380746.8

DNMT3A-203, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-203ENST00000380746 ZNF232Q9UNY5 417 aa11.07□□□□□ -0.64
DNMT3A-203ENST00000380746 RBBP6Q7Z6E9 1792 aaKnown RBP11.07□□□□□ -0.64
DNMT3A-203ENST00000380746 LOXHD1Q8IVV2 1947 aa11.07□□□□□ -0.64
DNMT3A-203ENST00000380746 MYOCOSA0A1B0GUC4 107 aa11.07□□□□□ -0.64
DNMT3A-203ENST00000380746 CAPN8A6NHC0 703 aa11.07□□□□□ -0.64
DNMT3A-203ENST00000380746 CNTFP26441 200 aa11.07□□□□□ -0.64
DNMT3A-203ENST00000380746 GSCP56915 257 aaPredicted RBP11.07□□□□□ -0.64
DNMT3A-203ENST00000380746 CYLC2Q14093 348 aaPredicted RBP11.07□□□□□ -0.64
DNMT3A-203ENST00000380746 DPYSQ14117 519 aa11.07□□□□□ -0.64
DNMT3A-203ENST00000380746 PFKFB4Q16877 469 aa11.07□□□□□ -0.64
DNMT3A-203ENST00000380746 SGO1Q5FBB7 561 aa11.07□□□□□ -0.64
DNMT3A-203ENST00000380746 CST9Q5W186 159 aa11.07□□□□□ -0.64
DNMT3A-203ENST00000380746 ZNF398Q8TD17 642 aa11.07□□□□□ -0.64
DNMT3A-203ENST00000380746 HEXDCQ8WVB3 486 aa11.07□□□□□ -0.64
DNMT3A-203ENST00000380746 OLFM3Q96PB7 478 aa11.07□□□□□ -0.64
DNMT3A-203ENST00000380746 NCKIPSDQ9NZQ3 722 aa11.07□□□□□ -0.64
DNMT3A-203ENST00000380746 MARCH2Q9P0N8 246 aa11.07□□□□□ -0.64
DNMT3A-203ENST00000380746 SUPT3HB4E1H0 165 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 SUPT3HO75486 399 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 SIX3O95343 332 aaPredicted RBP11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 TSHRP16473 764 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 FMO4P31512 558 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 ACVRL1P37023 503 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 GLUD2P49448 558 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 RPL14P50914 215 aaKnown RBP11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 SLC18A1P54219 525 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 USP46P62068 366 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 POLD3Q15054 466 aaPredicted RBP11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 ALKAL1Q6UXT8 129 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 OR9I1Q8NGQ6 314 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 RAET1EQ8TD07 263 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 RSPH1Q8WYR4 309 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 MAF1Q9H063 256 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 CDH19Q9H159 772 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 PTGDR2Q9Y5Y4 395 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 KIF13BQ9NQT8 1826 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 MOXD2PA6NHM9 499 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 LRRC14BA6NHZ5 514 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 HNRNPCL1O60812 293 aaKnown RBP11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 TM7SF2O76062 418 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 TGDSO95455 350 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 CES1P23141 567 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 GEMP55040 296 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 DSG1Q02413 1049 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 PPIDQ08752 370 aaKnown RBP11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 TSTA3Q13630 321 aaPredicted RBP11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 PCID2Q5JVF3 399 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 PRSS55Q6UWB4 352 aaPredicted RBP11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 TMEM86AQ8N2M4 240 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 OR7D4Q8NG98 312 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 ZNF184Q99676 751 aaPredicted RBP11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 TMEM165Q9HC07 324 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 FETUBQ9UGM5 382 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 GTF2IRD1Q9UHL9 959 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 TRHDEQ9UKU6 1024 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 ARL5AQ9Y689 179 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 SHROOM3Q8TF72 1996 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 KCNU1A8MYU2 1149 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 PQBP1O60828 265 aaKnown RBP11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 RAMP2O60895 175 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 COQ9O75208 318 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 PIK3R1P27986 724 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 KCNQ1P51787 676 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 TUSC3Q13454 348 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 ITGA7Q13683 1181 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 PPP1R3AQ16821 1122 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 ZRANB3Q5FWF4 1079 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 PKN3Q6P5Z2 889 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 ATG14Q6ZNE5 492 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 ARCQ7LC44 396 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 LINC00523Q86TU6 105 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 OR13C4Q8NGS5 318 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 RAB3IL1Q8TBN0 382 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 PCDHAC1Q9H158 963 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 MUC3BQ9H195 1237 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 FBRSL1Q9HCM7 1045 aaKnown RBP11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 PNPLA8Q9NP80 782 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 SEMA4BQ9NPR2 832 aaPredicted RBP11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 ABCC13Q9NSE7 274 aa11.06□□□□□ -0.64
DNMT3A-203ENST00000380746 FER1L6Q2WGJ9 1857 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 CEP290O15078 2479 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 ZCWPW2A0A1B0GU75 182 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 MBLAC1A4D2B0 266 aaPredicted RBP11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 NCAM2O15394 837 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 MTSS1O43312 755 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 MT-ND1P03886 318 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 CHRM3P20309 590 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 ATP6V1C1P21283 382 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 NPY2RP49146 381 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 UPP1Q16831 310 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 TRMT5Q32P41 509 aaKnown RBP11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 CCDC153Q494R4 210 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 TMCO2Q7Z6W1 182 aaPredicted RBP11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 TRPV1Q8NER1 839 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 BHLHE22Q8NFJ8 381 aaPredicted RBP11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 TM6SF2Q9BZW4 377 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 CCSER2Q9H7U1 834 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 RGS18Q9NS28 235 aa11.05□□□□□ -0.64
DNMT3A-203ENST00000380746 GKN1Q9NS71 199 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms